Factsheet for GSMUA_Achr5P19880_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

plastid 2
vacuole 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12240.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	76.51	80.98
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	68.15	69.13
HORVU2Hr1G091990.6	Barley	cytosol	29.89	68.57
VIT_16s0022g00670.t01	Wine grape	cytosol	64.59	67.6
VIT_02s0154g00090.t01	Wine grape	vacuole	60.32	64.69
TraesCS2B01G403000.1	Wheat	vacuole	70.46	60.09
TraesCS2A01G386100.2	Wheat	plastid, vacuole	69.93	59.91
TraesCS2D01G382600.2	Wheat	vacuole	70.64	59.88
Zm00001d002830_P001	Maize	extracellular	69.93	58.92
Zm00001d025943_P001	Maize	vacuole	70.11	58.89
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	68.33	58.54
KRH57351	Soybean	endoplasmic reticulum	63.52	55.35
KRH04082	Soybean	endoplasmic reticulum	63.17	55.04
PGSC0003DMT400035987	Potato	cytosol, extracellular	62.28	54.77
KRH39981	Soybean	vacuole	61.03	54.44
KRH23803	Soybean	vacuole	59.43	54.4
Solyc03g083910.2.1	Tomato	extracellular	62.63	54.32
CDY39804	Canola	vacuole	60.68	54.04
KRH56348	Soybean	vacuole	62.1	54.02
OQU82023	Sorghum	plastid	67.44	53.84
CDY03265	Canola	vacuole	60.14	53.57
AT1G62660.1	Thale cress	vacuole	61.21	53.09
Solyc08g079080.2.1	Tomato	unclear	61.39	52.91
Bra036653.1-P	Field mustard	vacuole	61.57	52.82
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	61.21	52.68
CDY30056	Canola	vacuole	61.57	52.5
CDY46906	Canola	vacuole	61.03	52.45
CDY31826	Canola	vacuole	61.03	52.45
KRH77397	Soybean	endoplasmic reticulum	62.81	52.3
Bra027030.1-P	Field mustard	vacuole	60.85	52.29
KRH28036	Soybean	vacuole	57.3	52.02
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	61.03	51.81
CDX98080	Canola	cytosol, peroxisome, vacuole	60.85	51.66
AT1G12240.1	Thale cress	vacuole	60.85	51.51
CDY26548	Canola	vacuole	60.68	51.43
CDY03264	Canola	cytosol, golgi, vacuole	54.98	50.99
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	53.56	50.33
CDY39805	Canola	cytosol, golgi, plastid, vacuole	54.27	50.33
CDY15984	Canola	vacuole	60.32	49.85
Bra026984.1-P	Field mustard	vacuole	60.68	49.42
GSMUA_Achr4P29900_001	Banana	golgi, vacuole	41.99	40.34
GSMUA_Achr6P13170_001	Banana	vacuole	41.99	40.2
GSMUA_Achr6P13160_001	Banana	vacuole	41.81	40.17
GSMUA_AchrUn_...	Banana	vacuole	38.79	40.0
GSMUA_Achr10P...	Banana	vacuole	9.07	35.17

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
EnsemblPlantsGene:GSMUA_Achr5G19880_001	EnsemblPlants:GSMUA_Achr5P19880_001	EnsemblPlants:GSMUA_Achr5T19880_001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M0T017	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953
PANTHER:PTHR31953:SF6	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI000294F85E	:

Description

Beta-fructofuranosidase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19880_001]

Coordinates

chr5:+:21498016..21502219

Molecular Weight (calculated)

62423.3 Da

IEP (calculated)

5.303

GRAVY (calculated)

-0.162

Length

562 amino acids

Sequence
(BLAST)

001: MLLWQRTAFH FQPQKNWMNG QPYPDGPTYY KGWYHLFYQY NPDSAVWGNI SWGHAVSRDL VHWLYLPLAM VPDRWYDANG VWTGSATTLP DGRLVMIYTG
101: ATMESVQVQN LAFPADPDDP LLVHWVKSEC NPVIVPPSGI GLKDFRDPTT AWFVPADSAW RVAIGSKNDS QHHAGIVLVY RTTDFVSYEL LPGVLHSVTG
201: TGMWECVDFY PVSTESAVGL DTTAASGPGV KHVLKASMDD NRHDYYAIGT YVAASNSWVP DDPEKDVGIG LRYDYGKYYA SKTFYDPVKE RRVLWGWIGE
301: TDSERTDLRK GWASLQTVPR TVVFDQKTGS NLLQWPVEEV ESLRLSSQEF SNISITAGSV VPLDIGKATQ LDIVAEFSVD EAALAGAIGA DVGYNCSTSR
401: GAAQRGVIGP FGLLVLADED LSEQTAVYFY VARATDGSLS THFCHDELRH ARIFLFSSSE ANDLVKRVYG SLVPVLDGET FSLRILVDHS IVESFAQGGR
501: TCITSRVYPT KAIFSRARLF LLNNATGVDV TATSVKIWQM NSAFIRPFYE RDSASSIRTS NN

Best Arabidopsis Sequence Match ( AT1G62660.1 )
(BLAST)

001: MASTEALLPV TSLQDPLSES RSDQIPETRR RRPIKVHLAV YSGLLLIALY VTLIVTHDGS KAEIATESRP RMAGVSEKSN DGVWISSDDG KVEAFPWNNT
101: ILSWQRTAFH FQPEKNWMND PNGPLFYKGW YHFFYQYNPN AAVWGDIVWG HAVSKDLIHW LYLPIAMVPD QWYDANGVWT GSATFLDDGS IVMLYTGSTD
201: EFVQVQNLAY PEDPSDPLLL KWVKFSGNPV LVPPPGIGAK DFRDPTTAWK TSSGKWRITI GSKINRTGIS LIYDTTDFKT YEKHETLLHQ VPNTGMWECV
301: DFYPVSKTQL NGLDTSVNGP DVKHVIKASM DDTRIDHYAI GTYDDSNATW VPDNPSIDVG ISTGLRYDYG KYYASKTFYD QNKGRRILWG WIGESDSEAA
401: DVQKGWSSVQ GIPRTVVLDT RTHKNLVQWP VEEIKSLRLS SKKFDMTIGP GTVVPVDVGS ATQLDIEAEF EIKTDDLKLF FDDDSVEADN KFSCETNGGS
501: TARGALGPFG FSVLADEGLS EQTPVYFYVT KGKHSKLNTV FCTDTSRSTL ANDVVKPIYG SFVPVLKGEK LTMRILVDHS IVEGFAQGGR SCITSRVYPT
601: KAIYGATKLF LFNNAIDATV TASFTVWQMN NAFIHPYSSD DLGVPSST

Arabidopsis Description

BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.