Factsheet for Bra027398.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97518	Canola	endoplasmic reticulum, vacuole	97.77	84.27
AT3G13784.2	Thale cress	vacuole	82.76	71.33
Bra027397.1-P	Field mustard	vacuole	70.79	60.17
Bra021508.1-P	Field mustard	vacuole	70.18	59.76
Bra037980.1-P	Field mustard	vacuole	68.97	59.13
VIT_09s0002g02320.t01	Wine grape	vacuole	61.46	52.97
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	52.94	51.48
KRH44130	Soybean	vacuole	58.62	51.24
KRH47104	Soybean	nucleus	58.42	51.06
KRH23303	Soybean	nucleus	58.22	50.0
KRH10019	Soybean	nucleus, vacuole	58.22	49.91
KRH44129	Soybean	vacuole	50.91	48.83
PGSC0003DMT400006639	Potato	vacuole	55.17	47.64
Bra017257.1-P	Field mustard	cytosol	40.37	47.61
Solyc03g121680.1.1	Tomato	vacuole	54.77	47.29
Solyc06g064620.2.1	Tomato	mitochondrion	52.94	46.61
Bra008926.1-P	Field mustard	mitochondrion, vacuole	46.45	44.47
Bra033419.1-P	Field mustard	vacuole	50.1	41.72
Bra023053.1-P	Field mustard	vacuole	49.49	41.57
Bra036653.1-P	Field mustard	vacuole	43.0	32.37
Bra027030.1-P	Field mustard	vacuole	42.39	31.96
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	41.38	30.82
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	36.31	29.93
Bra026984.1-P	Field mustard	vacuole	40.77	29.13
Bra006129.1-P	Field mustard	cytosol, nucleus, vacuole	41.18	25.38
Bra006130.1-P	Field mustard	cytosol	7.91	15.92

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EnsemblPlantsGene:Bra027398	EnsemblPlants:Bra027398.1	EnsemblPlants:Bra027398.1-P
InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M4EF36	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953
PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI0002547F8A	SEG:seg

Description

AT3G13784 (E=4e-239) AtcwINV5 | AtcwINV5 (Arabidopsis thaliana cell wall invertase 5); hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA05:+:20712080..20713708

Molecular Weight (calculated)

55024.0 Da

IEP (calculated)

9.541

GRAVY (calculated)

-0.444

Length

493 amino acids

Sequence
(BLAST)

001: MKVNEIVWGH ATSKDLINWT PHSPAIKPSR PSDINGCWSG SVTVLPSGKP VILYTGNDVN NHQVQNLAKP KNLSDPYLRH WTKSPVNPLV TPNAVNHVNS
101: TSFRDPTTAW LGRNGRWRMI TGSQEGRRGL ALLYTSRDFI SWKQSAKPLH YNDGSGMWEC PDFFPVGTTT SHGVDTSSFS VSVKHVLKVS LSDTSHDYYT
201: IGTYDQVKDQ YVPDDGFVQD VTAPRYDYGK FYASKTFYDS VNRRRILWGW VNESSPEKDN IKKGWAGLQA IPRKIWLDES GKRLMQWPVK EIERLRTTQV
301: KWESKVLKGG GSLVNVHGVT ASQADVEVLF KVSGLEKADV IEPGWTDPQL ICSQKNASSV NSGLGPFGLM VLASKNLEEY TSVYLRIFKA SQKSKDHVVV
401: MCSDQSRSSL DKENDKTSYG AFLDVSPYQP ISLRTLIDNS IVESFGGRGK TCITSRVYPK IAIGENTHLF VFNNGSQNVN VLSLSAWSMK SSL

Best Arabidopsis Sequence Match ( AT3G13784.3 )
(BLAST)

001: MLQDPNGPMI YKGIYHLFYQ WNQNGAVMDV NKTVWGHATS TDLINWITLS PAIRPSRPSD INGCWSGSVT ILPNGKPVIL YTGNDRYNRQ VQNLVKPKNL
101: TDPYLRHWTK SPENPLVTPS PVNHINSSAF RDPTTAWFGR DGRWRITTGS QEGRRGLAIL HTSKDFVIWK QSPKPLHYHD GTGMWECPDF FPVARTDSRG
201: LDTSFSSGPM VKHVLKVSLT DTFNDYYTIG TYDEVRDVYV PDKGFVQDET APRYDYGKFY ASKTFYDSVN QRRILWGWVN ESSPEKDNIK KGWAGLQAIP
301: RKVWLDESGK RLVQWPVKEI ERLRTTQVKW GNKLLKGGSV MEVHGVTAPQ ADVEVFFKVS GFDLEKADVI EPGWTDPQLI CSQRNASSGL GPFGLMVLAS
401: KNMEEYTSVN IRIFRAGENS KEHVVVMCSD QSTSSLEKGN DKTTYGAFLD ISPYQPISLR TLIDKSIVES FGGKGKTCIT SRVYPKLAIG ERTHLFAFNK
501: GSQNVNVLSL SAWSMKSSL

Arabidopsis Description

CWINV5Beta-fructofuranosidase, insoluble isoenzyme CWINV5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB9]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.