CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, vacuole

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008926.1-P	Field mustard	mitochondrion, vacuole	94.67	100.0
CDX97155	Canola	peroxisome, plastid, vacuole	95.77	95.6
AT5G11920.1	Thale cress	cytosol	77.57	76.73
CDX70432	Canola	cytosol	39.15	70.3
CDX70431	Canola	cytosol	20.4	62.36
KRH05441	Soybean	cytosol	52.94	52.17
KRH05439	Soybean	cytosol	52.94	51.25
KRH15569	Soybean	vacuole	54.04	51.04
VIT_04s0008g01150.t01	Wine grape	vacuole	50.92	48.51
KRH15559	Soybean	cytosol	30.33	46.74
CDY51739	Canola	vacuole	49.45	45.98
CDY37487	Canola	vacuole	49.26	45.89
CDY33067	Canola	vacuole	48.71	45.77
CDY24053	Canola	vacuole	48.16	45.25
CDX97519	Canola	vacuole	48.53	45.21
CDY23643	Canola	vacuole	43.75	44.91
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	50.0	44.81
CDX97518	Canola	endoplasmic reticulum, vacuole	46.51	44.23
CDX95352	Canola	vacuole	36.76	43.76
CDY23644	Canola	vacuole	47.98	43.14
CDY43744	Canola	vacuole	46.51	42.74
CDX79661	Canola	vacuole	46.32	42.71
CDX84575	Canola	vacuole	46.14	42.54
CDY23227	Canola	vacuole	45.96	42.23
KRH15564	Soybean	mitochondrion	16.73	41.18
CDX78455	Canola	cytosol	72.79	40.08
CDY39804	Canola	vacuole	38.42	33.12
CDY30056	Canola	vacuole	40.07	33.08
CDX98080	Canola	cytosol, peroxisome, vacuole	39.89	32.78
CDY03265	Canola	vacuole	37.87	32.65
CDY26548	Canola	vacuole	39.52	32.43
CDY46906	Canola	vacuole	38.97	32.42
CDY31826	Canola	vacuole	38.79	32.26
CDY03264	Canola	cytosol, golgi, vacuole	35.85	32.18
CDY39805	Canola	cytosol, golgi, plastid, vacuole	35.48	31.85
CDY15984	Canola	vacuole	38.97	31.18
CDX70433	Canola	cytosol	12.32	12.27

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078C0Q9
EnsemblPlants:CDX69719	ProteinID:CDX69719	ProteinID:CDX69719.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00135752001
InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296
PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF14	SMART:SM00640
SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI0004EE49AE	SEG:seg	:	:

Description

BnaA10g20680D

Coordinates

chrLK031790:-:1519958..1522498

Molecular Weight (calculated)

61111.8 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.349

Length

544 amino acids

Sequence
(BLAST)

001: MAQHGNGALN RTSFHFQPHR NWINDPNAPM YYKGFYHMFY QHNNLAPRFS EIMIWGHSVS QDMVNWIQLE PAFVPTESFD RHSCWSGSAT ILPDGKPVIL
101: YTGLEEHEEL DRRQVTVLAE PKDASDPLLR EWVKPKNNPV MLPPHDVPHD CFRDPTTGWQ GQDGIWRVIV GAKEINTERG MAVLYRSKDF VEWTKYPTPL
201: LATQDTGMWE CPDFFPVSLT GKEGVETSVN NASVKHVLKV SFGGHDCYVI GTYSSESEDF AADSEFTNTT ADLRYDHGTF YASKAFFDSV KNRRINWGWV
301: IETDSVEDDL EKGWSGLLSL PREMWLDTSG KRLIQWPIEE INYLRTKQVS LDNTHLAGCS ILEISGITAA QADVEVTFDL PVLEGNPQVL DSDHVDDAVL
401: FDRDSSVGCV YGPFGLLALA TSDLSEQTAI FFKIIRRGNG YSVVMGSDEN KSSLRDNARK SAHGTVLDID PLHEKISLRC LIDHSIIESY GAGGRNVITS
501: RVYPKVAIGE AAKLYLFNDG TRGVNISSME AWSMRNAEVN LNAL

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.