Factsheet for TraesCS6A01G060700.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G064400.1	Wheat	vacuole	98.33	98.49
TraesCS6B01G080700.3	Wheat	vacuole	97.15	96.51
HORVU2Hr1G071180.1	Barley	cytosol	29.31	92.11
HORVU1Hr1G048510.4	Barley	cytosol	30.82	82.88
TraesCS6A01G060800.1	Wheat	vacuole	75.04	74.54
TraesCS4A01G321400.1	Wheat	cytosol, peroxisome, vacuole	59.13	73.85
TraesCS3A01G516900.1	Wheat	unclear	70.69	72.88
Os01t0966700-01	Rice	extracellular, vacuole	70.35	71.19
TraesCS4A01G321500.1	Wheat	vacuole	66.83	66.61
OQU88249	Sorghum	plastid, vacuole	69.85	66.09
TraesCS6A01G069000.1	Wheat	vacuole	65.33	65.88
Zm00001d041991_P001	Maize	extracellular	66.5	64.03
TraesCS4A01G321600.1	Wheat	vacuole	65.83	59.82
GSMUA_Achr6P13170_001	Banana	vacuole	52.26	53.15
TraesCS2A01G588200.1	Wheat	vacuole	42.55	48.11
TraesCS5A01G526200.1	Wheat	plastid	46.57	47.85
TraesCS2A01G488900.1	Wheat	vacuole	46.9	47.22
TraesCS2A01G488500.2	Wheat	peroxisome	43.05	47.07
TraesCS2A01G489100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	43.55	47.02
TraesCS4A01G248700.1	Wheat	vacuole	45.39	46.64
TraesCS2A01G588300.1	Wheat	vacuole	45.56	46.02
TraesCS2A01G489000.1	Wheat	endoplasmic reticulum, vacuole	45.39	45.78
TraesCS2A01G588700.1	Wheat	vacuole	44.72	45.25
TraesCS1A01G394000.1	Wheat	vacuole	42.88	44.91
TraesCS4A01G321700.1	Wheat	vacuole	42.21	43.22
TraesCS1A01G214700.1	Wheat	peroxisome, plastid, vacuole	34.51	43.1
TraesCS3A01G029700.1	Wheat	cytosol	23.95	43.07
TraesCS2A01G588900.1	Wheat	cytosol	37.69	42.94
VIT_06s0004g08000.t01	Wine grape	vacuole	13.74	42.93
TraesCS2A01G590900.1	Wheat	vacuole	44.39	42.81
TraesCS2A01G295400.1	Wheat	unclear	44.39	40.09
Solyc08g045720.1.1	Tomato	extracellular	9.72	39.46
TraesCS4A01G485500.1	Wheat	mitochondrion	32.66	38.31
TraesCS2A01G386100.2	Wheat	plastid, vacuole	38.69	35.21
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	34.84	33.93
TraesCS7A01G009400.1	Wheat	vacuole	36.68	33.74
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	34.34	33.66
TraesCS4A01G485400.2	Wheat	golgi	34.67	33.6
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	36.85	33.49
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	36.85	33.43
TraesCS7A01G009800.2	Wheat	golgi, unclear	34.67	33.39
TraesCS4A01G485800.1	Wheat	vacuole	36.01	33.18
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	35.51	32.97
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	36.85	32.69
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	36.68	32.69
TraesCS7A01G009600.3	Wheat	mitochondrion	35.68	32.67
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	35.51	32.62
TraesCS6A01G023100.1	Wheat	vacuole	36.18	32.05
TraesCS7A01G009500.3	Wheat	plastid	34.67	31.99
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	34.67	31.94
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	35.18	31.77
TraesCS7A01G009200.2	Wheat	vacuole	34.34	31.64
TraesCS4A01G486000.1	Wheat	golgi	35.18	31.63
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	34.67	31.03
TraesCS7A01G060300.2	Wheat	mitochondrion	35.68	30.34

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244
PANTHER:PTHR31953	PANTHER:PTHR31953:SF9	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6A01G060700	EnsemblPlants:TraesCS6A01G060700.1	TIGR:cd08996	:	:	:

Description

No Description!

Coordinates

chr6A:+:32658028..32662149

Molecular Weight (calculated)

66648.5 Da

IEP (calculated)

4.757

GRAVY (calculated)

-0.294

Length

597 amino acids

Sequence
(BLAST)

001: MAQAWAFLLP VLVFGSYVTS LFFPSYISGP LCGGDGGGRS LFLCAQAPKD QDPSPAVSTM YKTAFHFQPA KNWMNDPSGP MYFNGFYHEF YQYNLNGPIF
101: GDIVWGHSVS TDLVNWIGLE PALVRDTPSD IDGCWTGSVT ILPGGKPVII YTGGDKDQHQ AQNIAFPKNR SDPYLREWIK AANNPVLRPD EPGMNSIEFR
201: DPTTGWIGPD GLWRMAVGGE LNGYSAALLY KSEDFLNWTK VDHPLYSHNG SNMWECPDFF AVLPGNNAGL DLSAAIPQGA KHALKMSVDS VDKYMIGVYD
301: LQRDAFVPDN VVDDRRLWLR IDYGTFYASK SFFDSNKNRR IIWGWSRETD SPSDDLEKGW AGLHTIPRTI WLADNGKQLL QWPVEEIESL RTNEISHQGI
401: ELNKGDLFEI KEVDAFQADV EIGFELASID DADPFDPSWL LDPEKHCGEA GASVPGGIGP FGLVILASDN MDEHTEVYFR VYKSQEKYMV LMCSDLRRSS
501: LRPDLEKPAY GGFFEFDLEK ERKISLRTLI DRSAVESFGG GGRVCITSRV YPAVLADVGR AHIYAFNNGS ATVRVPQLSA WTMRKAQVNV EKGWSAI

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.