Factsheet for VIT_04s0008g01150.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
vacuole 7
extracellular 5
endoplasmic reticulum 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	80.56	75.78
VIT_06s0004g08000.t01	Wine grape	vacuole	22.77	68.06
VIT_09s0002g02320.t01	Wine grape	vacuole	60.6	60.49
VIT_08s0007g03060.t01	Wine grape	vacuole	52.36	52.55
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	18.74	52.45
Bra008926.1-P	Field mustard	mitochondrion, vacuole	46.76	51.84
CDX97155	Canola	peroxisome, plastid, vacuole	49.04	51.38
AT5G11920.1	Thale cress	cytosol	49.21	51.09
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	48.51	50.92
VIT_16s0022g00670.t01	Wine grape	cytosol	43.78	46.55
CDX70432	Canola	cytosol	24.34	45.87
CDX70431	Canola	cytosol	14.19	45.51
VIT_02s0154g00090.t01	Wine grape	vacuole	40.98	44.66
Bra006129.1-P	Field mustard	cytosol, nucleus, vacuole	43.43	31.0
CDX78455	Canola	cytosol	49.91	28.85
Bra006130.1-P	Field mustard	cytosol	8.06	18.78
CDX70433	Canola	cytosol	9.63	10.07

Protein Annotations

EntrezGene:100262911	wikigene:100262911	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	ProteinID:CCB46563
ProteinID:CCB46563.1	InterPro:ConA-like_dom_sf	UniProt:F6H3N0	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	EntrezGene:LOC100262911
wikigene:LOC100262911	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF32	SMART:SM00640
SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM	UniParc:UPI0001982E93	ArrayExpress:VIT_04s0008g01150	EnsemblPlantsGene:VIT_04s0008g01150
EnsemblPlants:VIT_04s0008g01150.t01	unigene:Vvi.17772	RefSeq:XP_002278880	RefSeq:XP_002278880.2	:	:

Description

No Description!

Coordinates

chr4:-:945473..948330

Molecular Weight (calculated)

64750.2 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.403

Length

571 amino acids

Sequence
(BLAST)

001: MEISAIWAVG LCLFLARHGI EAEASYPSCR NLQSNPTEQP YRTAYHFQPP KNWMNGPMYY NGVYHLFYQY NPYAAVWGNI TWAHSISYDL VNWVHLDHAL
101: NPTDPFDING CWTGSATILP GEEPVIIYTG ADTQNRQVQN MAVPKNISDP LLREWIKSPR NPLMSPTNGI DANNFRDPTT AWQGPDKVWR IIVGSLINDH
201: GTALLYRSRD FVNWTKSQTP LHSSNKTGMW ECPDFYPVST RTGVETSVQN ADTQHVLKAS FNGNDYYIIG KYVPETDTYL VETDFLDAGS DLRYDYGEFY
301: ASKTFFDAAK KRRILWAWIQ ESDSSSADIE KGWSGLQSIP RSVLLDQTGR QLVQWPIKEI EELRENQVTL LNKEVRGGSV LEVPGITASQ VDVEVSFDFP
401: HFKEAEVLDP SWVDPQLLCT QKNASVKGSI GPFGLLVLAS KDLTEQTAIF FHIFKTHNKK YVVLMCSDQS RSSVRQDVDK TSYGAFVDID PLREKISLRG
501: LIDHSIVESF GGEGRSCITA RVYPELAINK EAHLYVFNNG TQSVKISRLD AWSMKKAEIV PTNRRRNSHF N

Best Arabidopsis Sequence Match ( AT3G13790.2 )
(BLAST)

001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNGPMIY KGIYHLFYQW NPKGAVWGNI VWAHSTSTDL
101: INWDPHPPAI FPSAPFDING CWSGSATILP NGKPVILYTG IDPKNQQVQN IAEPKNLSDP YLREWKKSPL NPLMAPDAVN GINASSFRDP TTAWLGQDKK
201: WRVIIGSKIH RRGLAITYTS KDFLKWEKSP EPLHYDDGSG MWECPDFFPV TRFGSNGVET SSFGEPNEIL KHVLKISLDD TKHDYYTIGT YDRVKDKFVP
301: DNGFKMDGTA PRYDYGKYYA SKTFFDSAKN RRILWGWTNE SSSVEDDVEK GWSGIQTIPR KIWLDRSGKQ LIQWPVREVE RLRTKQVKNL RNKVLKSGSR
401: LEVYGVTAAQ ADVEVLFKVR DLEKADVIEP SWTDPQLICS KMNVSVKSGL GPFGLMVLAS KNLEEYTSVY FRIFKARQNS NKYVVLMCSD QSRSSLKEDN
501: DKTTYGAFVD INPHQPLSLR ALIDHSVVES FGGKGRACIT SRVYPKLAIG KSSHLFAFNY GYQSVDVLNL NAWSMNSAQI S

Arabidopsis Description

CWINV1Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Source:UniProtKB/Swiss-Prot;Acc:Q43866]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.