Factsheet for PGSC0003DMT400083254

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, peroxisome, nucleus

Predictor Summary:

nucleus 2
vacuole 2
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g064620.2.1	Tomato	mitochondrion	94.87	85.89
PGSC0003DMT400071784	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	35.11	68.99
PGSC0003DMT400006639	Potato	vacuole	59.96	53.24
VIT_09s0002g02320.t01	Wine grape	vacuole	59.76	52.97
Bra027398.1-P	Field mustard	cytosol	51.48	52.94
Bra037980.1-P	Field mustard	vacuole	59.57	52.52
CDY33067	Canola	vacuole	59.57	52.16
CDY24053	Canola	vacuole	59.37	51.99
KRH44130	Soybean	vacuole	57.79	51.95
AT1G55120.1	Thale cress	vacuole	60.75	51.85
KRH44129	Soybean	vacuole	52.47	51.75
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	51.87	51.27
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	51.68	51.17
KRH47104	Soybean	nucleus	56.8	51.06
PGSC0003DMT400021619	Potato	cytosol	51.28	50.78
Bra021508.1-P	Field mustard	vacuole	57.79	50.6
AT3G13790.1	Thale cress	vacuole	57.99	50.34
CDY51739	Canola	vacuole	57.99	50.26
PGSC0003DMT400072606	Potato	cytosol	53.06	50.19
CDY37487	Canola	vacuole	57.79	50.17
Bra027397.1-P	Field mustard	vacuole	57.0	49.83
KRH10019	Soybean	nucleus, vacuole	56.02	49.39
CDX97519	Canola	vacuole	56.8	49.32
KRH23303	Soybean	nucleus	55.82	49.3
PGSC0003DMT400093309	Potato	cytosol	7.89	48.78
CDX97518	Canola	endoplasmic reticulum, vacuole	54.44	48.25
CDY23643	Canola	vacuole	50.3	48.11
AT3G13784.2	Thale cress	vacuole	53.65	47.55
PGSC0003DMT400072608	Potato	extracellular	53.85	46.91
CDY23644	Canola	vacuole	55.62	46.61
PGSC0003DMT400028670	Potato	golgi, vacuole	52.27	46.09
PGSC0003DMT400097344	Potato	cytosol	12.43	40.65
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	44.58	34.61
PGSC0003DMT400035987	Potato	cytosol, extracellular	43.2	34.27

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004564	GO:GO:0004575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	UniProt:M1D6S8	PFAM:PF00251	PFAM:PF08244	EnsemblPlantsGene:PGSC0003DMG400033142	PGSC:PGSC0003DMG400033142
EnsemblPlants:PGSC0003DMT400083254	PANTHER:PTHR31953	PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
UniParc:UPI000295E4DE	:	:	:	:	:

Description

Beta-fructofuranosidase, cell wall isozyme [Source:PGSC_GENE;Acc:PGSC0003DMG400033142]

Coordinates

chr6:+:47625949..47629206

Molecular Weight (calculated)

56843.6 Da

IEP (calculated)

4.857

GRAVY (calculated)

-0.360

Length

507 amino acids

Sequence
(BLAST)

001: MIYKGIYHLF YQYNPESAEW GNIAWGHSTS TDLVNWTIHP PALLPSDTYD INGCWSGSAT ILQDGTPAIL YTGGDSQNVQ LQNLAVPKDP SDPYLVEWVK
101: SPHNPIMTPN EEEKESFRDP TTAWLGPDGI WRVVIGNERK NRGTSVLYKS KDFVHWTEAE RPLHSSSETT MWECPDLFPV LIDGENALDI SEIFSGIKHV
201: LKNSVARSFV DYYTVGVYDH HNDVYTPDEG SVDNESGLRL DYGRYYASKS FFDSEKKRRI FIAWVNESTS REIDLIKGWS GLQSFPRKIW LDKGGKQLIQ
301: WPVEEIETLR TNKVDLQNIT LEAGSKREIS GVTAAQADVE ISFSIPIAVL EQAEVLESSW TNPQEMAKKS GSSANTGVGP FGLLVLASNN IEEYTAIFFR
401: IFKKNDKFVV LMGCDQKRSS VGLEYDKTNY GAFLDIDPLT EKLSLRTLID HSIVESFGGG GKACITTRAY PTLAINDNAH IFVFNNGSQH VDISTLSAWS
501: LNQAHIN

Best Arabidopsis Sequence Match ( AT1G55120.4 )
(BLAST)

001: MKSNSTNKNK NPDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ
101: NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF
201: PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK
301: GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG
401: PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL
501: AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.