Factsheet for HORVU6Hr1G004000.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, peroxisome

Predictor Summary:

nucleus 1
vacuole 4
extracellular 1
endoplasmic reticulum 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, vacuole
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12240.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	92.42	91.45
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	92.27	90.9
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	92.12	90.48
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	88.79	86.3
Os02t0106100-01	Rice	plasma membrane	73.48	73.26
Zm00001d014947_P001	Maize	plasma membrane	74.24	72.81
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	73.18	71.66
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	69.85	69.85
Zm00001d054075_P001	Maize	plastid, vacuole	57.42	69.16
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	53.64	63.9
HORVU0Hr1G018850.4	Barley	vacuole	57.27	61.56
HORVU7Hr1G000250.3	Barley	vacuole	60.76	61.03
HORVU7Hr1G000270.1	Barley	mitochondrion	59.09	61.03
HORVU2Hr1G091990.6	Barley	cytosol	21.82	58.78
VIT_16s0022g00670.t01	Wine grape	cytosol	47.73	58.66
VIT_02s0154g00090.t01	Wine grape	vacuole	46.06	58.02
HORVU7Hr1G000260.1	Barley	plastid	62.88	57.32
HORVU7Hr1G001040.6	Barley	plastid	57.88	57.27
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	22.42	57.14
KRH57351	Soybean	endoplasmic reticulum	52.42	53.64
KRH04082	Soybean	endoplasmic reticulum	52.42	53.64
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	52.73	53.29
PGSC0003DMT400035987	Potato	cytosol, extracellular	51.52	53.21
KRH28036	Soybean	vacuole	49.7	52.99
Solyc08g079080.2.1	Tomato	unclear	52.27	52.91
Solyc03g083910.2.1	Tomato	extracellular	51.52	52.47
CDY39804	Canola	vacuole	49.09	51.35
KRH77397	Soybean	endoplasmic reticulum	52.42	51.26
CDY03265	Canola	vacuole	48.48	50.71
AT1G62660.1	Thale cress	vacuole	49.55	50.46
CDY03264	Canola	cytosol, golgi, vacuole	46.21	50.33
CDY30056	Canola	vacuole	50.15	50.23
KRH23803	Soybean	vacuole	46.67	50.16
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	50.15	50.0
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	45.3	50.0
CDY31826	Canola	vacuole	49.39	49.85
Bra036653.1-P	Field mustard	vacuole	49.39	49.77
CDX98080	Canola	cytosol, peroxisome, vacuole	49.85	49.7
Bra027030.1-P	Field mustard	vacuole	49.24	49.69
CDY46906	Canola	vacuole	49.24	49.69
KRH39981	Soybean	vacuole	47.42	49.68
CDY39805	Canola	cytosol, golgi, plastid, vacuole	45.61	49.67
AT1G12240.1	Thale cress	vacuole	49.7	49.4
CDY26548	Canola	vacuole	49.09	48.87
KRH56348	Soybean	vacuole	47.27	48.3
CDY15984	Canola	vacuole	48.79	47.35
Bra026984.1-P	Field mustard	vacuole	49.09	46.96
HORVU4Hr1G011000.1	Barley	vacuole	37.42	42.37
HORVU2Hr1G109080.7	Barley	cytosol, peroxisome, vacuole	33.33	40.44
HORVU1Hr1G086890.7	Barley	vacuole	34.85	39.93
HORVU2Hr1G109200.2	Barley	vacuole	12.73	39.81
HORVU5Hr1G123930.2	Barley	vacuole	34.85	39.52
HORVU2Hr1G071180.1	Barley	cytosol	11.36	39.47
HORVU4Hr1G086300.2	Barley	plastid, vacuole	36.36	39.34
HORVU2Hr1G109120.7	Barley	vacuole	35.15	39.12
HORVU3Hr1G005350.4	Barley	golgi, vacuole	34.7	38.95
HORVU2Hr1G118820.1	Barley	cytosol	31.06	38.61
HORVU3Hr1G113100.14	Barley	vacuole	33.94	38.03
HORVU2Hr1G118790.15	Barley	vacuole	33.79	37.67
HORVU6Hr1G011260.19	Barley	vacuole	31.82	34.71
HORVU5Hr1G124030.19	Barley	cytosol	30.0	34.43
HORVU3Hr1G097050.5	Barley	mitochondrion, vacuole	8.03	34.42
HORVU2Hr1G109210.1	Barley	cytosol, extracellular	7.42	34.27
HORVU5Hr1G123970.5	Barley	plastid	30.45	34.24
HORVU1Hr1G048510.4	Barley	cytosol	11.36	33.78
HORVU6Hr1G012550.8	Barley	golgi	32.42	33.75
HORVU2Hr1G073210.3	Barley	vacuole	14.24	33.33
HORVU6Hr1G080230.1	Barley	cytosol	5.76	32.48
HORVU0Hr1G014400.1	Barley	vacuole	21.97	29.0
HORVU3Hr1G005360.1	Barley	mitochondrion, plastid	12.12	27.59
HORVU7Hr1G020410.2	Barley	cytosol	5.0	24.63
HORVU2Hr1G109240.2	Barley	vacuole	12.73	19.49
HORVU2Hr1G091910.5	Barley	cytosol	10.91	12.95

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	InterPro:Beta-fructofuranosidase
InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564	GO:GO:0004575
GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
EnsemblPlantsGene:HORVU6Hr1G004000	EnsemblPlants:HORVU6Hr1G004000.2	InterPro:IPR023296	UniProt:M0XIN7	PFAM:PF00251	PFAM:PF08244
PFAM:PF11837	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF10	SMART:SM00640	SUPFAM:SSF49899
SUPFAM:SSF75005	TMHMM:TMhelix	UniParc:UPI00029487B5	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:8756638..8760033

Molecular Weight (calculated)

72051.5 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.284

Length

660 amino acids

Sequence
(BLAST)

001: MPTMDTTDRG SYAQLPDDAE AGTAHRRRTG PLCAAILLTS AALLLAVAAL AGQLPVAGVI MSGQPTTVDV APTTSTSSRG PEYGVSEKTS GAGAHGGMLG
101: ADAGNAFPWS NAMLQWQRTG FHFQPEKNWM NDPNGPVYYK GWYHLFYQYN PDGAIWGNKI AWGHAASRDL LRWRHLPVAM SPDQWYDING VWSGSATVLP
201: DGRIVMLYTG STNASVQVQC LAFPTDPSDP LLINWTKYEN NPVMYPPPGV GEKDFRDPTT AWFDGSDDTW RLVIGSKDDR HAGMVMTYKT KDFIDYELVP
301: GLLHRVPGTG MWECIDLYPV GGVRGIDMTE AVAAASANGG DDVLHVMKES SDDDRHDYYA LGRYDAAKNT WTPLDVDADL GIGLRYDWGK FYASKTFYDP
401: AKKRRVLWGW VGETDSERAD VAKGWASLQS TPRTVVLDTK TGSNLLQWPV DEVETLRTNS TDLGGVTIDR GSVFALNLHR ATQLDIEASF RIDQLDIAAS
501: NEADVGYNCS TSGGATGRGM LGPFGLLVLA DARRHGGDAE RTAVYFYVAR GLDGGLHTHF CHDETRSSHA NDIVKRVVGN TVPVLDGEEL SVRVLVDHSI
601: VESFAMGGRL TATSRVYPTE AIYANAGVYL FNNATGIRVT TTRLVVHEMD SSYNQAYMAL

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.