Factsheet for VIT_02s0154g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 8
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_10s0003g01830.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12240.1	VIT_10s0003g01830.t01	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	34.73	89.22
VIT_16s0022g00670.t01	Wine grape	cytosol	64.69	63.13
HORVU2Hr1G091990.6	Barley	cytosol	29.2	62.45
GSMUA_Achr5P19880_001	Banana	mitochondrion, vacuole	64.69	60.32
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	63.74	60.29
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	60.5	59.7
KRH04082	Soybean	endoplasmic reticulum	71.56	58.14
KRH57351	Soybean	endoplasmic reticulum	71.37	57.98
CDY30056	Canola	vacuole	70.42	55.99
KRH28036	Soybean	vacuole	65.84	55.74
CDX98080	Canola	cytosol, peroxisome, vacuole	70.23	55.59
KRH77397	Soybean	endoplasmic reticulum	71.37	55.41
AT1G62660.1	Thale cress	vacuole	68.51	55.4
CDY26548	Canola	vacuole	70.04	55.35
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	69.66	55.14
TraesCS4A01G485500.1	Wheat	mitochondrion	53.24	54.81
TraesCS7D01G009300.1	Wheat	mitochondrion	53.24	54.81
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	68.13	54.67
CDY03265	Canola	vacuole	65.65	54.52
AT1G12240.1	Thale cress	vacuole	68.89	54.37
CDY39804	Canola	vacuole	65.46	54.36
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	61.83	54.18
CDY03264	Canola	cytosol, golgi, vacuole	62.6	54.13
Solyc08g079080.2.1	Tomato	unclear	67.18	53.99
CDY15984	Canola	vacuole	69.66	53.68
CDY46906	Canola	vacuole	66.98	53.67
Bra027030.1-P	Field mustard	vacuole	66.98	53.67
CDY39805	Canola	cytosol, golgi, plastid, vacuole	62.02	53.63
CDY31826	Canola	vacuole	66.79	53.52
Bra026984.1-P	Field mustard	vacuole	70.23	53.33
Bra036653.1-P	Field mustard	vacuole	66.41	53.13
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	66.41	53.05
Zm00001d002830_P001	Maize	extracellular	64.89	50.97
TraesCS2B01G403000.1	Wheat	vacuole	63.93	50.83
TraesCS2D01G382600.2	Wheat	vacuole	63.55	50.23
Zm00001d025943_P001	Maize	vacuole	64.12	50.22
TraesCS2A01G386100.2	Wheat	plastid, vacuole	62.79	50.15
Os02t0106100-01	Rice	plasma membrane	60.69	48.04
OQU82023	Sorghum	plastid	64.31	47.87
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	60.88	47.33
Zm00001d014947_P001	Maize	plasma membrane	60.69	47.25
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.16	47.18
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	58.97	46.96
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	58.97	46.96
Zm00001d054075_P001	Maize	plastid, vacuole	49.05	46.9
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	58.4	46.36
HORVU0Hr1G018850.4	Barley	vacuole	54.2	46.25
HORVU6Hr1G004000.2	Barley	endoplasmic reticulum, peroxisome, vacuole	58.02	46.06
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	53.44	45.98
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	58.59	45.75
HORVU7Hr1G000270.1	Barley	mitochondrion	55.73	45.7
TraesCS4A01G485800.1	Wheat	vacuole	56.49	45.68
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	58.02	45.58
TraesCS6A01G023100.1	Wheat	vacuole	58.59	45.55
TraesCS7D01G008900.1	Wheat	vacuole	56.3	45.52
TraesCS4A01G485400.2	Wheat	golgi	53.44	45.45
TraesCS7A01G009400.1	Wheat	vacuole	56.3	45.45
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	58.21	45.39
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	58.02	45.37
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	58.21	45.32
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	58.59	45.28
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	58.4	45.27
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	58.02	45.17
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	58.02	44.97
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	57.63	44.87
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	22.14	44.79
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.29	44.7
TraesCS7A01G009800.2	Wheat	golgi, unclear	52.86	44.68
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	57.82	44.62
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	52.86	44.61
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	55.53	44.02
TraesCS4A01G486000.1	Wheat	golgi	55.53	43.83
TraesCS7D01G008700.1	Wheat	vacuole	55.34	43.81
TraesCS7A01G009500.3	Wheat	plastid	54.01	43.74
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	53.44	43.21
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	53.05	43.17
TraesCS7A01G009600.3	Wheat	mitochondrion	53.63	43.1
TraesCS7A01G009200.2	Wheat	vacuole	53.24	43.06
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	53.05	42.77
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	52.48	42.77
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	54.39	42.73
TraesCS7D01G055000.1	Wheat	plastid	52.1	42.46
HORVU7Hr1G000250.3	Barley	vacuole	53.05	42.31
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	54.01	42.3
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	51.72	42.15
HORVU7Hr1G001040.6	Barley	plastid	53.44	41.98
VIT_09s0002g02320.t01	Wine grape	vacuole	45.61	41.78
VIT_04s0008g01150.t01	Wine grape	vacuole	44.66	40.98
VIT_08s0007g03060.t01	Wine grape	vacuole	43.89	40.42
VIT_06s0004g08000.t01	Wine grape	vacuole	14.69	40.31
HORVU7Hr1G000260.1	Barley	plastid	55.53	40.19
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	53.05	39.66
TraesCS7A01G060300.2	Wheat	mitochondrion	52.29	39.03
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	43.51	37.56
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	53.24	36.9

Protein Annotations

EntrezGene:100241232	wikigene:100241232	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	ProteinID:CCB56498
ProteinID:CCB56498.1	InterPro:ConA-like_dom_sf	UniProt:F6HP92	EMBL:FN596001	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004564	GO:GO:0004575	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	EntrezGene:LOC100241232	wikigene:LOC100241232
PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF31	SMART:SM00640	SUPFAM:SSF49899
SUPFAM:SSF75005	TIGR:TC52500	TIGR:TC57719	UniParc:UPI0002108289	ArrayExpress:VIT_02s0154g00090	EnsemblPlantsGene:VIT_02s0154g00090
EnsemblPlants:VIT_02s0154g00090.t01	unigene:Vvi.6988	RefSeq:XP_002272809	RefSeq:XP_002272809.2	:	:

Description

No Description!

Coordinates

chr2:-:4882119..4884315

Molecular Weight (calculated)

58316.7 Da

IEP (calculated)

4.892

GRAVY (calculated)

-0.286

Length

524 amino acids

Sequence
(BLAST)

001: MSNGFLLFVG PMFYGGWYHF FYQYNPDAAV WGNIVWGHAV SKDLIEWLHL PLAMVADQWY DTNGVWTGSA TLLSDGQVIM LYTGATNESV QVQNLAYPAD
101: LSDPLLVDWV KYPGNPVLVP PPGIDDRDFR DPTTAWYWPD GKWRIAIGSK VNKTGISLVY NTEDFKKYEL IEGVLHAVPG TGMWECVDLY PVSLKEDNGL
201: DTSFNGPGVK HVLKASLDDD KNDYYAIGTY SLESGNWTPD NSNLDVGIGL RYDYGKFYAS KTFYDQNKQR RILWGWIGET DGESADIKKG WASVQSIPRT
301: VVFDKKTGTN ILQWPVAEIK SLRKSSKKFD KLEVGPGSVV TLEVEKATQM DITAEFEIDK EALKRIGESD VEYSCGTSGG SAQRGELGPF GLLLLADEGR
401: CEQTPVYFYV AKGTDGQLKT FFCTDESRSS LANDVDKRIF GSTVPVIKGE KLSMRILVDH SIIESFAQGG RTCITSRVYP TKAIYGAAQL YVFNNATSAS
501: ITASIQTWAM KSAYIRPYSS HQES

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.