Factsheet for TraesCS4A01G485400.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

vacuole 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

extracellular: 19786127
golgi: 23128297
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G009800.2	Wheat	golgi, unclear	96.92	96.29
HORVU7Hr1G001040.6	Barley	plastid	95.13	87.86
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	75.32	75.69
TraesCS4A01G485500.1	Wheat	mitochondrion	55.03	66.6
TraesCS4A01G485800.1	Wheat	vacuole	66.4	63.12
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	67.05	62.77
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	66.72	62.56
TraesCS7A01G009400.1	Wheat	vacuole	65.75	62.4
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	60.55	61.25
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	63.64	59.3
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	62.34	59.08
TraesCS4A01G486000.1	Wheat	golgi	63.64	59.04
TraesCS7A01G009600.3	Wheat	mitochondrion	62.34	58.9
TraesCS7A01G009500.3	Wheat	plastid	61.85	58.89
TraesCS7A01G009200.2	Wheat	vacuole	60.71	57.72
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	60.71	57.72
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	62.01	57.27
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	59.25	56.77
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	61.85	56.53
Zm00001d014947_P001	Maize	plasma membrane	61.53	56.31
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	61.36	56.17
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	60.88	55.97
Os02t0106100-01	Rice	plasma membrane	60.06	55.89
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	50.16	55.78
TraesCS6A01G023100.1	Wheat	vacuole	60.23	55.04
Zm00001d054075_P001	Maize	plastid, vacuole	48.05	54.01
TraesCS7A01G060300.2	Wheat	mitochondrion	61.36	53.85
VIT_02s0154g00090.t01	Wine grape	vacuole	45.45	53.44
VIT_16s0022g00670.t01	Wine grape	cytosol	46.1	52.89
KRH57351	Soybean	endoplasmic reticulum	51.14	48.84
KRH04082	Soybean	endoplasmic reticulum	50.49	48.22
TraesCS2A01G386100.2	Wheat	plastid, vacuole	50.32	47.26
KRH28036	Soybean	vacuole	46.92	46.69
PGSC0003DMT400035987	Potato	cytosol, extracellular	47.89	46.17
KRH77397	Soybean	endoplasmic reticulum	50.49	46.07
Solyc08g079080.2.1	Tomato	unclear	48.54	45.86
Solyc03g083910.2.1	Tomato	extracellular	48.05	45.68
CDY39804	Canola	vacuole	46.75	45.64
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	48.38	45.64
CDY03265	Canola	vacuole	46.27	45.17
AT1G62660.1	Thale cress	vacuole	46.59	44.29
Bra036653.1-P	Field mustard	vacuole	46.75	43.97
CDY31826	Canola	vacuole	46.59	43.88
CDY46906	Canola	vacuole	46.59	43.88
AT1G12240.1	Thale cress	vacuole	47.24	43.83
Bra027030.1-P	Field mustard	vacuole	46.43	43.73
CDY30056	Canola	vacuole	46.75	43.7
KRH23803	Soybean	vacuole	43.51	43.65
CDY03264	Canola	cytosol, golgi, vacuole	42.86	43.56
KRH39981	Soybean	vacuole	44.32	43.33
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	42.05	43.31
CDY39805	Canola	cytosol, golgi, plastid, vacuole	42.37	43.07
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	46.27	43.05
CDX98080	Canola	cytosol, peroxisome, vacuole	45.94	42.75
CDY26548	Canola	vacuole	45.94	42.68
KRH56348	Soybean	vacuole	44.64	42.57
CDY15984	Canola	vacuole	45.78	41.47
Bra026984.1-P	Field mustard	vacuole	45.94	41.01
TraesCS2A01G488900.1	Wheat	vacuole	36.2	37.61
TraesCS4A01G248700.1	Wheat	vacuole	35.39	37.52
TraesCS5A01G526200.1	Wheat	plastid	35.23	37.35
TraesCS4A01G321400.1	Wheat	cytosol, peroxisome, vacuole	28.57	36.82
TraesCS2A01G488500.2	Wheat	peroxisome	32.47	36.63
TraesCS2A01G588200.1	Wheat	vacuole	31.33	36.55
TraesCS4A01G321700.1	Wheat	vacuole	34.42	36.36
TraesCS1A01G394000.1	Wheat	vacuole	33.6	36.32
TraesCS2A01G489000.1	Wheat	endoplasmic reticulum, vacuole	34.58	35.98
TraesCS2A01G588700.1	Wheat	vacuole	34.42	35.93
TraesCS2A01G489100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	32.14	35.8
TraesCS1A01G214700.1	Wheat	peroxisome, plastid, vacuole	27.76	35.77
TraesCS3A01G516900.1	Wheat	unclear	33.44	35.58
TraesCS2A01G588300.1	Wheat	vacuole	33.93	35.36
TraesCS6A01G060700.1	Wheat	unclear, vacuole	33.6	34.67
TraesCS3A01G029700.1	Wheat	cytosol	18.67	34.64
TraesCS2A01G590900.1	Wheat	vacuole	34.58	34.41
TraesCS2A01G588900.1	Wheat	cytosol	29.22	34.35
TraesCS6A01G069000.1	Wheat	vacuole	32.63	33.95
TraesCS6A01G060800.1	Wheat	vacuole	32.95	33.78
TraesCS4A01G321500.1	Wheat	vacuole	32.63	33.56
TraesCS2A01G295400.1	Wheat	unclear	35.23	32.83
TraesCS4A01G321600.1	Wheat	vacuole	32.14	30.14

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244
PANTHER:PTHR31953	PANTHER:PTHR31953:SF10	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4A01G485400	EnsemblPlants:TraesCS4A01G485400.2	TIGR:cd08996	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:739064972..739068098

Molecular Weight (calculated)

68466.7 Da

IEP (calculated)

5.164

GRAVY (calculated)

-0.299

Length

616 amino acids

Sequence
(BLAST)

001: MGSHGKPPLP YAYKPLPSDA DGERAGCTRW RVCAVALTAS AMVVVVVGAT LLAGFRVDQA VDEEAAGGFP WSNEMLQWQR SGYHFQTAKN YMSDPNGLMY
101: YRGWYHMFFQ YNPVGTDWDD GMEWGHAVSR NLVQWRTLPI AMVADQWYDI LGVLSGSMTV LPNGTVIMIY TGATNASAVE VQCIATPADP TDPLLRRWTK
201: HPANPVIWSP PGVGTKDFRD PMTAWYDESD DTWRTLLGSK DDNNGHHDGI AMMYKTKDFL NYELIPGILH RVERTGEWEC IDFYPVGRRT SDNSSEMLHV
301: LKASMDDERH DYYSLGTYDS AANRWTPIDP ELDLGIGLRY DWGKFYASTS FYDPAKKRRV LMGYVGEVDS KRADVVKGWA SIQSVPRTIA LDEKTRTNLL
401: LWPVEEIETL RLNATELSDV TLNTGSVIHI PLRQGTQLDI EATFHLDASA VAALNEADVG YNCSSSGGAV NRGALGPFGL LVLAAGDRRG EQTAVYFYVS
501: RGLDGGLHTS FCQDELRSSR AKDVTKRVIG STVPVLDGEA FSMRVLVDHS IVQGFAMGGR TTMTSRVYPM EAYQEAKVYL FNNATGASVT AERLVVHEMD
601: SAHNQLSNMD DHSYVQ

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.