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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:peroxisome, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003776_P001 Maize extracellular 76.96 88.48
OQU81520 Sorghum vacuole 87.15 85.43
EES10748 Sorghum vacuole 80.13 80.81
Os04t0413500-01 Rice cytosol 77.3 77.42
TraesCS2D01G293200.1 Wheat mitochondrion 75.63 73.06
TraesCS2B01G311900.1 Wheat nucleus, unclear 75.79 72.87
KXG30339 Sorghum vacuole 70.45 72.63
TraesCS2A01G295400.1 Wheat unclear 75.29 68.23
GSMUA_Achr6P13160_001 Banana vacuole 61.1 62.56
EER93500 Sorghum vacuole 58.6 60.62
GSMUA_AchrUn_... Banana vacuole 54.42 59.82
HORVU2Hr1G073210.3 Barley vacuole 27.55 58.51
PGSC0003DMT400023091 Potato cytosol, mitochondrion, plastid, vacuole 50.08 58.48
GSMUA_Achr4P29900_001 Banana golgi, vacuole 57.1 58.46
PGSC0003DMT400093309 Potato cytosol 7.85 57.32
PGSC0003DMT400021619 Potato cytosol 48.91 57.23
OQU81519 Sorghum vacuole 57.1 57.19
PGSC0003DMT400023090 Potato cytosol, extracellular, mitochondrion, vacuole 48.41 56.64
Solyc10g085360.1.1 Tomato nucleus 54.26 56.52
PGSC0003DMT400072606 Potato cytosol 50.25 56.16
PGSC0003DMT400028670 Potato golgi, vacuole 53.76 56.0
AT3G52600.1 Thale cress vacuole 53.92 54.75
Solyc10g083300.1.1 Tomato nucleus 53.76 54.67
Bra033419.1-P Field mustard vacuole 53.92 54.56
CDY23227 Canola vacuole 53.92 54.56
Bra017257.1-P Field mustard cytosol 37.9 54.31
CDX95352 Canola vacuole 41.4 54.27
Solyc09g010090.2.1 Tomato vacuole 52.75 54.2
PGSC0003DMT400072608 Potato extracellular 52.59 54.12
Solyc10g083290.1.1 Tomato extracellular 52.25 53.78
Solyc09g010080.2.1 Tomato vacuole 52.42 53.77
VIT_00s2527g00010.t01 Wine grape cytosol, peroxisome, vacuole 18.2 53.43
CDX79661 Canola vacuole 52.42 53.22
CDX84575 Canola vacuole 52.42 53.22
Solyc10g085650.1.1 Tomato unclear 50.92 53.04
CDY43744 Canola vacuole 52.42 53.04
Bra023053.1-P Field mustard vacuole 51.92 52.98
AT2G36190.1 Thale cress vacuole 52.25 52.96
Solyc10g085640.1.1 Tomato unclear 48.08 51.71
GSMUA_Achr10P... Banana vacuole 12.19 50.34
EES13037 Sorghum vacuole 47.58 48.31
EES13040 Sorghum mitochondrion 44.57 48.02
OQU88249 Sorghum plastid, vacuole 48.75 46.28
KXG27359 Sorghum plastid 47.75 45.76
PGSC0003DMT400097344 Potato cytosol 11.35 43.87
KRH08807 Soybean cytosol, nucleus, vacuole 14.02 39.44
OQU82023 Sorghum plastid 42.57 36.22
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 40.07 35.61
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.1UniProt:A0A109ND96
InterPro:ConA-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296ProteinID:KXG18786.1EnsemblPlants:OQU81521ProteinID:OQU81521
ProteinID:OQU81521.1PFAM:PF00251PFAM:PF08244ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF18
SMART:SM00640EnsemblPlantsGene:SORBI_3006G070830SUPFAM:SSF49899SUPFAM:SSF75005SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI00076BC00FSEG:seg::::
Description
hypothetical protein
Coordinates
chr6:+:43344453..43349422
Molecular Weight (calculated)
66902.5 Da
IEP (calculated)
9.846
GRAVY (calculated)
-0.342
Length
599 amino acids
Sequence
(BLAST)
001: MRSALVVSFA CAWLLLLQLA GASHVVYDEF FEAEAATAKV PPSIVNPQLR TGYHFHPPKN WINDPNAPMY YKGWYHFFYQ YNPKGAVWNN IVWAHSVSRD
101: LINWVALPTA LRPSIPSDRY GCWSGSATVL PDGTPVIMYT GINHPDINYQ VQNVAYPRNK SDPLLREWVK PSHMNPIIVP ERDINVTQFR DPTTAWRAAA
201: DGQWRLLIGS ATDGGSRGAA YVYRSRDFRR WTRVRRPLHS APATGMWECP DFYPVSSDDD GRRRRVGLET SVPSGPRVKH VLKNSLDLRR YDYYTVGTYH
301: RRAERYVPDD PAGDGDGERR VRYDYGNFYA SKTFYDPAKR RRILWGWANE SDTAADDVAK GWAGIQAIPR TVWLDPSGKQ LLQWPIEEVE ALRGKAVTLG
401: KTIIKAGHHV KVTGIQTAQA DVEVSFEVSP SALAGAERLD PALADDAERL CGVKRADVKG GVGPFGLWVL ASANLKERTA VFFRVFKAAA GSSNKHVVLM
501: CTDPTKSSLN PNLYRPTFAG FVDTDISNGK ISLRTLIDRS VVESFGAGGK TCILSRVYPS LAIGNKAHLY VFNNGRADVK VSRLIAWEMK KPVMNGAKI
Best Arabidopsis Sequence Match ( AT3G52600.1 )
(BLAST)
001: MSAPKFGYVL LLIVLINISN NGVDAFHKVF KKLQSKSTSL ESVSPLHRTA YHFQPPRHWI NDPNAPMLYK GVYHLFYQYN PKGAVWGNIV WAHSVSKDLI
101: NWEALEPAIY PSKWFDINGT WSGSATHVPG KGPVILYTGI TENQTQIQNY AIPQDLSDPY LKTWIKPDDN PIVKPDNGEN GSAFRDPTTA WFNKKDGYWR
201: MLVGSKRKNR GIAYMYKSRD FKKWVKSKRP IHSRKKTGMW ECPDFFPVSV TDKKNGLDFS YDGPNAKHVL KVSLDLTRYE YYTLGTYDTK KDRYRPDGYT
301: PDGWDGLRFD YGNYYASKTF FDDKTNRRIL WGWANESDTV QDDTVKGWAG IQLIPRTILL DSSGKQLVFW PIEEIESLRG KNVQMTNQKM EMGQRFEVQG
401: ITPAQVDVDV TFNVGNLEKA EKFDESFATK PLELCNLKGS NVNGGVGPFG LITLATSDLE EYTPVFFRVF KDAASNKPKV LMCSDAKPSS LKKDTGTDAK
501: ERMYKPSFAG FVDVGLLDGK ISLRSLIDHS VVESFGAKGK TVITSRVYPT KAVGEKAHLF VFNNGSQPVT VESLNAWNMQ KPLKMNQGAK
Arabidopsis Description
CWINV2Beta-fructofuranosidase, insoluble isoenzyme CWINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEF8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.