CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006130.1-P	Field mustard	cytosol	37.36	83.27
CDX78455	Canola	cytosol	75.27	41.6
CDX70432	Canola	cytosol	10.62	19.14
KRH15564	Soybean	mitochondrion	6.41	15.84
CDX97155	Canola	peroxisome, plastid, vacuole	12.82	12.84
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	12.27	12.32
KRH15559	Soybean	cytosol	7.33	11.33
VIT_04s0008g01150.t01	Wine grape	vacuole	10.07	9.63
CDY33067	Canola	vacuole	10.07	9.5
CDY24053	Canola	vacuole	9.71	9.15
CDX79661	Canola	vacuole	9.89	9.15
CDY43744	Canola	vacuole	9.89	9.12
CDY23227	Canola	vacuole	9.89	9.12
KRH05439	Soybean	cytosol	9.34	9.07
CDY23643	Canola	vacuole	8.79	9.06
KRH15569	Soybean	vacuole	9.52	9.03
CDX70431	Canola	cytosol	2.93	8.99
CDX84575	Canola	vacuole	9.71	8.98
CDX97519	Canola	vacuole	9.52	8.9
CDY51739	Canola	vacuole	9.52	8.89
KRH05441	Soybean	cytosol	8.97	8.88
CDY37487	Canola	vacuole	9.34	8.73
CDX97518	Canola	endoplasmic reticulum, vacuole	8.61	8.22
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	8.79	7.91
CDY23644	Canola	vacuole	8.42	7.6
CDY39805	Canola	cytosol, golgi, plastid, vacuole	7.88	7.1
CDY03264	Canola	cytosol, golgi, vacuole	7.88	7.1
CDY39804	Canola	vacuole	7.69	6.66
CDY46906	Canola	vacuole	7.88	6.57
CDY31826	Canola	vacuole	7.88	6.57
CDY03265	Canola	vacuole	7.51	6.5
CDY26548	Canola	vacuole	7.88	6.49
CDY30056	Canola	vacuole	7.69	6.37
CDX98080	Canola	cytosol, peroxisome, vacuole	7.69	6.34
CDY15984	Canola	vacuole	7.51	6.03
CDX95352	Canola	vacuole	3.11	3.72

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078C5Z5	EnsemblPlants:CDX70433	ProteinID:CDX70433
ProteinID:CDX70433.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00140244001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953
PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI0004EE906A	SEG:seg

Description

BnaC03g05170D

Coordinates

chrLK031791:+:388627..390956

Molecular Weight (calculated)

60897.4 Da

IEP (calculated)

4.798

GRAVY (calculated)

-0.368

Length

546 amino acids

Sequence
(BLAST)

001: MEAASCDEHG NFQPYRTSFH FQAHNNWLND PNGPLYYKGF YHLFYQHNPL NPFFGDIMVW GHSVSQDLVN WIKLEPALSP SVPSDINSCW SGSTTILPEG
101: KPVILYTGSD TNKHQVTVLA EPKDPSDPLL REWVKPKGNP VMVPPSNVPV DCFRDPTTAW QGHDGKWRAL VGAKEKDSNK GMAILYHSDD FVQWTKFLVP
201: LLESQVTGMW ECVDFFPVAV TGKEGLDTSV NNSSVRHVLK ASYGGNDCYV IGTYSSETDV FSADSEFTNT AEDLRYDYGN LFASKAFFDS AKNRRISWGW
301: IMERDSNEDD IVKGWAGIMA IPREIWLEKS GKKLMQWPVE EINNLRAKNV SLDSKQLEGG SILEISGITA SQADIEVAFD LPDLENDTEA LDSEEVDQAT
401: IIDGYSASVK GFYGPFGLLA LASNDLSEHT AIFFRVIRRG NGYAVLMCSD ESKSSLRDNI EKATLGTSLD IDPRHEKISL RCLIDHSVIE SYGGGGRSVI
501: TSRVYPKMAI GEEARLYVFN HGTKAVTMSS LEAWSMRKAQ INSNET

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.