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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37487 Canola vacuole 94.01 94.01
Bra021508.1-P Field mustard vacuole 93.15 93.96
CDY51739 Canola vacuole 94.01 93.85
Bra027397.1-P Field mustard vacuole 92.47 93.1
CDX97519 Canola vacuole 92.81 92.81
CDY23644 Canola vacuole 89.73 86.61
AT3G13784.2 Thale cress vacuole 67.12 68.53
AT1G55120.1 Thale cress vacuole 68.66 67.51
VIT_09s0002g02320.t01 Wine grape vacuole 65.58 66.96
KRH44130 Soybean vacuole 63.36 65.6
KRH47104 Soybean nucleus 62.67 64.89
KRH10019 Soybean nucleus, vacuole 62.67 63.65
KRH23303 Soybean nucleus 62.5 63.59
KRH44129 Soybean vacuole 54.45 61.87
PGSC0003DMT400083254 Potato nucleus, peroxisome, vacuole 50.34 57.99
PGSC0003DMT400006639 Potato vacuole 53.25 54.47
Solyc06g064620.2.1 Tomato mitochondrion 52.05 54.29
Solyc03g121680.1.1 Tomato vacuole 52.57 53.77
AT3G52600.1 Thale cress vacuole 53.94 53.39
AT2G36190.1 Thale cress vacuole 51.37 50.76
AT5G11920.1 Thale cress cytosol 46.92 49.82
AT1G62660.1 Thale cress vacuole 44.18 39.81
AT1G12240.1 Thale cress vacuole 41.95 36.9
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560PDB:2AC1PDB:2OXB
PDB:2QQUPDB:2QQVPDB:2QQWPDB:2XQRMapMan:3.1.4.1.1EntrezGene:820591
ProteinID:AEE75414.1ArrayExpress:AT3G13790EnsemblPlantsGene:AT3G13790RefSeq:AT3G13790TAIR:AT3G13790RefSeq:AT3G13790-TAIR-G
EnsemblPlants:AT3G13790.1TAIR:AT3G13790.1Symbol:ATBFRUCT1Symbol:ATCWINV1EMBL:AY045776EMBL:AY079422
ProteinID:BAB01930.1InterPro:ConA-like_dom_sfGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004564
GO:GO:0004575GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009607GO:GO:0009611GO:GO:0009628GO:GO:0016020GO:GO:0016787
GO:GO:0016798GO:GO:0030312GO:GO:0048046GO:GO:0050832GO:GO:0080167InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296RefSeq:NP_001189881.1
RefSeq:NP_566464.1PFAM:PF00251PFAM:PF08244PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0006340PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF16UniProt:Q43866
SMART:SM00640SUPFAM:SSF49899SUPFAM:SSF75005SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000ACE10
EMBL:X74514EMBL:X74515SEG:seg:::
Description
CWINV1Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Source:UniProtKB/Swiss-Prot;Acc:Q43866]
Coordinates
chr3:-:4532762..4535869
Molecular Weight (calculated)
66283.8 Da
IEP (calculated)
9.465
GRAVY (calculated)
-0.471
Length
584 amino acids
Sequence
(BLAST)
001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNDPNGP MIYKGIYHLF YQWNPKGAVW GNIVWAHSTS
101: TDLINWDPHP PAIFPSAPFD INGCWSGSAT ILPNGKPVIL YTGIDPKNQQ VQNIAEPKNL SDPYLREWKK SPLNPLMAPD AVNGINASSF RDPTTAWLGQ
201: DKKWRVIIGS KIHRRGLAIT YTSKDFLKWE KSPEPLHYDD GSGMWECPDF FPVTRFGSNG VETSSFGEPN EILKHVLKIS LDDTKHDYYT IGTYDRVKDK
301: FVPDNGFKMD GTAPRYDYGK YYASKTFFDS AKNRRILWGW TNESSSVEDD VEKGWSGIQT IPRKIWLDRS GKQLIQWPVR EVERLRTKQV KNLRNKVLKS
401: GSRLEVYGVT AAQADVEVLF KVRDLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVLM CSDQSRSSLK
501: EDNDKTTYGA FVDINPHQPL SLRALIDHSV VESFGGKGRA CITSRVYPKL AIGKSSHLFA FNYGYQSVDV LNLNAWSMNS AQIS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.