CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97519	Canola	vacuole	92.56	95.89
CDY37487	Canola	vacuole	88.1	91.27
CDY51739	Canola	vacuole	88.1	91.11
AT3G13790.1	Thale cress	vacuole	86.61	89.73
CDY23643	Canola	vacuole	59.5	67.92
CDX97518	Canola	endoplasmic reticulum, vacuole	63.64	67.31
CDY24053	Canola	vacuole	61.65	64.42
VIT_09s0002g02320.t01	Wine grape	vacuole	60.83	64.34
CDY33067	Canola	vacuole	61.32	64.08
KRH44130	Soybean	vacuole	58.02	62.23
KRH47104	Soybean	nucleus	57.02	61.17
KRH10019	Soybean	nucleus, vacuole	57.36	60.35
KRH23303	Soybean	nucleus	57.19	60.28
KRH44129	Soybean	vacuole	49.09	57.78
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	46.61	55.62
Solyc06g064620.2.1	Tomato	mitochondrion	48.43	52.32
CDX95352	Canola	vacuole	39.5	52.3
PGSC0003DMT400006639	Potato	vacuole	49.09	52.01
Solyc03g121680.1.1	Tomato	vacuole	48.43	51.31
CDY23227	Canola	vacuole	48.76	49.83
CDY43744	Canola	vacuole	48.26	49.32
CDX84575	Canola	vacuole	47.6	48.81
CDX79661	Canola	vacuole	47.44	48.64
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	43.14	47.98
CDX97155	Canola	peroxisome, plastid, vacuole	42.64	47.34
CDX70431	Canola	cytosol	13.88	47.19
CDX70432	Canola	cytosol	20.0	39.93
CDY46906	Canola	vacuole	40.99	37.92
CDY31826	Canola	vacuole	40.83	37.77
CDY39804	Canola	vacuole	39.34	37.72
CDY03265	Canola	vacuole	39.01	37.4
CDY30056	Canola	vacuole	39.34	36.12
CDX98080	Canola	cytosol, peroxisome, vacuole	39.5	36.1
CDY03264	Canola	cytosol, golgi, vacuole	35.54	35.48
CDY26548	Canola	vacuole	38.68	35.29
CDY39805	Canola	cytosol, golgi, plastid, vacuole	35.04	34.98
CDY15984	Canola	vacuole	38.68	34.41
CDX78455	Canola	cytosol	43.8	26.82
CDX70433	Canola	cytosol	7.6	8.42

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078GEB6	UniProt:A0A078GEB6	EnsemblPlants:CDY23644
ProteinID:CDY23644	ProteinID:CDY23644.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00023872001
InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251
PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
UniParc:UPI0004EDF4B7	SEG:seg	:	:	:	:

Description

BnaC05g39500DBnaC05g39500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEB6]

Coordinates

chrLK032145:-:606427..609566

Molecular Weight (calculated)

68654.3 Da

IEP (calculated)

9.232

GRAVY (calculated)

-0.493

Length

605 amino acids

Sequence
(BLAST)

001: MTKEVNSKIG VWLLFTLIIS NYVVDLEASH HVYKRLTQST NIKSPSVNQP YRTSFHFQPP KNWMNADPNG PMIYKGIYHL FYQWNPNGAV WGNIVWAHST
101: STDLINWDPH PAAIFPSEPF DIKGCWSGSA TILPDGKPVI LYTGIDPKNQ QVQNIAEPKN LSDPYLVEWT KSPLNPLMAP DAVNGINASS FRDPTTAWLG
201: HDNKWRVIIG SKIHRRGLAI TYTSKDLLKW EKSTEPLHYD DGSGMWECPD FFPVTRFGSK GVETSSFGEP NEVLKHVLKV SLDDTKHDYY TLGTYDRVGD
301: KFVPDKGFKM DSSAPRYDYG KYYASKTFYD SAKNRRILWG WTNESSSVED DVEKGWSGIQ TIPRKIWLDR SGKQLIQWPV REVERLRTNQ VNLRNKVLDS
401: RSRLEVYGVT AAQADVEVLF KVRDLEKADV IQPSWTDPQL ICSQMNVSVK SGLGPFGLMV LASKNLEEFT SVYFRIFKAR RNSNNYVVVM CSDQSRSSLK
501: EGNDKTTYGA FVDINPRQPL SLRALIDNSV VESFGGRGRA CITSRVYPKL AIGKGSHLYA FNYGSQSVDT EGGDTHTHTL DQKKKKKTHT HTRICISPFV
601: EHLII

Best Arabidopsis Sequence Match ( AT3G13790.1 )
(BLAST)

001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNDPNGP MIYKGIYHLF YQWNPKGAVW GNIVWAHSTS
101: TDLINWDPHP PAIFPSAPFD INGCWSGSAT ILPNGKPVIL YTGIDPKNQQ VQNIAEPKNL SDPYLREWKK SPLNPLMAPD AVNGINASSF RDPTTAWLGQ
201: DKKWRVIIGS KIHRRGLAIT YTSKDFLKWE KSPEPLHYDD GSGMWECPDF FPVTRFGSNG VETSSFGEPN EILKHVLKIS LDDTKHDYYT IGTYDRVKDK
301: FVPDNGFKMD GTAPRYDYGK YYASKTFFDS AKNRRILWGW TNESSSVEDD VEKGWSGIQT IPRKIWLDRS GKQLIQWPVR EVERLRTKQV KNLRNKVLKS
401: GSRLEVYGVT AAQADVEVLF KVRDLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVLM CSDQSRSSLK
501: EDNDKTTYGA FVDINPHQPL SLRALIDHSV VESFGGKGRA CITSRVYPKL AIGKSSHLFA FNYGYQSVDV LNLNAWSMNS AQIS

Arabidopsis Description

CWINV1Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Source:UniProtKB/Swiss-Prot;Acc:Q43866]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.