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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 2
  • vacuole 5
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:vacuole
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:nucleus
YLoc:vacuole
 extracellular: 22364583
extracellular: 22892874
extracellular: 29876421
msms PMID: 22892874 doi
EH Konozy, H Rogniaux, M Causse, M Faurobert
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400035987 Potato cytosol, extracellular 94.44 95.77
VIT_16s0022g00670.t01 Wine grape cytosol 56.48 68.16
GSMUA_Achr11P... Banana mitochondrion, vacuole 52.93 64.6
GSMUA_Achr5P19880_001 Banana mitochondrion, vacuole 54.32 62.63
HORVU2Hr1G091990.6 Barley cytosol 23.61 62.45
GSMUA_Achr1P11470_001 Banana peroxisome, plastid, vacuole 51.54 60.29
KRH39981 Soybean vacuole 58.49 60.16
KRH23803 Soybean vacuole 56.17 59.28
KRH56348 Soybean vacuole 58.64 58.82
TraesCS2B01G403000.1 Wheat vacuole 57.87 56.9
TraesCS2D01G382600.2 Wheat vacuole 58.02 56.71
TraesCS2A01G386100.2 Wheat plastid, vacuole 57.41 56.71
Solyc08g079080.2.1 Tomato unclear 56.94 56.6
Os04t0535600-01 Rice extracellular, mitochondrion, plasma membrane 57.25 56.55
Zm00001d002830_P001 Maize extracellular 57.87 56.22
Zm00001d025943_P001 Maize vacuole 57.72 55.9
TraesCS4A01G485500.1 Wheat mitochondrion 41.67 53.05
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 54.78 52.67
TraesCS7D01G009300.1 Wheat mitochondrion 41.2 52.46
Zm00001d014947_P001 Maize plasma membrane 54.48 52.45
Zm00001d054075_P001 Maize plastid, vacuole 43.67 51.64
TraesCS4A01G484800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 52.31 51.52
TraesCS7D01G010000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 52.31 51.52
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 52.47 51.52
Os02t0106100-01 Rice plasma membrane 52.62 51.51
TraesCS7A01G010200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 52.16 51.45
TraesCS6D01G026400.1 Wheat peroxisome, plastid, vacuole 52.78 50.89
TraesCS6A01G023200.1 Wheat peroxisome, plastid, vacuole 52.47 50.75
TraesCS6B01G031600.1 Wheat peroxisome, plastid, vacuole 52.01 50.52
TraesCS6D01G026300.2 Wheat peroxisome, plastid, vacuole 52.62 50.44
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 51.23 50.3
TraesCS6A01G023100.1 Wheat vacuole 52.31 50.3
OQU82023 Sorghum plastid 54.63 50.28
TraesCS6D01G026600.2 Wheat endoplasmic reticulum, peroxisome, vacuole 52.01 50.22
TraesCS6A01G023300.2 Wheat peroxisome, plastid, vacuole 52.01 50.07
TraesCS6B01G031700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 52.01 50.07
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 52.47 50.07
TraesCS6D01G026500.2 Wheat peroxisome, plastid, vacuole 52.16 49.85
TraesCS6B01G031500.1 Wheat extracellular, peroxisome, vacuole 51.85 49.7
TraesCS6B01G031300.1 Wheat peroxisome, plastid, vacuole 51.54 49.63
TraesCS7A01G009700.1 Wheat mitochondrion, plastid 45.68 48.6
TraesCS4A01G485800.1 Wheat vacuole 48.46 48.46
TraesCS7A01G009400.1 Wheat vacuole 48.3 48.23
TraesCS7D01G008700.1 Wheat vacuole 49.23 48.19
TraesCS7A01G009100.1 Wheat endoplasmic reticulum, peroxisome, vacuole 49.07 48.11
TraesCS4A01G485400.2 Wheat golgi 45.68 48.05
TraesCS4A01G486000.1 Wheat golgi 49.07 47.89
HORVU7Hr1G000270.1 Barley mitochondrion 47.22 47.89
TraesCS7D01G008900.1 Wheat vacuole 47.84 47.84
HORVU0Hr1G018850.4 Barley vacuole 45.22 47.72
TraesCS4A01G485000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 45.06 47.63
TraesCS7A01G009800.2 Wheat golgi, unclear 45.37 47.42
TraesCS4A01G485600.1 Wheat mitochondrion, vacuole 47.53 47.38
TraesCS7A01G009600.3 Wheat mitochondrion 47.38 47.09
TraesCS7D01G009400.2 Wheat cytosol, plastid, vacuole 45.06 47.02
TraesCS7A01G060400.1 Wheat cytosol, peroxisome, plastid, vacuole 46.6 46.97
HORVU7Hr1G000250.3 Barley vacuole 47.38 46.73
TraesCS7D01G055000.1 Wheat plastid 46.3 46.66
TraesCS4A01G485900.1 Wheat cytosol, peroxisome, vacuole 46.45 46.45
TraesCS7A01G009200.2 Wheat vacuole 46.3 46.3
TraesCS7D01G008800.2 Wheat cytosol, plastid, vacuole 45.83 46.12
TraesCS7A01G009500.3 Wheat plastid 45.22 45.29
TraesCS7D01G009700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 44.6 44.95
HORVU7Hr1G001040.6 Barley plastid 45.83 44.53
Solyc08g045720.1.1 Tomato extracellular 10.03 44.22
TraesCS4A01G485700.1 Wheat cytosol, mitochondrion, peroxisome, plastid, vacuole 45.37 44.08
HORVU7Hr1G000260.1 Barley plastid 49.07 43.92
TraesCS7D01G054800.3 Wheat mitochondrion, vacuole 47.22 43.65
TraesCS7D01G009100.1 Wheat cytosol, mitochondrion, peroxisome, vacuole 44.75 43.35
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 17.28 43.24
TraesCS7A01G060300.2 Wheat mitochondrion 46.76 43.16
Solyc10g083290.1.1 Tomato extracellular 38.58 42.96
Solyc10g085360.1.1 Tomato nucleus 37.81 42.61
Solyc06g064620.2.1 Tomato mitochondrion 36.42 42.14
Solyc10g083300.1.1 Tomato nucleus 37.65 41.43
Solyc09g010090.2.1 Tomato vacuole 37.19 41.34
Solyc03g121680.1.1 Tomato vacuole 36.42 41.33
TraesCS7D01G009200.2 Wheat cytosol, mitochondrion, plasma membrane, plastid, vacuole 47.38 40.61
Solyc10g085650.1.1 Tomato unclear 35.96 40.52
Solyc09g010080.2.1 Tomato vacuole 36.42 40.41
Solyc10g085640.1.1 Tomato unclear 33.49 38.96
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2InterPro:Beta-fructofuranosidase
InterPro:ConA-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004564GO:GO:0004575
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005775
GO:GO:0005975GO:GO:0005985GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296UniProt:K4BIG6PFAM:PF00251PFAM:PF08244
PFAM:PF11837ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF6SMART:SM00640SUPFAM:SSF49899
SUPFAM:SSF75005EnsemblPlantsGene:Solyc03g083910.2EnsemblPlants:Solyc03g083910.2.1TMHMM:TMhelixUniParc:UPI0002768ED4SEG:seg
Description
No Description!
Coordinates
chr3:-:53851092..53855368
Molecular Weight (calculated)
71365.2 Da
IEP (calculated)
5.726
GRAVY (calculated)
-0.219
Length
648 amino acids
Sequence
(BLAST)
001: MATQCYDPEN SASRYTLLPD QPDSGHRKSL KIISGIFLSV FLLLSVAFFP ILNNQSPDLQ IDSRSPAPPS RGVSQGVSDK TFRDVAGASH VSYAWSNAML
101: SWQRTAYHFQ PQKNWMNDPN GPLYHKGWYH LFYQYNPDSA IWGNITWGHA VSKDLIHWLY LPFAMVPDQW YDINGVWTGS ATILPDGQIM MLYTGDTDDY
201: VQVQNLAYPA NLSDPLLLDW VKFKGNPVLV PPPGIGVKDF RDPTTAWTGP QNGQWLLTIG SKIGKTGVAL VYETSNFTSF KLLDGVLHAV PGTGMWECVD
301: FYPVSTKKTN GLDTSYNGPG VKHVLKASLD DNKQDHYAIG TYDLGKNKWT PDNPELDCGI GLRLDYGKYY ASKTFYDPKK ERRVLWGWIG ETDSESADLQ
401: KGWASVQSIP RTVLYDKKTG THLLQWPVEE IESLRVGDPT VKQVDLQPGS IELLRVDSAA ELDIEASFEV DKVALQGIIE ADHVGFSCST SGGAASRGIL
501: GPFGVIVIAD QTLSELTPVY FYISKGADGR AETHFCADQT RFAFLSGTIN LSLSSEAPGV GKQVYGSSVP VLDGEKHSMR LLVDHSIVES FAQGGRTVIT
601: SRIYPTKAVN GAARLFVFNN ATGASVTASV KIWSLESANI QSFPLQDL
Best Arabidopsis Sequence Match ( AT1G62660.1 )
(BLAST)
001: MASTEALLPV TSLQDPLSES RSDQIPETRR RRPIKVHLAV YSGLLLIALY VTLIVTHDGS KAEIATESRP RMAGVSEKSN DGVWISSDDG KVEAFPWNNT
101: ILSWQRTAFH FQPEKNWMND PNGPLFYKGW YHFFYQYNPN AAVWGDIVWG HAVSKDLIHW LYLPIAMVPD QWYDANGVWT GSATFLDDGS IVMLYTGSTD
201: EFVQVQNLAY PEDPSDPLLL KWVKFSGNPV LVPPPGIGAK DFRDPTTAWK TSSGKWRITI GSKINRTGIS LIYDTTDFKT YEKHETLLHQ VPNTGMWECV
301: DFYPVSKTQL NGLDTSVNGP DVKHVIKASM DDTRIDHYAI GTYDDSNATW VPDNPSIDVG ISTGLRYDYG KYYASKTFYD QNKGRRILWG WIGESDSEAA
401: DVQKGWSSVQ GIPRTVVLDT RTHKNLVQWP VEEIKSLRLS SKKFDMTIGP GTVVPVDVGS ATQLDIEAEF EIKTDDLKLF FDDDSVEADN KFSCETNGGS
501: TARGALGPFG FSVLADEGLS EQTPVYFYVT KGKHSKLNTV FCTDTSRSTL ANDVVKPIYG SFVPVLKGEK LTMRILVDHS IVEGFAQGGR SCITSRVYPT
601: KAIYGATKLF LFNNAIDATV TASFTVWQMN NAFIHPYSSD DLGVPSST
Arabidopsis Description
BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.