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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 2
  • vacuole 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002830_P001 Maize extracellular 78.98 83.36
HORVU2Hr1G091990.6 Barley cytosol 25.71 73.88
TraesCS2B01G403000.1 Wheat vacuole 66.48 71.02
Os04t0535600-01 Rice extracellular, mitochondrion, plasma membrane 65.34 70.12
TraesCS2D01G382600.2 Wheat vacuole 65.91 69.98
TraesCS2A01G386100.2 Wheat plastid, vacuole 65.2 69.97
GSMUA_Achr5P19880_001 Banana mitochondrion, vacuole 53.84 67.44
GSMUA_Achr11P... Banana mitochondrion, vacuole 50.85 67.42
VIT_02s0154g00090.t01 Wine grape vacuole 47.87 64.31
VIT_16s0022g00670.t01 Wine grape cytosol 48.72 63.87
PGSC0003DMT400035987 Potato cytosol, extracellular 50.14 55.24
KRH39981 Soybean vacuole 49.15 54.92
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 52.56 54.9
KRH23803 Soybean vacuole 47.87 54.89
Solyc03g083910.2.1 Tomato extracellular 50.28 54.63
AT1G62660.1 Thale cress vacuole 49.57 53.86
KRH57351 Soybean endoplasmic reticulum 49.29 53.8
CDY39804 Canola vacuole 48.15 53.72
KRH04082 Soybean endoplasmic reticulum 48.86 53.33
CDY03265 Canola vacuole 47.73 53.25
CDY30056 Canola vacuole 49.57 52.96
CDY46906 Canola vacuole 49.15 52.91
Bra027030.1-P Field mustard vacuole 49.01 52.75
CDY31826 Canola vacuole 49.01 52.75
CDY03264 Canola cytosol, golgi, vacuole 45.31 52.64
KRH56348 Soybean vacuole 48.3 52.63
Bra019749.1-P Field mustard nucleus, peroxisome, vacuole 49.43 52.57
CDX98080 Canola cytosol, peroxisome, vacuole 49.29 52.42
Bra036653.1-P Field mustard vacuole 48.58 52.21
Bra036652.1-P Field mustard cytosol, golgi, plastid, vacuole 44.32 52.17
KRH77397 Soybean endoplasmic reticulum 50.0 52.15
KRH28036 Soybean vacuole 45.74 52.02
CDY39805 Canola cytosol, golgi, plastid, vacuole 44.74 51.98
AT1G12240.1 Thale cress vacuole 48.86 51.81
CDY26548 Canola vacuole 48.44 51.43
PGSC0003DMT400012217 Potato cytosol, peroxisome, plastid, vacuole 47.59 51.3
Solyc08g079080.2.1 Tomato unclear 47.3 51.07
CDY15984 Canola vacuole 48.3 50.0
Bra026984.1-P Field mustard vacuole 48.44 49.42
EER93500 Sorghum vacuole 36.22 44.04
OQU81521 Sorghum vacuole 36.22 42.57
KXG30339 Sorghum vacuole 34.66 42.0
EES10748 Sorghum vacuole 35.37 41.92
OQU81520 Sorghum vacuole 36.36 41.9
EES13037 Sorghum vacuole 33.81 40.34
EES13040 Sorghum mitochondrion 31.39 39.75
OQU81519 Sorghum vacuole 33.38 39.3
KXG27359 Sorghum plastid 31.25 35.2
OQU88249 Sorghum plastid, vacuole 31.11 34.71
Protein Annotations
Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2UniProt:A0A1Z5RE48InterPro:ConA-like_dom_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296
EnsemblPlants:OQU82023ProteinID:OQU82023ProteinID:OQU82023.1PFAM:PF00251PFAM:PF08244PANTHER:PTHR31953
PANTHER:PTHR31953:SF6SMART:SM00640EnsemblPlantsGene:SORBI_3006G160700SUPFAM:SSF49899SUPFAM:SSF75005UniParc:UPI000B8BA26A
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:51857641..51862595
Molecular Weight (calculated)
77050.2 Da
IEP (calculated)
6.736
GRAVY (calculated)
-0.251
Length
704 amino acids
Sequence
(BLAST)
001: MIPAVADPAT LDDVGASTPL LPETDPRGRA GAGQKRPPPP AATTTVLPAV VSAVLLLVLV ARRRRPCRRA GGGRLPWRGR GRVGEIHGPA PRRRRRRGRG
101: LFLDQRDAGV AAHGVPFPAP QELDERLVLD PSPSIADHAI VFFPRSGSNF VPRSCHGRLV HMPMPPIRHL PRPASPDPNG PLYHKGWYHL FYQWNPDSAV
201: WGNITWGHAV SRDLLHWLHL PLAMVPDHPY DANGVWSGSA TRLPDGRIVM LYTGSTAESV QVQNLAEPAD ASDPLLREWV KSDANPVLVP PPGIGATDFR
301: DPTTAWRAAN DDTNSKQAWR VAIGSKDRDH AGLALVYRTE DFVRYDPVPA LMHVVPGTGM WECVDFYPVA VAANNGDGLE TSVPPGPGVK HVVKASLDDD
401: KHDYYAIGTY DPATDTWTPD DAENDVGIGL RYDYGKYYAS KTFYDPVLRR RVLWGWVGET DSERADILKG WASVQSIPRT VLLDTKTGSN LLQWPVVEVE
501: NLRMSGKRFD DVALHRGSVV PLDVGKATQL DIEAVFEVDA AAVEGVTEAD VTFNCSTSAG AAGRGLLGPF GLLVLADEDL SEQTAVYFYL VKGTDGSLQT
601: FFCQDELRAS KANDLVKRVY GSLVPVLDGE NLSVRILVDH SIVESFAQGG RTCITSRVYP TRAIYDSARV FLFNNATDVH VKAKSVKIWQ LNSAYIRPYE
701: ASSL
Best Arabidopsis Sequence Match ( AT1G62660.2 )
(BLAST)
001: MLFCCLSNGV VNGKFLASSS ADPNGPLFYK GWYHFFYQYN PNAAVWGDIV WGHAVSKDLI HWLYLPIAMV PDQWYDANGV WTGSATFLDD GSIVMLYTGS
101: TDEFVQVQNL AYPEDPSDPL LLKWVKFSGN PVLVPPPGIG AKDFRDPTTA WKTSSGKWRI TIGSKINRTG ISLIYDTTDF KTYEKHETLL HQVPNTGMWE
201: CVDFYPVSKT QLNGLDTSVN GPDVKHVIKA SMDDTRIDHY AIGTYDDSNA TWVPDNPSID VGISTGLRYD YGKYYASKTF YDQNKGRRIL WGWIGESDSE
301: AADVQKGWSS VQGIPRTVVL DTRTHKNLVQ WPVEEIKSLR LSSKKFDMTI GPGTVVPVDV GSATQLDIEA EFEIKTDDLK LFFDDDSVEA DNKFSCETNG
401: GSTARGALGP FGFSVLADEG LSEQTPVYFY VTKGKHSKLN TVFCTDTSRS TLANDVVKPI YGSFVPVLKG EKLTMRILVD HSIVEGFAQG GRSCITSRVY
501: PTKAIYGATK LFLFNNAIDA TVTASFTVWQ MNNAFIHPYS SDDLGVPSST
Arabidopsis Description
BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.