Factsheet for Bra006129.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 2
plastid 1
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78455	Canola	cytosol	84.5	68.42
Bra008926.1-P	Field mustard	mitochondrion, vacuole	42.12	65.44
KRH05441	Soybean	cytosol	32.88	47.64
KRH05439	Soybean	cytosol	32.88	46.8
KRH15569	Soybean	vacuole	33.0	45.83
VIT_04s0008g01150.t01	Wine grape	vacuole	31.0	43.43
Bra027398.1-P	Field mustard	cytosol	25.38	41.18
Bra021508.1-P	Field mustard	vacuole	29.62	40.93
Bra027397.1-P	Field mustard	vacuole	29.62	40.86
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	31.0	40.86
KRH15559	Soybean	cytosol	18.0	40.79
Bra037980.1-P	Field mustard	vacuole	29.25	40.7
Bra033419.1-P	Field mustard	vacuole	26.75	36.15
Bra023053.1-P	Field mustard	vacuole	25.88	35.26
Bra017257.1-P	Field mustard	cytosol	17.12	32.78
Bra027030.1-P	Field mustard	vacuole	24.25	29.66
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	24.38	29.46
Bra036653.1-P	Field mustard	vacuole	24.0	29.31
KRH15564	Soybean	mitochondrion	7.75	28.05
Bra026984.1-P	Field mustard	vacuole	24.12	27.97
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	20.5	27.42
Bra006130.1-P	Field mustard	cytosol	2.75	8.98

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EnsemblPlantsGene:Bra006129	EnsemblPlants:Bra006129.1	EnsemblPlants:Bra006129.1-P
InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M4CPJ1	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953
PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI000253F970	SEG:seg

Description

AT5G11920 (E=6e-227) AtcwINV6 | AtcwINV6 (6-&1-fructan exohydrolase); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase

Coordinates

chrA03:+:2133594..2139231

Molecular Weight (calculated)

90372.6 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.340

Length

800 amino acids

Sequence
(BLAST)

001: MAEDGNVQNL PVLFRTSFHF QPQRNWLNAP MYYKGFYHLF YQHNPLAPEF SRRIIWGHSV SQDMVNWIQL PPALSPSESY DINSCWSGSA TILPDGKPVI
101: LYTGIDNQER REDRRQVTVL AVPKDDSDPL LREWVKPTQN PVMVPPEDIL HYCFRDPTTA WQGQDGKWRV LIGAKERDTL RGVALLYHST DDCEQWTRYQ
201: EPLLVAQANE MLECVDFFPV KLMGKEGVDT SVNNASVRHV LKVSFEEELG GKDCYVIGSY CSETDRFVPD SELTYTRADL RYDDGWFYAS KSFFDSAKNR
301: RINWGWVVET DSREDDIEKG WAGLLGLPRQ MWLDTSGKRL MQWPIQEINN LRTRQVSFHN RELEGRSMFE ITGITAAQAD VEVTFDLPVL EDNSRIRDAT
401: HVADAVLFNS GNSLGCVYGP FGLLALASND LSEQTAIFFK IIRRGNGYSV IMGSDENRSS LRENVQKIPH GTFLDIDPRH EKISLRCLID HSIIESYGAG
501: GRNVITSRVY PKLAIGEAAK LYAFNNGTKA TFDGISSLSI ASSSLEMVSG VAGPLYYKGF YHLFYQHNPL NPFFGDIMVW GHSVSQDLVN WIKLEPALSP
601: SVPSDINSFW SGSTTILPDG KPIILYTGND ANKHQVTVLA EPKDPSDPLL REWVKPEGNP VMVPLPPSNV PVHCFRDPTT AWQEHDVSMP LLESQVTGMW
701: ECVDFFPVSV TGKEGFDNSV NDSSVRHVLK TSYGGNDCYV IGTYSSETET FSADSEFNTA ADLRYDYEIY LRPRLSSIVL RIGGSHGDGL WREIAMKMIL

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.