Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 7
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400093309 | Potato | cytosol | 12.87 | 90.24 |
| Solyc10g085640.1.1 | Tomato | unclear | 79.3 | 81.87 |
| Solyc10g085360.1.1 | Tomato | nucleus | 76.52 | 76.52 |
| Solyc10g083290.1.1 | Tomato | extracellular | 72.17 | 71.31 |
| Solyc10g083300.1.1 | Tomato | nucleus | 71.83 | 70.12 |
| Solyc09g010080.2.1 | Tomato | vacuole | 70.96 | 69.86 |
| Solyc09g010090.2.1 | Tomato | vacuole | 69.22 | 68.27 |
| PGSC0003DMT400097344 | Potato | cytosol | 17.04 | 63.23 |
| VIT_08s0007g03060.t01 | Wine grape | vacuole | 62.09 | 62.74 |
| KRG89524 | Soybean | cytosol | 44.87 | 61.43 |
| KRH32774 | Soybean | endoplasmic reticulum, vacuole | 61.22 | 61.11 |
| KRH67945 | Soybean | vacuole | 56.35 | 60.67 |
| KRG96203 | Soybean | vacuole | 57.91 | 60.11 |
| KRG89527 | Soybean | vacuole | 57.39 | 59.46 |
| AT3G52600.1 | Thale cress | vacuole | 60.17 | 58.64 |
| KRG89530 | Soybean | vacuole | 47.13 | 58.53 |
| Bra033419.1-P | Field mustard | vacuole | 59.83 | 58.11 |
| CDY23227 | Canola | vacuole | 59.83 | 58.11 |
| Bra017257.1-P | Field mustard | cytosol | 42.09 | 57.89 |
| CDX95352 | Canola | vacuole | 45.57 | 57.33 |
| KRG89522 | Soybean | cytosol, nucleus, vacuole | 31.13 | 57.19 |
| CDY43744 | Canola | vacuole | 58.43 | 56.76 |
| Zm00001d003776_P001 | Maize | extracellular | 51.3 | 56.62 |
| GSMUA_AchrUn_... | Banana | vacuole | 53.57 | 56.51 |
| Bra023053.1-P | Field mustard | vacuole | 57.57 | 56.39 |
| AT2G36190.1 | Thale cress | vacuole | 57.91 | 56.35 |
| CDX79661 | Canola | vacuole | 57.57 | 56.1 |
| CDX84575 | Canola | vacuole | 57.57 | 56.1 |
| GSMUA_Achr6P13160_001 | Banana | vacuole | 56.52 | 55.56 |
| GSMUA_Achr4P29900_001 | Banana | golgi, vacuole | 56.52 | 55.56 |
| KXG30339 | Sorghum | vacuole | 55.83 | 55.25 |
| TraesCSU01G175300.1 | Wheat | vacuole | 50.09 | 54.55 |
| TraesCSU01G173900.1 | Wheat | vacuole | 50.09 | 54.55 |
| TraesCS4D01G350500.1 | Wheat | plastid | 54.78 | 54.22 |
| TraesCS5A01G526200.1 | Wheat | plastid | 54.43 | 53.87 |
| Os04t0413200-01 | Rice | plasma membrane | 54.78 | 53.75 |
| TraesCS3D01G015900.1 | Wheat | cytosol | 50.43 | 53.7 |
| Os02t0534400-01 | Rice | vacuole | 53.74 | 53.55 |
| TraesCS4A01G321700.1 | Wheat | vacuole | 54.26 | 53.52 |
| Zm00001d016708_P002 | Maize | extracellular | 54.61 | 53.49 |
| TraesCS5B01G556600.1 | Wheat | vacuole | 54.26 | 53.42 |
| TraesCS5D01G552900.1 | Wheat | vacuole | 54.26 | 53.42 |
| TraesCS4B01G356800.1 | Wheat | vacuole | 53.74 | 53.18 |
| TraesCS3B01G028500.1 | Wheat | vacuole | 53.74 | 53.0 |
| Os04t0413500-01 | Rice | cytosol | 54.96 | 52.84 |
| TraesCS1D01G402500.1 | Wheat | vacuole | 52.0 | 52.55 |
| EES10748 | Sorghum | vacuole | 53.74 | 52.02 |
| TraesCS1B01G422700.1 | Wheat | vacuole | 51.65 | 51.92 |
| OQU81520 | Sorghum | vacuole | 54.96 | 51.72 |
| TraesCS1A01G394000.1 | Wheat | vacuole | 51.13 | 51.58 |
| Zm00001d025355_P001 | Maize | vacuole | 52.52 | 51.45 |
| Zm00001d025354_P001 | Maize | vacuole | 53.04 | 51.43 |
| TraesCS4D01G065000.1 | Wheat | vacuole | 51.65 | 51.12 |
| EER93500 | Sorghum | vacuole | 51.3 | 50.95 |
| TraesCS4A01G248700.1 | Wheat | vacuole | 51.48 | 50.95 |
| OQU81521 | Sorghum | vacuole | 53.04 | 50.92 |
| TraesCS4B01G066000.1 | Wheat | vacuole | 51.3 | 50.69 |
| TraesCS3A01G029700.1 | Wheat | cytosol | 29.22 | 50.6 |
| TraesCS2D01G293200.1 | Wheat | mitochondrion | 54.43 | 50.48 |
| GSMUA_Achr10P... | Banana | vacuole | 12.7 | 50.34 |
| OQU81519 | Sorghum | vacuole | 52.35 | 50.33 |
| TraesCS2B01G311900.1 | Wheat | nucleus, unclear | 54.43 | 50.24 |
| TraesCSU01G216800.1 | Wheat | mitochondrion | 34.26 | 49.75 |
| TraesCSU01G250400.1 | Wheat | cytosol | 8.7 | 49.02 |
| Solyc06g064620.2.1 | Tomato | mitochondrion | 47.65 | 48.93 |
| TraesCS3B01G054100.1 | Wheat | cytosol | 8.52 | 48.04 |
| TraesCS3B01G028200.1 | Wheat | cytosol | 8.52 | 48.04 |
| TraesCS2A01G295400.1 | Wheat | unclear | 54.26 | 47.2 |
| Solyc03g121680.1.1 | Tomato | vacuole | 46.43 | 46.76 |
| Os03t0735800-00 | Rice | cytosol | 6.96 | 45.45 |
| TraesCS1A01G214700.1 | Wheat | peroxisome, plastid, vacuole | 37.22 | 44.77 |
| TraesCS3B01G028100.1 | Wheat | vacuole | 29.04 | 44.06 |
| Solyc08g045720.1.1 | Tomato | extracellular | 10.26 | 40.14 |
| TraesCS4B01G066200.1 | Wheat | cytosol | 7.13 | 39.42 |
| TraesCS4D01G065200.1 | Wheat | cytosol | 6.78 | 37.5 |
| HORVU3Hr1G097050.5 | Barley | mitochondrion, vacuole | 9.91 | 37.01 |
| Solyc03g083910.2.1 | Tomato | extracellular | 40.52 | 35.96 |
| Solyc08g079080.2.1 | Tomato | unclear | 40.7 | 35.89 |
Protein Annotations
| Gene3D:2.115.10.20 | Gene3D:2.60.120.560 | MapMan:3.1.4.1.1 | InterPro:ConA-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| InterPro:Glyco_hydro_32 | InterPro:Glyco_hydro_32_C | InterPro:Glyco_hydro_32_N | InterPro:Glyco_hydro_beta-prop_sf | InterPro:IPR023296 | UniProt:K4D3Z9 |
| PFAM:PF00251 | PFAM:PF08244 | PANTHER:PTHR31953 | PANTHER:PTHR31953:SF9 | SMART:SM00640 | SUPFAM:SSF49899 |
| SUPFAM:SSF75005 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc10g085650.1 | EnsemblPlants:Solyc10g085650.1.1 | UniParc:UPI000276AA30 | SEG:seg |
Description
No Description!
Coordinates
chr10:+:64763986..64766833
Molecular Weight (calculated)
66302.6 Da
IEP (calculated)
6.994
GRAVY (calculated)
-0.455
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFLRKSSLC AFLFMLFFCS NEANSSHEEF RRLQSSSSKL LKNLFRTEYH FQPPKHWING LMNYNGIYHL FYQYNPKGAV WGNIVWAHSV SIDMINWINL
101: EPAIYPSEVF DKYGTWSGST TILPGNKPVI LYTGIVDDKQ TQVQNYAIPA NLSDPFLRKW IKPDNNPLIV ADESINKTKF RDPTTAWLGQ DGRWRMVVGS
201: LRKNERGLAI MYRSKDFMKW TKAQHPLHSS AKTGNWECVD FFPVSLENTD GLDTSFKGDK IKHVLKVSLD VTRFDYYTIG TYDTKRDRYI PDDTMIDGWH
301: GLRLDYGNFY ASRTFYDPMK NRRVLWGWTN ESDVFPEDSI KKGWSGIQAI PRKLWIDPSG KHLVQWPIEE LEMLRKEKVE LRNYELNKGE NVEVQGITPA
401: QVDVEVTFSF SSLENAEEFD PSWADLYAQD VCAIRGSTVQ GGLGPFGLLT LASENLEEYT PVFFRVFKNQ DKYKVLMCSD ASRSSVRNHE KMYKPSFAGY
501: VETNLTDKRL SLRSLIDHSV VESFGDGGKT CITSRVYPAL AIYGDTHLFA FNNGTEPVKI ETLDAWNMAK SEKWI
101: EPAIYPSEVF DKYGTWSGST TILPGNKPVI LYTGIVDDKQ TQVQNYAIPA NLSDPFLRKW IKPDNNPLIV ADESINKTKF RDPTTAWLGQ DGRWRMVVGS
201: LRKNERGLAI MYRSKDFMKW TKAQHPLHSS AKTGNWECVD FFPVSLENTD GLDTSFKGDK IKHVLKVSLD VTRFDYYTIG TYDTKRDRYI PDDTMIDGWH
301: GLRLDYGNFY ASRTFYDPMK NRRVLWGWTN ESDVFPEDSI KKGWSGIQAI PRKLWIDPSG KHLVQWPIEE LEMLRKEKVE LRNYELNKGE NVEVQGITPA
401: QVDVEVTFSF SSLENAEEFD PSWADLYAQD VCAIRGSTVQ GGLGPFGLLT LASENLEEYT PVFFRVFKNQ DKYKVLMCSD ASRSSVRNHE KMYKPSFAGY
501: VETNLTDKRL SLRSLIDHSV VESFGDGGKT CITSRVYPAL AIYGDTHLFA FNNGTEPVKI ETLDAWNMAK SEKWI
001: MLYKGVYHLF YQYNPKGAVW GNIVWAHSVS KDLINWEALE PAIYPSKWFD INGTWSGSAT HVPGKGPVIL YTGITENQTQ IQNYAIPQDL SDPYLKTWIK
101: PDDNPIVKPD NGENGSAFRD PTTAWFNKKD GYWRMLVGSK RKNRGIAYMY KSRDFKKWVK SKRPIHSRKK TGMWECPDFF PVSVTDKKNG LDFSYDGPNA
201: KHVLKVSLDL TRYEYYTLGT YDTKKDRYRP DGYTPDGWDG LRFDYGNYYA SKTFFDDKTN RRILWGWANE SDTVQDDTVK GWAGIQLIPR TILLDSSGKQ
301: LVFWPIEEIE SLRGKNVQMT NQKMEMGQRF EVQGITPAQV DVDVTFNVGN LEKAEKFDES FATKPLELCN LKGSNVNGGV GPFGLITLAT SDLEEYTPVF
401: FRVFKDAASN KPKVLMCSDA KPSSLKKDTG TDAKERMYKP SFAGFVDVGL LDGKISLRSL IDHSVVESFG AKGKTVITSR VYPTKAVGEK AHLFVFNNGS
501: QPVTVESLNA WNMQKPLKMN QGAK
101: PDDNPIVKPD NGENGSAFRD PTTAWFNKKD GYWRMLVGSK RKNRGIAYMY KSRDFKKWVK SKRPIHSRKK TGMWECPDFF PVSVTDKKNG LDFSYDGPNA
201: KHVLKVSLDL TRYEYYTLGT YDTKKDRYRP DGYTPDGWDG LRFDYGNYYA SKTFFDDKTN RRILWGWANE SDTVQDDTVK GWAGIQLIPR TILLDSSGKQ
301: LVFWPIEEIE SLRGKNVQMT NQKMEMGQRF EVQGITPAQV DVDVTFNVGN LEKAEKFDES FATKPLELCN LKGSNVNGGV GPFGLITLAT SDLEEYTPVF
401: FRVFKDAASN KPKVLMCSDA KPSSLKKDTG TDAKERMYKP SFAGFVDVGL LDGKISLRSL IDHSVVESFG AKGKTVITSR VYPTKAVGEK AHLFVFNNGS
501: QPVTVESLNA WNMQKPLKMN QGAK
Arabidopsis Description
CWINV2Beta-fructofuranosidase, insoluble isoenzyme CWINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEF8]
SUBAcon: [mitochondrion,vacuole]
SUBAcon: [mitochondrion,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.