CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027398.1-P	Field mustard	cytosol	84.27	97.77
CDY23643	Canola	vacuole	87.59	94.53
AT3G13784.2	Thale cress	vacuole	81.99	81.99
CDY37487	Canola	vacuole	69.76	68.32
CDX97519	Canola	vacuole	69.76	68.32
CDY51739	Canola	vacuole	69.58	68.03
CDY24053	Canola	vacuole	66.96	66.15
CDY33067	Canola	vacuole	66.26	65.46
CDY23644	Canola	vacuole	67.31	63.64
VIT_09s0002g02320.t01	Wine grape	vacuole	59.44	59.44
KRH47104	Soybean	nucleus	57.52	58.33
KRH44130	Soybean	vacuole	57.52	58.33
KRH10019	Soybean	nucleus, vacuole	57.69	57.39
KRH23303	Soybean	nucleus	57.52	57.32
KRH44129	Soybean	vacuole	50.0	55.64
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	48.25	54.44
PGSC0003DMT400006639	Potato	vacuole	53.15	53.24
Solyc03g121680.1.1	Tomato	vacuole	52.62	52.71
Solyc06g064620.2.1	Tomato	mitochondrion	51.22	52.32
CDY23227	Canola	vacuole	49.3	47.64
CDY43744	Canola	vacuole	49.3	47.64
CDX95352	Canola	vacuole	37.76	47.26
CDX84575	Canola	vacuole	48.43	46.95
CDX79661	Canola	vacuole	48.43	46.95
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	44.23	46.51
CDX97155	Canola	peroxisome, plastid, vacuole	44.23	46.42
CDX70431	Canola	cytosol	13.81	44.38
CDX70432	Canola	cytosol	22.38	42.24
CDY39804	Canola	vacuole	41.43	37.56
CDY03265	Canola	vacuole	41.08	37.24
CDY46906	Canola	vacuole	41.96	36.7
CDY31826	Canola	vacuole	41.96	36.7
CDY30056	Canola	vacuole	41.26	35.81
CDX98080	Canola	cytosol, peroxisome, vacuole	41.08	35.5
CDY26548	Canola	vacuole	40.21	34.69
CDY03264	Canola	cytosol, golgi, vacuole	36.71	34.65
CDY39805	Canola	cytosol, golgi, plastid, vacuole	36.19	34.16
CDY15984	Canola	vacuole	40.03	33.68
CDX78455	Canola	cytosol	44.93	26.01
CDX70433	Canola	cytosol	8.22	8.61

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078EDX0
EnsemblPlants:CDX97518	ProteinID:CDX97518	ProteinID:CDX97518.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00104725001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244
ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
SignalP:SignalP-noTM	UniParc:UPI0004EF4026	SEG:seg	:	:	:

Description

BnaA05g25610D

Coordinates

chrLK031900:-:83035..85133

Molecular Weight (calculated)

64338.1 Da

IEP (calculated)

9.370

GRAVY (calculated)

-0.427

Length

572 amino acids

Sequence
(BLAST)

001: MADLLWCNTA IFLLASLFLA DNATNIEALK HSHSRITNQP YRTGYHFQPP KNWMNDPNGP MIYNGVYHLF YQWYPNGAVM KVNEIVWGHA TSKDLINWTP
101: HSPAIKPSRP SDINGCWSGS VTILPSGKPV ILYTGNDVNN RQVQNLAKPK NLSDPYLRHW TKSPVNPLVT PNAVNHINST SFRDPTTAWL GRNGRWRMIT
201: GSQEGRRGLA LLYTSRDFVS WKQSAKPLHY NDGSGMWECP DFFPVGTTTS HGVDTSSFSV SVKHVLKVSL SDTSHDYYTI GTYDQVRDQY VPDDGFVQDV
301: TAPRYDYGKF YASKTFYDSV NRRRILWGWV NESSPEKDNI KKGWAGLQAI PRKIWLDESG KRLMQWPVKE IERLRTTQVK WENKVLKGGG SLLDVHGVTA
401: SQADVEVLFK VSGLEKADVI EPGWTDPQLI CSQKNALSVN SGLGPFGLMV LASRNLEEYT SVYLRIFKAS QKSKDHVVVM CSDQSRSSLD KENDKTSYGA
501: FLDVSPYQPI SLRTLIDNSI VESFGGRGKT CITSRVYPKL AIGENTHLFV FNNGSQNVNV LSLSAWSMKS SL

Best Arabidopsis Sequence Match ( AT3G13784.2 )
(BLAST)

001: MANIVWCNIA MFLLVSLFLT DDAVVVLDAL DNVPNNIKNQ PYRTGYHFQP PKNWMNDPNG PMIYKGIYHL FYQWNQNGAV MDVNKTVWGH ATSTDLINWI
101: TLSPAIRPSR PSDINGCWSG SVTILPNGKP VILYTGNDRY NRQVQNLVKP KNLTDPYLRH WTKSPENPLV TPSPVNHINS SAFRDPTTAW FGRDGRWRIT
201: TGSQEGRRGL AILHTSKDFV IWKQSPKPLH YHDGTGMWEC PDFFPVARTD SRGLDTSFSS GPMVKHVLKV SLTDTFNDYY TIGTYDEVRD VYVPDKGFVQ
301: DETAPRYDYG KFYASKTFYD SVNQRRILWG WVNESSPEKD NIKKGWAGLQ AIPRKVWLDE SGKRLVQWPV KEIERLRTTQ VKWGNKLLKG GSVMEVHGVT
401: APQADVEVFF KVSGFDLEKA DVIEPGWTDP QLICSQRNAS SGLGPFGLMV LASKNMEEYT SVNIRIFRAG ENSKEHVVVM CSDQSTSSLE KGNDKTTYGA
501: FLDISPYQPI SLRTLIDKSI VESFGGKGKT CITSRVYPKL AIGERTHLFA FNKGSQNVNV LSLSAWSMKS SL

Arabidopsis Description

CWINV5Beta-fructofuranosidase, insoluble isoenzyme CWINV5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB9]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.