Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 4
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g071920.2.1 | |
| Solyc03g005980.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12240.1 | Solyc02g071920.2.1 | AT4G19030.1 | 21798944 |
| AT1G12240.1 | Solyc03g005980.2.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012217 | Potato | cytosol, peroxisome, plastid, vacuole | 94.79 | 94.64 |
| VIT_02s0154g00090.t01 | Wine grape | vacuole | 53.99 | 67.18 |
| HORVU2Hr1G091990.6 | Barley | cytosol | 23.93 | 63.67 |
| GSMUA_Achr11P... | Banana | mitochondrion, vacuole | 51.23 | 62.9 |
| KRH57351 | Soybean | endoplasmic reticulum | 61.2 | 61.86 |
| KRH04082 | Soybean | endoplasmic reticulum | 61.2 | 61.86 |
| GSMUA_Achr5P19880_001 | Banana | mitochondrion, vacuole | 52.91 | 61.39 |
| KRH77397 | Soybean | endoplasmic reticulum | 62.42 | 60.3 |
| KRH28036 | Soybean | vacuole | 57.21 | 60.26 |
| GSMUA_Achr1P11470_001 | Banana | peroxisome, plastid, vacuole | 50.31 | 59.21 |
| Os04t0535600-01 | Rice | extracellular, mitochondrion, plasma membrane | 58.74 | 58.38 |
| CDY39804 | Canola | vacuole | 56.44 | 58.32 |
| AT1G62660.1 | Thale cress | vacuole | 57.67 | 58.02 |
| CDY03265 | Canola | vacuole | 56.13 | 58.0 |
| CDY26548 | Canola | vacuole | 58.9 | 57.92 |
| AT1G12240.1 | Thale cress | vacuole | 58.9 | 57.83 |
| CDY30056 | Canola | vacuole | 58.28 | 57.66 |
| TraesCS2B01G403000.1 | Wheat | vacuole | 57.67 | 57.06 |
| CDX98080 | Canola | cytosol, peroxisome, vacuole | 57.82 | 56.95 |
| Solyc03g083910.2.1 | Tomato | extracellular | 56.6 | 56.94 |
| Bra019749.1-P | Field mustard | nucleus, peroxisome, vacuole | 57.67 | 56.8 |
| Bra036653.1-P | Field mustard | vacuole | 57.06 | 56.79 |
| TraesCS2D01G382600.2 | Wheat | vacuole | 57.52 | 56.56 |
| TraesCS2A01G386100.2 | Wheat | plastid, vacuole | 56.9 | 56.55 |
| CDY15984 | Canola | vacuole | 58.9 | 56.47 |
| CDY46906 | Canola | vacuole | 56.6 | 56.42 |
| Bra027030.1-P | Field mustard | vacuole | 56.44 | 56.27 |
| CDY31826 | Canola | vacuole | 56.29 | 56.12 |
| Bra026984.1-P | Field mustard | vacuole | 58.9 | 55.65 |
| CDY03264 | Canola | cytosol, golgi, vacuole | 50.61 | 54.46 |
| Bra036652.1-P | Field mustard | cytosol, golgi, plastid, vacuole | 49.69 | 54.18 |
| CDY39805 | Canola | cytosol, golgi, plastid, vacuole | 50.0 | 53.8 |
| Zm00001d002830_P001 | Maize | extracellular | 54.91 | 53.67 |
| Zm00001d014947_P001 | Maize | plasma membrane | 55.37 | 53.64 |
| OQU84152 | Sorghum | endoplasmic reticulum, peroxisome, plastid, vacuole | 55.06 | 53.26 |
| Zm00001d025943_P001 | Maize | vacuole | 54.6 | 53.21 |
| Zm00001d054075_P001 | Maize | plastid, vacuole | 44.63 | 53.1 |
| TraesCS7A01G010200.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 52.76 | 52.36 |
| TraesCS7D01G010000.2 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 52.76 | 52.28 |
| HORVU6Hr1G004000.2 | Barley | endoplasmic reticulum, peroxisome, vacuole | 52.91 | 52.27 |
| TraesCS4A01G485500.1 | Wheat | mitochondrion | 40.8 | 52.26 |
| TraesCS7D01G009300.1 | Wheat | mitochondrion | 40.8 | 52.26 |
| Os02t0106100-01 | Rice | plasma membrane | 52.91 | 52.11 |
| TraesCS4A01G484800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 52.45 | 51.98 |
| TraesCS6A01G023100.1 | Wheat | vacuole | 53.37 | 51.63 |
| TraesCS6B01G031600.1 | Wheat | peroxisome, plastid, vacuole | 52.76 | 51.57 |
| HORVU7Hr1G001070.1 | Barley | cytosol, peroxisome, vacuole | 51.99 | 51.36 |
| TraesCS6D01G026300.2 | Wheat | peroxisome, plastid, vacuole | 53.22 | 51.33 |
| TraesCS6A01G023200.1 | Wheat | peroxisome, plastid, vacuole | 52.61 | 51.19 |
| TraesCS6D01G026600.2 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 52.61 | 51.12 |
| TraesCS6D01G026400.1 | Wheat | peroxisome, plastid, vacuole | 52.61 | 51.04 |
| TraesCS6B01G031700.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 52.45 | 50.82 |
| TraesCS6B01G031500.1 | Wheat | extracellular, peroxisome, vacuole | 52.61 | 50.74 |
| TraesCS6A01G023300.2 | Wheat | peroxisome, plastid, vacuole | 52.3 | 50.67 |
| TraesCS6D01G026500.2 | Wheat | peroxisome, plastid, vacuole | 52.61 | 50.59 |
| TraesCS6B01G031300.1 | Wheat | peroxisome, plastid, vacuole | 52.15 | 50.52 |
| HORVU6Hr1G004010.8 | Barley | peroxisome, plastid, vacuole | 52.3 | 50.22 |
| HORVU7Hr1G000270.1 | Barley | mitochondrion | 48.01 | 48.98 |
| TraesCS7A01G009700.1 | Wheat | mitochondrion, plastid | 45.55 | 48.77 |
| TraesCS7A01G009400.1 | Wheat | vacuole | 48.47 | 48.69 |
| TraesCS4A01G485800.1 | Wheat | vacuole | 48.31 | 48.61 |
| TraesCS4A01G485400.2 | Wheat | golgi | 45.86 | 48.54 |
| HORVU0Hr1G018850.4 | Barley | vacuole | 45.71 | 48.53 |
| TraesCS7A01G009100.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 49.08 | 48.41 |
| TraesCS7D01G008700.1 | Wheat | vacuole | 48.93 | 48.19 |
| TraesCS7D01G008900.1 | Wheat | vacuole | 47.85 | 48.15 |
| TraesCS7D01G055000.1 | Wheat | plastid | 47.39 | 48.06 |
| TraesCS4A01G486000.1 | Wheat | golgi | 48.93 | 48.04 |
| TraesCS7D01G009400.2 | Wheat | cytosol, plastid, vacuole | 45.71 | 47.99 |
| TraesCS4A01G485000.2 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 44.94 | 47.8 |
| TraesCS7A01G060400.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 47.09 | 47.74 |
| TraesCS7A01G009800.2 | Wheat | golgi, unclear | 45.4 | 47.74 |
| TraesCS7D01G008800.2 | Wheat | cytosol, plastid, vacuole | 46.78 | 47.36 |
| OQU82023 | Sorghum | plastid | 51.07 | 47.3 |
| TraesCS7A01G009200.2 | Wheat | vacuole | 46.93 | 47.22 |
| TraesCS4A01G485600.1 | Wheat | mitochondrion, vacuole | 46.63 | 46.77 |
| TraesCS4A01G485900.1 | Wheat | cytosol, peroxisome, vacuole | 46.47 | 46.76 |
| HORVU7Hr1G000250.3 | Barley | vacuole | 47.09 | 46.73 |
| TraesCS7A01G009600.3 | Wheat | mitochondrion | 46.63 | 46.63 |
| TraesCS7A01G009500.3 | Wheat | plastid | 45.09 | 45.44 |
| TraesCS7D01G009700.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 44.79 | 45.41 |
| HORVU7Hr1G001040.6 | Barley | plastid | 45.71 | 44.68 |
| HORVU7Hr1G000260.1 | Barley | plastid | 49.54 | 44.61 |
| TraesCS4A01G485700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid, vacuole | 45.4 | 44.38 |
| TraesCS7D01G009100.1 | Wheat | cytosol, mitochondrion, peroxisome, vacuole | 44.79 | 43.65 |
| TraesCS7D01G054800.3 | Wheat | mitochondrion, vacuole | 46.78 | 43.51 |
| Solyc10g083290.1.1 | Tomato | extracellular | 38.8 | 43.47 |
| Solyc10g085360.1.1 | Tomato | nucleus | 37.88 | 42.96 |
| TraesCS7A01G060300.2 | Wheat | mitochondrion | 46.01 | 42.73 |
| Solyc03g121680.1.1 | Tomato | vacuole | 36.66 | 41.86 |
| Solyc06g064620.2.1 | Tomato | mitochondrion | 35.58 | 41.43 |
| HORVU0Hr1G018840.1 | Barley | cytosol, plastid, vacuole | 16.26 | 40.93 |
| Solyc08g045720.1.1 | Tomato | extracellular | 9.2 | 40.82 |
| Solyc09g010080.2.1 | Tomato | vacuole | 36.5 | 40.75 |
| Solyc10g085650.1.1 | Tomato | unclear | 35.89 | 40.7 |
| Solyc10g083300.1.1 | Tomato | nucleus | 36.66 | 40.58 |
| Solyc09g010090.2.1 | Tomato | vacuole | 36.04 | 40.31 |
| TraesCS7D01G009200.2 | Wheat | cytosol, mitochondrion, plasma membrane, plastid, vacuole | 46.63 | 40.21 |
| Solyc10g085640.1.1 | Tomato | unclear | 33.9 | 39.68 |
Protein Annotations
| KEGG:00052+3.2.1.26 | KEGG:00500+3.2.1.26 | Gene3D:2.115.10.20 | Gene3D:2.60.120.560 | MapMan:3.1.4.1.2 | InterPro:Beta-fructofuranosidase |
| InterPro:ConA-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004564 | GO:GO:0004575 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016798 | InterPro:Glyco_hydro_32 | InterPro:Glyco_hydro_32_AS | InterPro:Glyco_hydro_32_C | InterPro:Glyco_hydro_32_N |
| InterPro:Glyco_hydro_beta-prop_sf | InterPro:IPR023296 | UniProt:K4CNR7 | PFAM:PF00251 | PFAM:PF08244 | PFAM:PF11837 |
| ScanProsite:PS00609 | PANTHER:PTHR31953 | PANTHER:PTHR31953:SF31 | SMART:SM00640 | SUPFAM:SSF49899 | SUPFAM:SSF75005 |
| EnsemblPlantsGene:Solyc08g079080.2 | EnsemblPlants:Solyc08g079080.2.1 | TMHMM:TMhelix | UniParc:UPI000276AF12 | : | : |
Description
No Description!
Coordinates
chr8:+:62722555..62726754
Molecular Weight (calculated)
72792.3 Da
IEP (calculated)
6.652
GRAVY (calculated)
-0.325
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIPNSETNN GVPYTHLPES DNDSGNTPAR CRKTNRSTFI ILTGLVAFLL FFVAVKYGNN DGTDDIIPGP VPPHETVCNM IGSNLMPLTT MRTVARGVEE
101: GVSAKSHGHF LGVRPFPWTQ KMLAWQRTSF HFQPKKNWMN DPNGPLYYKG WYHLFYQYNP EAAVWGNIVW GHAVSRDLIH WQHLPVAMVA DQWYDINGVW
201: TGSATFLPNG DLIMLYTGST NESIQVQNLA YPADPSDPLL RKWIKYEGNP VLIPPPGIGL KDFRDPTTAW TTPEGKWRIT IGSKINKTGI SLVYDTIDFK
301: KFELLKGMLH GVPGTGMWEC VDFYPVSKIA ENGLDTSENG PAVKHVLKSS LDDDRNDYYA LGTYNAGAGK WVPDNPIIDV GIGLRYDYGN FYASKSFYDQ
401: EKKRRVLWAW IKETDSEAAD ICRGWASLQP IPRTIQYDKK TGSNLITWPV AEVDNLRSNN NEFNKVVVKP GSIVPLEVGS ATQLDIMAEF EVDQNMLKKV
501: DGSNATYDCI KSGGSGERGA LGPFGLLVLT DNSLSEQTPI YFYIAKDLTG NFNTFFCNDL TRSSEASDVR KLIYGSTVPV LQGEKLSLRT LVDHSIVESF
601: AQNGRTAITS RVYPTKAIYE NAKIYLFNNA TDISVTATIK IWQMNSANIK SN
101: GVSAKSHGHF LGVRPFPWTQ KMLAWQRTSF HFQPKKNWMN DPNGPLYYKG WYHLFYQYNP EAAVWGNIVW GHAVSRDLIH WQHLPVAMVA DQWYDINGVW
201: TGSATFLPNG DLIMLYTGST NESIQVQNLA YPADPSDPLL RKWIKYEGNP VLIPPPGIGL KDFRDPTTAW TTPEGKWRIT IGSKINKTGI SLVYDTIDFK
301: KFELLKGMLH GVPGTGMWEC VDFYPVSKIA ENGLDTSENG PAVKHVLKSS LDDDRNDYYA LGTYNAGAGK WVPDNPIIDV GIGLRYDYGN FYASKSFYDQ
401: EKKRRVLWAW IKETDSEAAD ICRGWASLQP IPRTIQYDKK TGSNLITWPV AEVDNLRSNN NEFNKVVVKP GSIVPLEVGS ATQLDIMAEF EVDQNMLKKV
501: DGSNATYDCI KSGGSGERGA LGPFGLLVLT DNSLSEQTPI YFYIAKDLTG NFNTFFCNDL TRSSEASDVR KLIYGSTVPV LQGEKLSLRT LVDHSIVESF
601: AQNGRTAITS RVYPTKAIYE NAKIYLFNNA TDISVTATIK IWQMNSANIK SN
001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT
Arabidopsis Description
BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.