Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
TargetP:secretory
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G216800.1 Wheat mitochondrion 61.9 91.92
TraesCS3D01G015900.1 Wheat cytosol 84.35 91.85
TraesCSU01G175300.1 Wheat vacuole 82.31 91.67
TraesCSU01G173900.1 Wheat vacuole 82.31 91.67
TraesCS3B01G054100.1 Wheat cytosol 15.82 91.18
TraesCS3B01G028500.1 Wheat vacuole 89.12 89.88
TraesCSU01G250400.1 Wheat cytosol 15.48 89.22
TraesCS3A01G029700.1 Wheat cytosol 50.17 88.86
TraesCS3B01G028200.1 Wheat cytosol 15.31 88.24
HORVU5Hr1G123930.2 Barley vacuole 84.35 85.22
TraesCS3B01G028100.1 Wheat vacuole 50.85 78.89
Os04t0413200-01 Rice plasma membrane 77.89 78.16
Zm00001d025355_P001 Maize vacuole 74.83 74.96
OQU81519 Sorghum vacuole 73.13 71.91
GSMUA_Achr6P13160_001 Banana vacuole 63.44 63.76
HORVU4Hr1G011000.1 Barley vacuole 61.56 62.09
GSMUA_AchrUn_... Banana vacuole 56.29 60.73
GSMUA_Achr4P29900_001 Banana golgi, vacuole 57.99 58.29
HORVU4Hr1G086300.2 Barley plastid, vacuole 60.03 57.87
HORVU1Hr1G086890.7 Barley vacuole 54.59 55.73
GSMUA_Achr10P... Banana vacuole 13.1 53.1
HORVU2Hr1G118820.1 Barley cytosol 43.71 48.4
HORVU2Hr1G109210.1 Barley cytosol, extracellular 11.56 47.55
HORVU2Hr1G109080.7 Barley cytosol, peroxisome, vacuole 43.54 47.06
HORVU2Hr1G109120.7 Barley vacuole 47.11 46.71
HORVU3Hr1G113100.14 Barley vacuole 46.77 46.69
HORVU6Hr1G080230.1 Barley cytosol 9.18 46.15
HORVU2Hr1G091990.6 Barley cytosol 19.22 46.12
HORVU2Hr1G118790.15 Barley vacuole 46.26 45.95
HORVU2Hr1G073210.3 Barley vacuole 21.43 44.68
HORVU5Hr1G124030.19 Barley cytosol 43.54 44.52
HORVU2Hr1G071180.1 Barley cytosol 13.95 43.16
HORVU6Hr1G012550.8 Barley golgi 46.43 43.06
HORVU2Hr1G109200.2 Barley vacuole 15.31 42.65
HORVU6Hr1G011260.19 Barley vacuole 43.54 42.31
HORVU5Hr1G123970.5 Barley plastid 41.5 41.57
HORVU3Hr1G005360.1 Barley mitochondrion, plastid 20.07 40.69
HORVU1Hr1G048510.4 Barley cytosol 14.46 38.29
HORVU3Hr1G097050.5 Barley mitochondrion, vacuole 9.52 36.36
HORVU0Hr1G014400.1 Barley vacuole 30.44 35.8
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 38.95 34.7
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 38.44 34.24
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 14.8 33.59
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 38.78 33.58
HORVU0Hr1G018850.4 Barley vacuole 34.52 33.06
HORVU7Hr1G000270.1 Barley mitochondrion 35.54 32.71
HORVU7Hr1G000250.3 Barley vacuole 35.2 31.51
HORVU7Hr1G001040.6 Barley plastid 35.03 30.88
HORVU7Hr1G020410.2 Barley cytosol 6.63 29.1
HORVU7Hr1G000260.1 Barley plastid 35.71 29.01
HORVU2Hr1G109240.2 Barley vacuole 19.73 26.91
HORVU2Hr1G091910.5 Barley cytosol 8.67 9.17
Protein Annotations
Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.1UniProt:A0A287K012InterPro:ConA-like_dom_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfEnsemblPlantsGene:HORVU3Hr1G005350
EnsemblPlants:HORVU3Hr1G005350.4InterPro:IPR023296PFAM:PF00251PFAM:PF08244PANTHER:PTHR31953PANTHER:PTHR31953:SF11
SMART:SM00640SUPFAM:SSF49899SUPFAM:SSF75005SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B46709B
Description
No Description!
Coordinates
chrchr3H:-:13177338..13179975
Molecular Weight (calculated)
66640.1 Da
IEP (calculated)
8.484
GRAVY (calculated)
-0.342
Length
588 amino acids
Sequence
(BLAST)
001: REEMGTAAAL AIVSVLCWAA LAAVRGSHVV YPELQSLEAK EVATELRTGY HFQPPKHWIN GIAGPMYYKG LYHLFYQYNP KGAVWGNIIW AHSVSTDLIH
101: WVALQPAIYP TRPFDVNGCW SGSVTMLPNG VPVIMYTGID PHKHQVQNVA YPANLSDPFL REWVKPDYNP IIIPDRDINA SAFRDPTTAW YGPDGHWRLV
201: VGSKENMRGT AVLYRSRDFK KWIKARHSLH AGLTGMWECP DFFPVAVAGG SRHHQSGVDT AELHNRVVAE EVKYVLKVSL ELTRYDYYTV GTYDHDKERY
301: TPDPAFPDND YGLRYDYGDF YASKSFFDPA KKRRVLWGWA NESDTVVDDQ HKGWAGIQAM PRKIFLSRSG AQLIQWPVEE VKSLRAKHVN VSNKAIKSGK
401: YFEVTGFKSV QSDMEAVFVI RNLDKAEKFD PSWRTNAQGL CKNFNSHVKG GVGPFGLWVL ASDDLEERTA VFFRVFKTND TNYVVLMCND PTRSSYESQI
501: YRPTFAGFVN VDIAKTKTIT LRTLIDHSVV ESFGAGGRTC ILTRVYPKKA IGDDAHLFVF NNGESDIKVT NLHAWEMKTP TMNKLLEQ
Best Arabidopsis Sequence Match ( AT3G52600.1 )
(BLAST)
001: MSAPKFGYVL LLIVLINISN NGVDAFHKVF KKLQSKSTSL ESVSPLHRTA YHFQPPRHWI NDPNAPMLYK GVYHLFYQYN PKGAVWGNIV WAHSVSKDLI
101: NWEALEPAIY PSKWFDINGT WSGSATHVPG KGPVILYTGI TENQTQIQNY AIPQDLSDPY LKTWIKPDDN PIVKPDNGEN GSAFRDPTTA WFNKKDGYWR
201: MLVGSKRKNR GIAYMYKSRD FKKWVKSKRP IHSRKKTGMW ECPDFFPVSV TDKKNGLDFS YDGPNAKHVL KVSLDLTRYE YYTLGTYDTK KDRYRPDGYT
301: PDGWDGLRFD YGNYYASKTF FDDKTNRRIL WGWANESDTV QDDTVKGWAG IQLIPRTILL DSSGKQLVFW PIEEIESLRG KNVQMTNQKM EMGQRFEVQG
401: ITPAQVDVDV TFNVGNLEKA EKFDESFATK PLELCNLKGS NVNGGVGPFG LITLATSDLE EYTPVFFRVF KDAASNKPKV LMCSDAKPSS LKKDTGTDAK
501: ERMYKPSFAG FVDVGLLDGK ISLRSLIDHS VVESFGAKGK TVITSRVYPT KAVGEKAHLF VFNNGSQPVT VESLNAWNMQ KPLKMNQGAK
Arabidopsis Description
CWINV2Beta-fructofuranosidase, insoluble isoenzyme CWINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEF8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.