CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24053	Canola	vacuole	96.89	96.89
AT1G55120.1	Thale cress	vacuole	87.22	85.02
CDX97518	Canola	endoplasmic reticulum, vacuole	65.46	66.26
CDY23643	Canola	vacuole	60.45	66.04
CDY51739	Canola	vacuole	66.67	65.98
CDY37487	Canola	vacuole	66.32	65.75
CDX97519	Canola	vacuole	65.8	65.24
VIT_09s0002g02320.t01	Wine grape	vacuole	61.49	62.24
CDY23644	Canola	vacuole	64.08	61.32
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	52.16	59.57
KRH44130	Soybean	vacuole	57.69	59.22
KRH23303	Soybean	nucleus	58.2	58.71
KRH10019	Soybean	nucleus, vacuole	58.03	58.43
KRH47104	Soybean	nucleus	56.82	58.33
KRH44129	Soybean	vacuole	51.12	57.59
Solyc06g064620.2.1	Tomato	mitochondrion	54.58	56.43
PGSC0003DMT400006639	Potato	vacuole	54.4	55.17
Solyc03g121680.1.1	Tomato	vacuole	53.37	54.12
CDX95352	Canola	vacuole	40.93	51.86
CDY23227	Canola	vacuole	51.12	50.0
CDY43744	Canola	vacuole	50.43	49.32
CDX97155	Canola	peroxisome, plastid, vacuole	46.11	48.99
CDX79661	Canola	vacuole	49.74	48.81
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	45.77	48.71
CDX84575	Canola	vacuole	49.57	48.64
CDX70431	Canola	cytosol	14.34	46.63
CDX70432	Canola	cytosol	22.11	42.24
CDY39804	Canola	vacuole	39.9	36.61
CDY46906	Canola	vacuole	41.11	36.39
CDY03265	Canola	vacuole	39.55	36.29
CDY31826	Canola	vacuole	40.93	36.24
CDY30056	Canola	vacuole	40.59	35.66
CDX98080	Canola	cytosol, peroxisome, vacuole	40.41	35.35
CDY26548	Canola	vacuole	40.07	34.99
CDY03264	Canola	cytosol, golgi, vacuole	35.58	33.99
CDY15984	Canola	vacuole	39.9	33.97
CDY39805	Canola	cytosol, golgi, plastid, vacuole	35.23	33.66
CDX78455	Canola	cytosol	47.15	27.63
CDX70433	Canola	cytosol	9.5	10.07

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078H6N1
UniProt:A0A078H6N1	EnsemblPlants:CDY33067	ProteinID:CDY33067	ProteinID:CDY33067.1	InterPro:ConA-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00053692001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953
PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM	UniParc:UPI0004EE0267
SEG:seg	:	:	:	:	:

Description

BnaC06g07120DBnaC06g07120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6N1]

Coordinates

chrLK032305:-:189083..191758

Molecular Weight (calculated)

65008.3 Da

IEP (calculated)

4.888

GRAVY (calculated)

-0.373

Length

579 amino acids

Sequence
(BLAST)

001: MGKTLLLLSL LLCSFIIDLE ASRQDLNQPY RTGYHFQPPS NWMNDPNGPM VYKGIYHLFY QYNPYGAVWD VRIVWGHSTS LDLVNWTPQP PAFSPSQPSD
101: INGCWSGSVT ILPNGTPVIL YTGIDQNKSQ VQNVAVPVNI SDPYLREWSK SPANPLMAPN AVNGINPDRF RDPTTAWIGH DGEWRVIVGS STDDRRGLAV
201: LYKSRDFFNW TQATKPLHHE ELTGMWECPD FFPVSITGTE GLETSSSGEV KHVLKMSLIE TLHDYYTIGC YDREKDVYVP DHGFVQDGSA PRLDYGKFYA
301: SKAFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLGESGNE LLQWPIEEIE TLRETQVNWY NKVLKAGSTI QVHGVTAAQQ ADVDVSFKVK
401: DLEKADVIEP SWTDPQKICS EEDLSVKSGL GPFGLMVLAS NDMEEYTSVY FRIFKSNDTK YVVLMCSDQS RSSLNEENDK ATFGAFVAID PSHETLSLRT
501: LIDHSIVESY GGGGKVCVTS RVYPKLAIGE KANLFVFNKG TQSVDVLSLS AWSLKSAQIN GETVSPFSEC EDSHSLNQY

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.