CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001943_P001	Maize	extracellular	86.87	84.59
HORVU2Hr1G109080.7	Barley	cytosol, peroxisome, vacuole	69.96	71.51
TraesCS2A01G488500.2	Wheat	peroxisome	69.78	71.06
TraesCS2D01G489400.1	Wheat	cytosol	70.5	70.89
TraesCS2B01G516300.1	Wheat	peroxisome	69.24	70.51
TraesCS2A01G489100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	69.96	70.34
TraesCS2B01G516900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	69.24	69.62
HORVU2Hr1G109210.1	Barley	cytosol, extracellular	16.73	65.03
EES13037	Sorghum	vacuole	67.09	63.22
Os04t0664900-01	Rice	cytosol, nucleus, vacuole	38.31	61.38
KXG27359	Sorghum	plastid	65.11	57.92
HORVU2Hr1G109200.2	Barley	vacuole	21.76	57.35
KXG30339	Sorghum	vacuole	48.2	46.13
EER93500	Sorghum	vacuole	47.12	45.25
EES10748	Sorghum	vacuole	48.02	44.95
OQU81521	Sorghum	vacuole	48.02	44.57
OQU81519	Sorghum	vacuole	47.12	43.81
OQU81520	Sorghum	vacuole	47.84	43.54
OQU88249	Sorghum	plastid, vacuole	48.92	43.11
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	40.29	33.23
OQU82023	Sorghum	plastid	39.75	31.39

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EntrezGene:8082558
UniProt:C5Y9Z2	InterPro:ConA-like_dom_sf	EnsemblPlants:EES13040	ProteinID:EES13040	ProteinID:EES13040.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF8
SMART:SM00640	EnsemblPlantsGene:SORBI_3006G255500	SUPFAM:SSF49899	SUPFAM:SSF75005	unigene:Sbi.7525	UniParc:UPI0001A87546
RefSeq:XP_002448712.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:59279446..59282158

Molecular Weight (calculated)

61442.8 Da

IEP (calculated)

5.444

GRAVY (calculated)

-0.391

Length

556 amino acids

Sequence
(BLAST)

001: MNGKQSLRHG RTAYHFQPAK NWMNDPNGPL YHKGMYHLFF QYNPHGPLFG TGKLSWGHSV SGDLVNWAFL GTALDPTSPF DAEGCWSGST TTLADGRPAI
101: LYTGRDANDV QVQNVAFPKN PSDPLLREWH KPSCNPVVPQ PADVTRNNFR DPTTAWLGRD GLWRFAVVAE VGGVGSTVVY RSADFVHWER NAAPLHASPD
201: VPVWECPDLF PVAERGTEGL DTSVSAGPGV RHVLKLSKAA DEDYYVVGRY DDETDTFAPV DDGDHDVRNW RRIDHGHLFG AKTFFDARKK RRVLWAWVDE
301: TDSRSDDVGK DWTGIQTFPR ALWLDADGKQ LVQWPVEEIE TLRRERVALV GAEIGSGGLH EIAGVDALQA DVEVVFDLPS LEDAEELDPK WLQDPQKLCV
401: YAEKKDASSP GPGGVGPFGL VVMASGDMRE QTTVFFRVFR HGGTYKVLMC ADLTRSSTKE GVHKPVYAGF VDVDVEKDRS ISLRTLIDHS VIESFGGGGR
501: TCITARVYPE HVVAGGSSHL YLFNNGAHPV TVSKLEAWEL GTASVNVEED YRVGTL

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.