Factsheet for PGSC0003DMT400035987

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 2
vacuole 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g083910.2.1	Tomato	extracellular	95.77	94.44
VIT_16s0022g00670.t01	Wine grape	cytosol	57.12	67.97
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	53.68	64.6
GSMUA_Achr5P19880_001	Banana	mitochondrion, vacuole	54.77	62.28
HORVU2Hr1G091990.6	Barley	cytosol	23.63	61.63
KRH39981	Soybean	vacuole	59.62	60.48
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	51.96	59.93
KRH23803	Soybean	vacuole	57.12	59.45
KRH56348	Soybean	vacuole	59.62	58.98
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	58.22	56.97
TraesCS2B01G403000.1	Wheat	vacuole	58.22	56.45
TraesCS2D01G382600.2	Wheat	vacuole	58.37	56.26
TraesCS2A01G386100.2	Wheat	plastid, vacuole	57.75	56.25
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	57.59	56.1
Zm00001d002830_P001	Maize	extracellular	58.22	55.77
Zm00001d025943_P001	Maize	vacuole	58.22	55.61
TraesCS4A01G485500.1	Wheat	mitochondrion	42.57	53.44
TraesCS7D01G009300.1	Wheat	mitochondrion	42.1	52.85
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	55.4	52.52
Zm00001d014947_P001	Maize	plasma membrane	55.24	52.45
Zm00001d054075_P001	Maize	plastid, vacuole	44.6	52.01
Os02t0106100-01	Rice	plasma membrane	53.52	51.66
HORVU6Hr1G004000.2	Barley	endoplasmic reticulum, peroxisome, vacuole	53.21	51.52
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.9	51.37
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.9	51.37
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.74	51.29
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	53.52	50.89
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	53.21	50.75
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	52.74	50.52
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	52.11	50.45
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.74	50.22
OQU82023	Sorghum	plastid	55.24	50.14
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	53.21	50.07
TraesCS6A01G023100.1	Wheat	vacuole	52.74	50.0
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	52.9	50.0
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.58	49.93
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	52.58	49.93
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	52.74	49.7
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	52.43	49.56
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	52.11	49.48
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	46.48	48.77
HORVU0Hr1G018850.4	Barley	vacuole	46.48	48.37
TraesCS4A01G486000.1	Wheat	golgi	50.08	48.19
TraesCS7D01G008700.1	Wheat	vacuole	49.92	48.19
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	49.77	48.11
TraesCS7A01G009400.1	Wheat	vacuole	48.83	48.07
TraesCS4A01G485800.1	Wheat	vacuole	48.67	47.99
TraesCS4A01G485400.2	Wheat	golgi	46.17	47.89
HORVU7Hr1G000270.1	Barley	mitochondrion	47.89	47.89
TraesCS7D01G008900.1	Wheat	vacuole	48.36	47.69
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	45.7	47.63
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	48.2	47.38
TraesCS7A01G009800.2	Wheat	golgi, unclear	45.85	47.26
TraesCS7A01G009600.3	Wheat	mitochondrion	47.89	46.93
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	45.54	46.86
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	46.95	46.66
TraesCS7D01G055000.1	Wheat	plastid	46.79	46.5
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	47.1	46.45
TraesCS7A01G009200.2	Wheat	vacuole	46.95	46.3
HORVU7Hr1G000250.3	Barley	vacuole	47.57	46.27
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	46.17	45.81
TraesCS7A01G009500.3	Wheat	plastid	45.7	45.13
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	45.23	44.95
HORVU7Hr1G001040.6	Barley	plastid	46.32	44.38
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	35.52	44.25
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	46.01	44.08
HORVU7Hr1G000260.1	Barley	plastid	49.92	44.06
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	48.04	43.79
TraesCS7A01G060300.2	Wheat	mitochondrion	47.73	43.45
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	45.38	43.35
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	17.53	43.24
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	34.27	43.2
PGSC0003DMT400072608	Potato	extracellular	39.28	43.13
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	34.12	42.58
PGSC0003DMT400006639	Potato	vacuole	37.72	42.21
PGSC0003DMT400021619	Potato	cytosol	33.8	42.19
PGSC0003DMT400072606	Potato	cytosol	35.21	41.98
PGSC0003DMT400028670	Potato	golgi, vacuole	37.09	41.22
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	47.89	40.48
PGSC0003DMT400093309	Potato	cytosol	5.16	40.24
PGSC0003DMT400097344	Potato	cytosol	9.23	38.06
PGSC0003DMT400071784	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	15.18	37.6

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	ProteinID:AAA50305
ProteinID:AAA50305.1	ProteinID:AAQ17074	ProteinID:AAQ17074.1	ProteinID:ABF18956	ProteinID:ABF18956.1	ProteinID:ACC93584
ProteinID:ACC93584.1	ProteinID:ACC93585	ProteinID:ACC93585.1	ProteinID:ADM47340	ProteinID:ADM47340.1	ProteinID:AEV46287
ProteinID:AEV46287.1	ProteinID:AEV46288	ProteinID:AEV46288.1	ProteinID:AEV46289	ProteinID:AEV46289.1	ProteinID:AEV46290
ProteinID:AEV46290.1	ProteinID:AEV46291	ProteinID:AEV46291.1	ProteinID:AEV46292	ProteinID:AEV46292.1	ProteinID:AEV46293
ProteinID:AEV46293.1	ProteinID:AEV46294	ProteinID:AEV46294.1	ProteinID:AEV46295	ProteinID:AEV46295.1	ProteinID:AEV46296
ProteinID:AEV46296.1	ProteinID:AEV46297	ProteinID:AEV46297.1	EMBL:AY341425	InterPro:Beta-fructofuranosidase	ProteinID:CAA49831
ProteinID:CAA49831.1	InterPro:ConA-like_dom_sf	EMBL:DQ478950	UniProt:E1AXT4	EMBL:EU622806	EMBL:EU622807
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564	GO:GO:0004575	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
EMBL:HQ110080	InterPro:IPR023296	EMBL:JN661852	EMBL:JN661853	EMBL:JN661854	EMBL:JN661855
EMBL:JN661856	EMBL:JN661857	EMBL:JN661858	EMBL:JN661859	EMBL:JN661860	EMBL:JN661861
EMBL:JN661862	EMBL:L29099	PFAM:PF00251	PFAM:PF08244	PFAM:PF11837	EnsemblPlantsGene:PGSC0003DMG400013856
PGSC:PGSC0003DMG400013856	EnsemblPlants:PGSC0003DMT400035987	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF6	SMART:SM00640
SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix	UniParc:UPI0001E431D6	EMBL:X70368	SEG:seg

Description

Vacuolar invertase [Source:PGSC_GENE;Acc:PGSC0003DMG400013856]

Coordinates

chr3:+:39255053..39259538

Molecular Weight (calculated)

70677.1 Da

IEP (calculated)

5.797

GRAVY (calculated)

-0.278

Length

639 amino acids

Sequence
(BLAST)

001: MATQYHSSYD LENSASHYTF LPDQPDSGHR KSLKIISGIF LSSFLLLSVA FFPILNNQSP DLQSNSRSPA PPSRGVSQGV SDKTFRDVVN ASHVSYAWSN
101: AMLSWQRTAY HFQPQKNWMN DPNGPLYHKG WYHLFYQYNP DSAIWGNITW GHAVSKDLIH WLYLPFAMVP DQWYDINGVW TGSATILPDG QIMMLYTGDT
201: DDYVQVQNLA YPTNLSDPLL LDWVKYKGNP VLVPPPGIGV KDFRDPTTAW TGPQNGQWLL TIGSKIGKTG IALVYETSNF TSFKLLDEVL HAVPGTGMWE
301: CVDFYPVSTE KTNGLDTSYN GPGVKHVLKA SLDDNKQDHY AIGTYDLTKN KWTPDNPELD CGIGLKLDYG KYYASKTFYD PKKQRRVLWG WIGETDSESA
401: DLQKGWASVQ SIPRTVLYDK KTGTHLLQWP VEEIESLRAG DPIVKQVNLQ PGSIELLHVD SAAELDIEAS FEVDKVALQG IIEADHVGFS CSTSGGAASR
501: GILGPFGVVV IADQTLSELT PVYFYISKGA DGRAETHFCA DQTRSSEAPG VAKQVYGSSV PVLDGEKHSM RLLVDHSIVE SFAQGGRTVI TSRIYPTKAV
601: NGAARLFVFN NATGSSVTAS VKIWSLESAN IQSFPLQDL

Best Arabidopsis Sequence Match ( AT1G62660.1 )
(BLAST)

001: MASTEALLPV TSLQDPLSES RSDQIPETRR RRPIKVHLAV YSGLLLIALY VTLIVTHDGS KAEIATESRP RMAGVSEKSN DGVWISSDDG KVEAFPWNNT
101: ILSWQRTAFH FQPEKNWMND PNGPLFYKGW YHFFYQYNPN AAVWGDIVWG HAVSKDLIHW LYLPIAMVPD QWYDANGVWT GSATFLDDGS IVMLYTGSTD
201: EFVQVQNLAY PEDPSDPLLL KWVKFSGNPV LVPPPGIGAK DFRDPTTAWK TSSGKWRITI GSKINRTGIS LIYDTTDFKT YEKHETLLHQ VPNTGMWECV
301: DFYPVSKTQL NGLDTSVNGP DVKHVIKASM DDTRIDHYAI GTYDDSNATW VPDNPSIDVG ISTGLRYDYG KYYASKTFYD QNKGRRILWG WIGESDSEAA
401: DVQKGWSSVQ GIPRTVVLDT RTHKNLVQWP VEEIKSLRLS SKKFDMTIGP GTVVPVDVGS ATQLDIEAEF EIKTDDLKLF FDDDSVEADN KFSCETNGGS
501: TARGALGPFG FSVLADEGLS EQTPVYFYVT KGKHSKLNTV FCTDTSRSTL ANDVVKPIYG SFVPVLKGEK LTMRILVDHS IVEGFAQGGR SCITSRVYPT
601: KAIYGATKLF LFNNAIDATV TASFTVWQMN NAFIHPYSSD DLGVPSST

Arabidopsis Description

BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.