Factsheet for TraesCS3A01G516900.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G584500.1	Wheat	vacuole	97.06	97.06
TraesCS3D01G524600.1	Wheat	vacuole	96.72	97.05
HORVU3Hr1G113100.14	Barley	vacuole	95.85	94.23
Os01t0966700-01	Rice	extracellular, vacuole	84.97	83.39
TraesCS4A01G321400.1	Wheat	cytosol, peroxisome, vacuole	64.94	78.66
OQU88249	Sorghum	plastid, vacuole	80.83	74.17
TraesCS6A01G069000.1	Wheat	vacuole	74.61	72.97
Zm00001d041991_P001	Maize	extracellular	76.34	71.29
TraesCS4A01G321500.1	Wheat	vacuole	73.58	71.12
TraesCS6A01G060800.1	Wheat	vacuole	73.58	70.88
TraesCS6A01G060700.1	Wheat	unclear, vacuole	72.88	70.69
TraesCS4A01G321600.1	Wheat	vacuole	73.06	64.38
GSMUA_Achr6P13170_001	Banana	vacuole	57.86	57.07
TraesCS5A01G526200.1	Wheat	plastid	49.91	49.74
TraesCS4A01G248700.1	Wheat	vacuole	49.74	49.57
TraesCS2A01G488500.2	Wheat	peroxisome	46.46	49.27
TraesCS2A01G588200.1	Wheat	vacuole	44.91	49.24
TraesCS2A01G489100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.8	49.01
TraesCS2A01G488900.1	Wheat	vacuole	48.88	47.72
TraesCS1A01G394000.1	Wheat	vacuole	46.98	47.72
TraesCS2A01G588300.1	Wheat	vacuole	48.53	47.55
TraesCS4A01G321700.1	Wheat	vacuole	47.5	47.17
VIT_06s0004g08000.t01	Wine grape	vacuole	15.54	47.12
TraesCS3A01G029700.1	Wheat	cytosol	26.94	46.99
TraesCS2A01G489000.1	Wheat	endoplasmic reticulum, vacuole	47.84	46.79
TraesCS2A01G588700.1	Wheat	vacuole	46.98	46.1
TraesCS2A01G590900.1	Wheat	vacuole	47.67	44.59
TraesCS2A01G588900.1	Wheat	cytosol	39.9	44.08
TraesCS1A01G214700.1	Wheat	peroxisome, plastid, vacuole	36.27	43.93
Solyc08g045720.1.1	Tomato	extracellular	11.05	43.54
TraesCS2A01G295400.1	Wheat	unclear	49.4	43.27
TraesCS4A01G485500.1	Wheat	mitochondrion	32.64	37.13
TraesCS2A01G386100.2	Wheat	plastid, vacuole	39.9	35.21
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.86	34.25
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.51	33.89
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	35.41	33.66
TraesCS4A01G485800.1	Wheat	vacuole	37.48	33.49
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	35.41	33.44
TraesCS4A01G485400.2	Wheat	golgi	35.58	33.44
TraesCS7A01G009400.1	Wheat	vacuole	37.48	33.44
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	38.69	33.43
TraesCS7A01G009800.2	Wheat	golgi, unclear	35.58	33.23
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	36.96	32.92
TraesCS7A01G009600.3	Wheat	mitochondrion	36.96	32.82
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	36.44	32.81
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	38.0	32.69
TraesCS6A01G023100.1	Wheat	vacuole	38.0	32.64
TraesCS7A01G009200.2	Wheat	vacuole	35.41	31.64
TraesCS7A01G009500.3	Wheat	plastid	35.23	31.53
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	35.23	31.48
TraesCS4A01G486000.1	Wheat	golgi	35.75	31.17
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	35.58	31.16
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	35.75	31.03
TraesCS7A01G060300.2	Wheat	mitochondrion	35.92	29.63

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF9
SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G516900	EnsemblPlants:TraesCS3A01G516900.1
TIGR:cd08996	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:734128065..734131142

Molecular Weight (calculated)

64795.7 Da

IEP (calculated)

6.106

GRAVY (calculated)

-0.263

Length

579 amino acids

Sequence
(BLAST)

001: MAQSWAFFLL VVLCFCCVSD LICGSNGERV FLYPQSQKVS SIVSQRYRTA YHFQPPKNWI NDPNGPMYYN GIYHEFYQYN PNGSVWGNIV WGHSVSTDLI
101: NWIPLETAIA RDTPSDINGC WTGSATILPG NRLVIIYTGA DPEKRQVQNI VVPKNMSDPY LREWTKAGNN PVIQPVGPGL NSGQFRDPTT GWVGPDGLWR
201: IAVGAELNGD SAALLYKSKD FLNWTRVDHP LYSSNSSSMW ECPDFFAVLP GNSGGLDLSA AIPNGAKHVL KMSLDSCDKY MIGVYDLKSD SFIPDTVLDD
301: RRLWLRIDYG NFYASKSFFD SKKGRRIIWG WTNETDSSSD DVAKGWAGIH AIPRTIWLDS HGKQLLQWPV EEVESLRGNE INHQGLELKK GGLFEIKGTD
401: SFQADVEIDF ELTSIDKADP FDPSWLLDVE KHCREAGASV NAGIGPFGLV VLASDNMEEH TAVHFRVYKS EQKYMILMCS DLRSSSLRPG LYTPAYGGFF
501: EYDLEKEKKI SLRTLIDRSA VESFGGSGRV CIMARVYPVA VVDGVAHMYA FNNGSATVRV PQLRAWSMRR AQVNVKGME

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.