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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78905
CDX98596
CDX99411
CDY01565

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12240.1 CDX78905 AT4G19030.1 21798944
AT1G12240.1 CDX98596 AT4G19030.1 21798944
AT1G12240.1 CDX99411 AT4G19030.1 21798944
AT1G12240.1 CDY01565 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98080 Canola cytosol, peroxisome, vacuole 97.27 96.83
CDY26548 Canola vacuole 90.74 90.2
CDY15984 Canola vacuole 91.05 88.24
AT1G12240.1 Thale cress vacuole 88.47 87.8
CDY46906 Canola vacuole 79.21 79.82
CDY31826 Canola vacuole 78.6 79.2
CDY03265 Canola vacuole 75.11 78.45
CDY39804 Canola vacuole 74.96 78.29
CDY03264 Canola cytosol, golgi, vacuole 70.86 77.06
CDY39805 Canola cytosol, golgi, plastid, vacuole 70.71 76.9
VIT_02s0154g00090.t01 Wine grape vacuole 55.99 70.42
KRH57351 Soybean endoplasmic reticulum 63.43 64.81
KRH04082 Soybean endoplasmic reticulum 63.28 64.65
GSMUA_Achr11P... Banana mitochondrion, vacuole 50.23 62.34
GSMUA_Achr5P19880_001 Banana mitochondrion, vacuole 52.5 61.57
GSMUA_Achr1P11470_001 Banana peroxisome, plastid, vacuole 51.75 61.55
KRH77397 Soybean endoplasmic reticulum 62.52 61.04
KRH28036 Soybean vacuole 56.9 60.58
HORVU2Hr1G091990.6 Barley cytosol 22.31 60.0
PGSC0003DMT400012217 Potato cytosol, peroxisome, plastid, vacuole 58.27 58.81
Os04t0535600-01 Rice extracellular, mitochondrion, plasma membrane 58.27 58.54
Solyc08g079080.2.1 Tomato unclear 57.66 58.28
TraesCS2B01G403000.1 Wheat vacuole 56.6 56.6
TraesCS2A01G386100.2 Wheat plastid, vacuole 56.15 56.4
TraesCS2D01G382600.2 Wheat vacuole 56.3 55.96
Zm00001d002830_P001 Maize extracellular 56.3 55.62
Zm00001d025943_P001 Maize vacuole 55.84 55.01
Zm00001d054075_P001 Maize plastid, vacuole 44.16 53.1
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 54.02 52.82
Zm00001d014947_P001 Maize plasma membrane 53.72 52.6
Os02t0106100-01 Rice plasma membrane 52.81 52.57
TraesCS7D01G010000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 51.75 51.82
TraesCS7A01G010200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 51.59 51.75
TraesCS4A01G484800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 51.59 51.67
TraesCS4A01G485500.1 Wheat mitochondrion 39.61 51.28
TraesCS7D01G009300.1 Wheat mitochondrion 39.61 51.28
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 51.14 51.06
TraesCS6D01G026600.2 Wheat endoplasmic reticulum, peroxisome, vacuole 51.44 50.52
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 50.23 50.15
TraesCS6A01G023300.2 Wheat peroxisome, plastid, vacuole 50.99 49.93
TraesCS6B01G031700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 50.99 49.93
TraesCS6A01G023100.1 Wheat vacuole 50.83 49.7
TraesCS6B01G031300.1 Wheat peroxisome, plastid, vacuole 50.68 49.63
OQU82023 Sorghum plastid 52.96 49.57
TraesCS6D01G026300.2 Wheat peroxisome, plastid, vacuole 50.83 49.56
TraesCS6D01G026500.2 Wheat peroxisome, plastid, vacuole 50.83 49.41
TraesCS6B01G031600.1 Wheat peroxisome, plastid, vacuole 49.92 49.33
TraesCS6B01G031500.1 Wheat extracellular, peroxisome, vacuole 50.53 49.26
TraesCS6A01G023200.1 Wheat peroxisome, plastid, vacuole 50.08 49.25
TraesCS6D01G026400.1 Wheat peroxisome, plastid, vacuole 49.92 48.96
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 50.23 48.75
TraesCS7A01G009700.1 Wheat mitochondrion, plastid 44.46 48.11
TraesCS4A01G485000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 44.46 47.8
TraesCS4A01G485800.1 Wheat vacuole 46.74 47.53
HORVU7Hr1G000270.1 Barley mitochondrion 45.83 47.26
TraesCS7D01G008900.1 Wheat vacuole 46.43 47.22
TraesCS4A01G485900.1 Wheat cytosol, peroxisome, vacuole 46.13 46.91
TraesCS7A01G009400.1 Wheat vacuole 46.13 46.84
TraesCS7A01G009200.2 Wheat vacuole 45.98 46.76
TraesCS4A01G485400.2 Wheat golgi 43.7 46.75
HORVU0Hr1G018850.4 Barley vacuole 43.55 46.74
TraesCS7D01G008800.2 Wheat cytosol, plastid, vacuole 45.52 46.58
TraesCS7A01G060400.1 Wheat cytosol, peroxisome, plastid, vacuole 45.37 46.5
TraesCS7A01G009800.2 Wheat golgi, unclear 43.7 46.45
TraesCS7D01G009400.2 Wheat cytosol, plastid, vacuole 43.7 46.38
TraesCS7D01G008700.1 Wheat vacuole 46.59 46.37
TraesCS4A01G485600.1 Wheat mitochondrion, vacuole 45.68 46.31
TraesCS7A01G009100.1 Wheat endoplasmic reticulum, peroxisome, vacuole 46.43 46.29
TraesCS4A01G486000.1 Wheat golgi 46.59 46.23
TraesCS7D01G055000.1 Wheat plastid 45.07 46.19
TraesCS7A01G009600.3 Wheat mitochondrion 45.22 45.71
HORVU7Hr1G000250.3 Barley vacuole 45.37 45.51
TraesCS7D01G009700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 43.55 44.63
HORVU7Hr1G001040.6 Barley plastid 44.61 44.08
TraesCS7A01G009500.3 Wheat plastid 43.25 44.05
TraesCS4A01G485700.1 Wheat cytosol, mitochondrion, peroxisome, plastid, vacuole 43.7 43.18
CDX95352 Canola vacuole 29.89 43.11
CDY51739 Canola vacuole 38.24 43.08
CDY37487 Canola vacuole 38.09 42.98
TraesCS7D01G009100.1 Wheat cytosol, mitochondrion, peroxisome, vacuole 43.55 42.9
TraesCS7D01G054800.3 Wheat mitochondrion, vacuole 45.37 42.65
HORVU7Hr1G000260.1 Barley plastid 46.74 42.54
TraesCS7A01G060300.2 Wheat mitochondrion 45.07 42.31
CDX97519 Canola vacuole 37.18 41.95
CDX97518 Canola endoplasmic reticulum, vacuole 35.81 41.26
CDY23227 Canola vacuole 37.03 41.22
CDY23643 Canola vacuole 32.93 40.94
CDY24053 Canola vacuole 35.66 40.59
CDY33067 Canola vacuole 35.66 40.59
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 15.93 40.54
CDX69719 Canola mitochondrion, peroxisome, plastid, vacuole 33.08 40.07
CDX79661 Canola vacuole 35.66 39.83
CDX97155 Canola peroxisome, plastid, vacuole 32.93 39.82
CDY43744 Canola vacuole 35.66 39.7
CDY23644 Canola vacuole 36.12 39.34
CDX84575 Canola vacuole 35.2 39.32
TraesCS7D01G009200.2 Wheat cytosol, mitochondrion, plasma membrane, plastid, vacuole 44.92 39.15
CDX70431 Canola cytosol 10.32 38.2
CDX70432 Canola cytosol 15.93 34.65
CDX78455 Canola cytosol 33.38 22.27
CDX70433 Canola cytosol 6.37 7.69
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2GO:A0A078GX32
UniProt:A0A078GX32InterPro:Beta-fructofuranosidaseEnsemblPlants:CDY30056ProteinID:CDY30056ProteinID:CDY30056.1InterPro:ConA-like_dom_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004564GO:GO:0004575GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00044603001InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296PFAM:PF00251PFAM:PF08244PFAM:PF11837ScanProsite:PS00609
PANTHER:PTHR31953PANTHER:PTHR31953:SF31SMART:SM00640SUPFAM:SSF49899SUPFAM:SSF75005TMHMM:TMhelix
UniParc:UPI0004EF321C:::::
Description
BnaC05g09640DBnaC05g09640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX32]
Coordinates
chrLK032248:+:283404..287446
Molecular Weight (calculated)
73123.2 Da
IEP (calculated)
6.405
GRAVY (calculated)
-0.274
Length
659 amino acids
Sequence
(BLAST)
001: MASSDALLPI SAREEDPLLS DGSRSDPNAE THGRRRPVKG LLAVSFGLFF IAFYVALIAT HDGSRSNDVK IESDGTATTV SRAHLAGVSE KSNDQLWKLS
101: GDRNTVAFSW NNSMLSWQRT AFHFQPEQNW MNDPNGPLFY KGWYHFFYQY NPNAAVWGDI VWGHAVSKDL IHWVHLPLAM VADQWYDANG VWTGSATFLE
201: DGSIVMLYTG STDKSVQVQN LAYPEDLNDP LLLKWVKFPG NPVLVPPPGI LPKDFRDPTT AWKTSAGKWR ITIGSKINRT GISLVYDTTD FKTYEKLETL
301: LHKVPNTGMW ECVDFYPVSK TLVKGLDTSV NGPDVKHIVK ASMDDTRIDH YAIGTYFDSN GTWTPDDPTI DVGISTSLRY DYGKFYASKT FYDQNKGRRI
401: LWGWIGESDS ESADVQKGWS SLQGIPRTVV LDTKTGKNLV QWPVEEVKSL RLSSKKFDME VGPGSLVHID VGSAAQLDIE AEFEIKKESL DKILGDASAT
501: EEFSCQKSGG STVRGALGPF GFSVLAHESL SEQTPVYFYV AKGKDSKLTT FFCADSSRSS FANDVVKPIY GSSVPVLKGE KLTMRILVDH SIVEAFGQGG
601: RTCITSRVYP TKAIYGAAKL FLFNNAIDAT ITASFKVWQM NSAFIQPYSE EAVRALSRT
Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)
001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT
Arabidopsis Description
BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.