CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
vacuole 7
extracellular 5
endoplasmic reticulum 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44130	Soybean	vacuole	92.91	92.91
KRH44129	Soybean	vacuole	77.13	84.63
KRH10019	Soybean	nucleus, vacuole	80.14	78.61
KRH23303	Soybean	nucleus	78.19	76.83
VIT_09s0002g02320.t01	Wine grape	vacuole	66.49	65.56
AT3G13790.1	Thale cress	vacuole	64.89	62.67
Bra021508.1-P	Field mustard	vacuole	62.94	61.31
CDY51739	Canola	vacuole	63.48	61.2
CDY37487	Canola	vacuole	63.3	61.13
Bra027397.1-P	Field mustard	vacuole	62.77	61.03
CDX97519	Canola	vacuole	63.12	60.96
Bra027398.1-P	Field mustard	cytosol	51.06	58.42
CDY23643	Canola	vacuole	54.43	57.92
CDX97518	Canola	endoplasmic reticulum, vacuole	58.33	57.52
CDY23644	Canola	vacuole	61.17	57.02
AT1G55120.1	Thale cress	vacuole	59.93	56.9
CDY33067	Canola	vacuole	58.33	56.82
CDY24053	Canola	vacuole	58.33	56.82
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	51.06	56.8
PGSC0003DMT400006639	Potato	vacuole	57.45	56.74
Bra037980.1-P	Field mustard	vacuole	57.62	56.52
AT3G13784.2	Thale cress	vacuole	57.09	56.29
Solyc03g121680.1.1	Tomato	vacuole	56.56	55.87
KRH32774	Soybean	endoplasmic reticulum, vacuole	56.21	55.03
Solyc06g064620.2.1	Tomato	mitochondrion	54.08	54.46
KRH67945	Soybean	vacuole	51.42	54.31
KRG89524	Soybean	cytosol	40.43	54.29
KRG89527	Soybean	vacuole	52.84	53.69
KRH15569	Soybean	vacuole	54.79	53.65
KRG96203	Soybean	vacuole	52.66	53.61
KRH05441	Soybean	cytosol	51.95	53.08
KRH05439	Soybean	cytosol	51.77	51.96
KRG89530	Soybean	vacuole	42.38	51.62
KRG89522	Soybean	cytosol, nucleus, vacuole	28.37	51.12
KRH15559	Soybean	cytosol	30.14	48.16
KRH15564	Soybean	mitochondrion	16.31	41.63
KRH04082	Soybean	endoplasmic reticulum	44.5	38.91
KRH23803	Soybean	vacuole	42.2	38.76
KRH57351	Soybean	endoplasmic reticulum	44.33	38.76
KRH39981	Soybean	vacuole	43.09	38.57
KRH08807	Soybean	cytosol, nucleus, vacuole	14.54	38.5
KRH77397	Soybean	endoplasmic reticulum	44.5	37.19
KRH56348	Soybean	vacuole	42.38	37.0
KRH28036	Soybean	vacuole	40.6	37.0

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EntrezGene:547681
EMBL:ACUP02004135	EMBL:AJ563368	InterPro:ConA-like_dom_sf	EnsemblPlantsGene:GLYMA_07G008800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004564	GO:GO:0004575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	EnsemblPlants:KRH47104	ProteinID:KRH47104	ProteinID:KRH47104.1	PFAM:PF00251
PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF16	UniProt:Q7XA49	SMART:SM00640
SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM	UniParc:UPI00001BB298	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:647865..652858

Molecular Weight (calculated)

63523.4 Da

IEP (calculated)

9.006

GRAVY (calculated)

-0.311

Length

564 amino acids

Sequence
(BLAST)

001: MAMSTILLLT FFSFIYGSAA THHVYRNLQS LSSDSSNQPY RTAYHFQPPK NWINDPNGPL RYAGLYHLFY QYNPKGAVWG NIVWAHSVSK DLVNWTPLDP
101: AIFPSQPSDI NGCWSGSTTL LPGNKPVILY TGIDLLNQQV QNLAQPKNLS DPFLREWVKS PKNPLMAPTS ANKINSSSFR DPTTAWLGKD GHWRVLVGSK
201: RRTRGIAILY RSKDFVNWVQ AKHPLYSILG SGMWECPDFF PVLNNDQLGV DTSVNGYDVR HVLKVSLDDK KHDYYMIGSY NAAKDAFIPD EESNEFVLRY
301: DYGKYYASKT FFDDGKKRRI LLGWANESSS VAADIKKGWS GIHTIPRALW LHKSGKQLVQ WPVVEVEKLR AYPVNLPPQV LKGGKLLPIN GVTATQADVE
401: ISFEVSNLRE AEVLDYWTDP QILCSKKGSS IKSGLGPFGL LVFASEGLQE YTSVFFRIFR HQHKYLVLLC SDQSRSSLNK DNDLTSYGTF VDVDPLHEKL
501: SLRTLIDHSV VESFGGEGRA CITARVYPTL AINDEAQLYA FNNGTADVNI TKLNAWSMKK AQIN

Best Arabidopsis Sequence Match ( AT3G13790.1 )
(BLAST)

001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNDPNGP MIYKGIYHLF YQWNPKGAVW GNIVWAHSTS
101: TDLINWDPHP PAIFPSAPFD INGCWSGSAT ILPNGKPVIL YTGIDPKNQQ VQNIAEPKNL SDPYLREWKK SPLNPLMAPD AVNGINASSF RDPTTAWLGQ
201: DKKWRVIIGS KIHRRGLAIT YTSKDFLKWE KSPEPLHYDD GSGMWECPDF FPVTRFGSNG VETSSFGEPN EILKHVLKIS LDDTKHDYYT IGTYDRVKDK
301: FVPDNGFKMD GTAPRYDYGK YYASKTFFDS AKNRRILWGW TNESSSVEDD VEKGWSGIQT IPRKIWLDRS GKQLIQWPVR EVERLRTKQV KNLRNKVLKS
401: GSRLEVYGVT AAQADVEVLF KVRDLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVLM CSDQSRSSLK
501: EDNDKTTYGA FVDINPHQPL SLRALIDHSV VESFGGKGRA CITSRVYPKL AIGKSSHLFA FNYGYQSVDV LNLNAWSMNS AQIS

Arabidopsis Description

CWINV1Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Source:UniProtKB/Swiss-Prot;Acc:Q43866]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.