Factsheet for Bra008926.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

plastid 2
vacuole 3
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	100.0	94.67
AT5G11920.1	Thale cress	cytosol	77.86	72.91
KRH05441	Soybean	cytosol	53.4	49.82
KRH05439	Soybean	cytosol	53.01	48.58
KRH15569	Soybean	vacuole	54.17	48.44
VIT_04s0008g01150.t01	Wine grape	vacuole	51.84	46.76
Bra027398.1-P	Field mustard	cytosol	44.47	46.45
KRH15559	Soybean	cytosol	31.46	45.89
Bra021508.1-P	Field mustard	vacuole	49.32	43.87
Bra017257.1-P	Field mustard	cytosol	35.53	43.78
Bra037980.1-P	Field mustard	vacuole	48.54	43.48
Bra027397.1-P	Field mustard	vacuole	48.54	43.1
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	50.68	43.0
Bra006129.1-P	Field mustard	cytosol, nucleus, vacuole	65.44	42.12
KRH15564	Soybean	mitochondrion	17.48	40.72
Bra023053.1-P	Field mustard	vacuole	45.83	40.2
Bra033419.1-P	Field mustard	vacuole	45.24	39.36
Bra036653.1-P	Field mustard	vacuole	38.64	30.38
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	39.03	30.36
Bra027030.1-P	Field mustard	vacuole	38.45	30.28
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	34.56	29.77
Bra026984.1-P	Field mustard	vacuole	38.84	28.99
Bra006130.1-P	Field mustard	cytosol	12.04	25.31

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EnsemblPlantsGene:Bra008926	EnsemblPlants:Bra008926.1	EnsemblPlants:Bra008926.1-P
InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M4CXH9	PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953
PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI0002543F11	SEG:seg

Description

AT5G11920 (E=3e-238) AtcwINV6 | AtcwINV6 (6-&1-fructan exohydrolase); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase

Coordinates

chrA10:-:14448927..14450810

Molecular Weight (calculated)

57801.0 Da

IEP (calculated)

4.743

GRAVY (calculated)

-0.304

Length

515 amino acids

Sequence
(BLAST)

001: MYYKGFYHMF YQHNNLAPRF SEIMIWGHSV SQDMVNWIQL EPAFVPTESF DRHSCWSGSA TILPDGKPVI LYTGLEEHEE LDRRQVTVLA EPKDASDPLL
101: REWVKPKNNP VMLPPHDVPH DCFRDPTTGW QGQDGIWRVI VGAKEINTER GMAVLYRSKD FVEWTKYPTP LLATQDTGMW ECPDFFPVSL TGKEGVETSV
201: NNASVKHVLK VSFGGHDCYV IGTYSSESED FAADSEFTNT TADLRYDHGT FYASKAFFDS VKNRRINWGW VIETDSVEDD LEKGWSGLLS LPREMWLDTS
301: GKRLIQWPIE EINYLRTKQV SLDNTHLAGC SILEISGITA AQADVEVTFD LPVLEGNPQV LDSDHVDDAV LFDRDSSVGC VYGPFGLLAL ATSDLSEQTA
401: IFFKIIRRGN GYSVVMGSDE NKSSLRDNAR KSAHGTVLDI DPLHEKISLR CLIDHSIIES YGAGGRNVIT SRVYPKVAIG EAAKLYLFND GTRGVNISSM
501: EAWSMRNAEV NLNAL

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.