Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 4
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
TargetP:secretory
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G524600.1 Wheat vacuole 96.6 98.61
TraesCS3B01G584500.1 Wheat vacuole 94.74 96.37
TraesCS3A01G516900.1 Wheat unclear 94.23 95.85
Os01t0966700-01 Rice extracellular, vacuole 83.53 83.39
HORVU6Hr1G080230.1 Barley cytosol 16.3 82.05
HORVU2Hr1G071180.1 Barley cytosol 25.64 79.47
OQU88249 Sorghum plastid, vacuole 81.15 75.75
Zm00001d041991_P001 Maize extracellular 75.89 72.1
HORVU5Hr1G124030.19 Barley cytosol 69.61 71.3
HORVU1Hr1G048510.4 Barley cytosol 26.83 71.17
HORVU5Hr1G123970.5 Barley plastid 70.46 70.7
HORVU6Hr1G011260.19 Barley vacuole 72.5 70.58
HORVU6Hr1G012550.8 Barley golgi 72.67 67.51
GSMUA_Achr6P13170_001 Banana vacuole 56.71 56.9
HORVU0Hr1G014400.1 Barley vacuole 45.5 53.6
HORVU2Hr1G109210.1 Barley cytosol, extracellular 12.05 49.65
HORVU2Hr1G109080.7 Barley cytosol, peroxisome, vacuole 45.67 49.45
HORVU4Hr1G011000.1 Barley vacuole 48.9 49.4
HORVU2Hr1G118820.1 Barley cytosol 44.14 48.96
HORVU5Hr1G123930.2 Barley vacuole 47.71 48.28
HORVU1Hr1G086890.7 Barley vacuole 47.2 48.26
HORVU2Hr1G109120.7 Barley vacuole 48.56 48.23
HORVU4Hr1G086300.2 Barley plastid, vacuole 49.24 47.54
VIT_06s0004g08000.t01 Wine grape vacuole 15.28 47.12
HORVU2Hr1G118790.15 Barley vacuole 47.2 46.96
HORVU3Hr1G005350.4 Barley golgi, vacuole 46.69 46.77
Solyc08g045720.1.1 Tomato extracellular 10.87 43.54
HORVU3Hr1G097050.5 Barley mitochondrion, vacuole 11.21 42.86
HORVU2Hr1G109200.2 Barley vacuole 15.11 42.18
HORVU2Hr1G091990.6 Barley cytosol 17.32 41.63
HORVU2Hr1G073210.3 Barley vacuole 18.68 39.01
HORVU7Hr1G020410.2 Barley cytosol 8.15 35.82
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 38.71 34.55
HORVU7Hr1G000270.1 Barley mitochondrion 37.01 34.12
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 38.03 33.94
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 38.03 32.99
HORVU0Hr1G018850.4 Barley vacuole 34.13 32.74
HORVU7Hr1G000250.3 Barley vacuole 35.65 31.96
HORVU7Hr1G001040.6 Barley plastid 34.97 30.88
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 13.41 30.5
HORVU7Hr1G000260.1 Barley plastid 35.48 28.87
HORVU3Hr1G005360.1 Barley mitochondrion, plastid 13.58 27.59
HORVU2Hr1G109240.2 Barley vacuole 19.86 27.15
HORVU2Hr1G091910.5 Barley cytosol 9.0 9.53
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.1UniProt:A0A287MR29
InterPro:ConA-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfEnsemblPlantsGene:HORVU3Hr1G113100EnsemblPlants:HORVU3Hr1G113100.14InterPro:IPR023296PFAM:PF00251
PFAM:PF08244ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF9SMART:SM00640SUPFAM:SSF49899
SUPFAM:SSF75005SignalP:SignalP-noTMUniParc:UPI000B4612FFSEG:seg::
Description
No Description!
Coordinates
chrchr3H:+:687581472..687584648
Molecular Weight (calculated)
65885.2 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.219
Length
589 amino acids
Sequence
(BLAST)
001: VPFLCFLLLS PMAQSSWALF LLLALFSSSL LVCSSNGERV FLYPQSQKVS SIVSQRYRTA YHFQPPKNWI NDPNGPMYYN GIYHEFYQYN PNGSVWGNIV
101: WGHSVSTDLI NWIPLETAIE RDTPSDINGC WTGSATILPG NRLVIIYTGA DPEKRQVQNI VVPKNLSDPY LREWTKAVNN PVIQPVGPGL NSGQFRDPTT
201: GWIGPDGLWR IAVGAELNGD SAALLYKSKD FLNWTRVDHP LYSSNSSSMW ECPDFFAVLP GNSGGLDLST AIPNGAKHVL KMSLDSCDKY MIGVYDLKSD
301: TFIPDTVLDD RRLWSRIDYG NFYASKSFFD SKKGRRIIWG WTNETDSSSD DVAKGWAGIH AIPRTIWLDI HGKQLLQWPV EEVESLRGNE INHQGLELKK
401: GGLFEIKGAD SFQADVEIDF ELTSIDKADP FDPSWLLDVE KHCREAGASV NGGIGPFGLV VLASDNMEEH TAVHFRVYKS EQKYMILMCS DLRSSSLRAG
501: LYTPAYGGFF EYDLEKEKKI SLRTLIDRSA VESFGGGGRV CIMARVYPVA VVDGVAHMYA FNNGSTTVRV PQLRAWSMRR AQVNVKGMV
Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)
001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF
Arabidopsis Description
CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.