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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78905
CDX98596
CDX99411
CDY01565

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12240.1 CDX78905 AT4G19030.1 21798944
AT1G12240.1 CDX98596 AT4G19030.1 21798944
AT1G12240.1 CDX99411 AT4G19030.1 21798944
AT1G12240.1 CDY01565 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026984.1-P Field mustard vacuole 99.85 95.94
CDY15984 Canola vacuole 95.93 93.53
CDX98080 Canola cytosol, peroxisome, vacuole 90.8 90.94
CDY30056 Canola vacuole 90.2 90.74
AT1G12240.1 Thale cress vacuole 89.14 89.01
CDY46906 Canola vacuole 78.88 79.97
CDY31826 Canola vacuole 78.13 79.2
CDY03265 Canola vacuole 75.26 79.08
CDY39804 Canola vacuole 75.11 78.92
CDY39805 Canola cytosol, golgi, plastid, vacuole 70.14 76.73
CDY03264 Canola cytosol, golgi, vacuole 69.98 76.57
VIT_02s0154g00090.t01 Wine grape vacuole 55.35 70.04
KRH57351 Soybean endoplasmic reticulum 62.75 64.5
KRH04082 Soybean endoplasmic reticulum 61.84 63.57
GSMUA_Achr11P... Banana mitochondrion, vacuole 49.47 61.77
GSMUA_Achr1P11470_001 Banana peroxisome, plastid, vacuole 51.13 61.19
KRH77397 Soybean endoplasmic reticulum 62.29 61.19
KRH28036 Soybean vacuole 56.86 60.9
GSMUA_Achr5P19880_001 Banana mitochondrion, vacuole 51.43 60.68
PGSC0003DMT400012217 Potato cytosol, peroxisome, plastid, vacuole 58.37 59.26
Solyc08g079080.2.1 Tomato unclear 57.92 58.9
HORVU2Hr1G091990.6 Barley cytosol 21.72 58.78
Os04t0535600-01 Rice extracellular, mitochondrion, plasma membrane 56.86 57.47
TraesCS2A01G386100.2 Wheat plastid, vacuole 55.2 55.79
TraesCS2B01G403000.1 Wheat vacuole 55.35 55.69
TraesCS2D01G382600.2 Wheat vacuole 55.2 55.2
Zm00001d002830_P001 Maize extracellular 54.75 54.42
Zm00001d025943_P001 Maize vacuole 54.6 54.11
Zm00001d054075_P001 Maize plastid, vacuole 43.74 52.92
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 53.24 52.37
Zm00001d014947_P001 Maize plasma membrane 52.94 52.15
Os02t0106100-01 Rice plasma membrane 51.73 51.81
TraesCS7D01G010000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 51.13 51.52
TraesCS7A01G010200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 50.98 51.45
TraesCS4A01G484800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 50.98 51.37
TraesCS4A01G485500.1 Wheat mitochondrion 39.06 50.88
TraesCS7D01G009300.1 Wheat mitochondrion 39.06 50.88
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 50.38 50.61
TraesCS6D01G026600.2 Wheat endoplasmic reticulum, peroxisome, vacuole 50.23 49.63
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 48.87 49.09
TraesCS6A01G023300.2 Wheat peroxisome, plastid, vacuole 49.77 49.03
TraesCS6B01G031700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 49.77 49.03
TraesCS6A01G023100.1 Wheat vacuole 49.77 48.96
TraesCS6D01G026300.2 Wheat peroxisome, plastid, vacuole 49.77 48.82
TraesCS6B01G031300.1 Wheat peroxisome, plastid, vacuole 49.47 48.74
TraesCS6D01G026500.2 Wheat peroxisome, plastid, vacuole 49.62 48.53
TraesCS6B01G031500.1 Wheat extracellular, peroxisome, vacuole 49.47 48.52
OQU82023 Sorghum plastid 51.43 48.44
TraesCS6A01G023200.1 Wheat peroxisome, plastid, vacuole 48.87 48.36
TraesCS6B01G031600.1 Wheat peroxisome, plastid, vacuole 48.57 48.28
TraesCS6D01G026400.1 Wheat peroxisome, plastid, vacuole 48.72 48.07
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 49.17 48.01
TraesCS7A01G009700.1 Wheat mitochondrion, plastid 43.44 47.29
TraesCS4A01G485000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 43.29 46.82
TraesCS4A01G485800.1 Wheat vacuole 45.55 46.6
HORVU7Hr1G000270.1 Barley mitochondrion 44.65 46.32
TraesCS7D01G008900.1 Wheat vacuole 45.25 46.3
TraesCS7A01G009400.1 Wheat vacuole 45.1 46.07
TraesCS4A01G485400.2 Wheat golgi 42.68 45.94
HORVU0Hr1G018850.4 Barley vacuole 42.53 45.93
TraesCS7A01G009200.2 Wheat vacuole 44.8 45.83
TraesCS4A01G486000.1 Wheat golgi 45.85 45.78
TraesCS4A01G485900.1 Wheat cytosol, peroxisome, vacuole 44.65 45.68
TraesCS7A01G009800.2 Wheat golgi, unclear 42.68 45.65
TraesCS7D01G008700.1 Wheat vacuole 45.55 45.62
TraesCS7D01G009400.2 Wheat cytosol, plastid, vacuole 42.68 45.57
TraesCS7A01G009100.1 Wheat endoplasmic reticulum, peroxisome, vacuole 45.4 45.54
TraesCS7D01G008800.2 Wheat cytosol, plastid, vacuole 44.19 45.5
TraesCS7A01G060400.1 Wheat cytosol, peroxisome, plastid, vacuole 44.04 45.41
TraesCS7D01G055000.1 Wheat plastid 44.04 45.41
TraesCS4A01G485600.1 Wheat mitochondrion, vacuole 44.19 45.08
TraesCS7A01G009600.3 Wheat mitochondrion 44.04 44.79
HORVU7Hr1G000250.3 Barley vacuole 43.89 44.29
TraesCS7D01G009700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 42.53 43.86
CDX95352 Canola vacuole 30.17 43.76
HORVU7Hr1G001040.6 Barley plastid 43.89 43.63
TraesCS7A01G009500.3 Wheat plastid 42.23 43.28
TraesCS4A01G485700.1 Wheat cytosol, mitochondrion, peroxisome, plastid, vacuole 42.53 42.28
CDY51739 Canola vacuole 37.25 42.22
CDY37487 Canola vacuole 37.1 42.12
CDY23227 Canola vacuole 37.56 42.06
TraesCS7D01G009100.1 Wheat cytosol, mitochondrion, peroxisome, vacuole 42.38 42.0
HORVU7Hr1G000260.1 Barley plastid 45.85 41.99
TraesCS7D01G054800.3 Wheat mitochondrion, vacuole 44.04 41.65
TraesCS7A01G060300.2 Wheat mitochondrion 43.59 41.17
CDX97519 Canola vacuole 36.2 41.1
CDY43744 Canola vacuole 36.2 40.54
CDX97518 Canola endoplasmic reticulum, vacuole 34.69 40.21
CDX79661 Canola vacuole 35.75 40.17
CDY33067 Canola vacuole 34.99 40.07
CDY24053 Canola vacuole 34.84 39.9
CDX84575 Canola vacuole 35.44 39.83
CDY23643 Canola vacuole 31.82 39.81
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 15.54 39.77
CDX97155 Canola peroxisome, plastid, vacuole 32.58 39.63
CDX69719 Canola mitochondrion, peroxisome, plastid, vacuole 32.43 39.52
TraesCS7D01G009200.2 Wheat cytosol, mitochondrion, plasma membrane, plastid, vacuole 44.34 38.89
CDX70431 Canola cytosol 10.41 38.76
CDY23644 Canola vacuole 35.29 38.68
CDX70432 Canola cytosol 15.69 34.32
CDX78455 Canola cytosol 33.18 22.27
CDX70433 Canola cytosol 6.49 7.88
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2GO:A0A078GPK0
UniProt:A0A078GPK0InterPro:Beta-fructofuranosidaseEnsemblPlants:CDY26548ProteinID:CDY26548ProteinID:CDY26548.1InterPro:ConA-like_dom_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004564GO:GO:0004575GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00035410001InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_N
InterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296PFAM:PF00251PFAM:PF08244PFAM:PF11837ScanProsite:PS00609
PANTHER:PTHR31953PANTHER:PTHR31953:SF31SMART:SM00640SUPFAM:SSF49899SUPFAM:SSF75005TMHMM:TMhelix
UniParc:UPI0004EE2BDF:::::
Description
BnaA09g47290DBnaA09g47290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPK0]
Coordinates
chrLK032192:+:86367..90715
Molecular Weight (calculated)
73758.8 Da
IEP (calculated)
6.172
GRAVY (calculated)
-0.282
Length
663 amino acids
Sequence
(BLAST)
001: MASSDALLPI SAREEDPLVS DGSRSDPNAE THRRKRPVKG LLAVSFGLLF IAFYVVLIAT HHGSSRSNDV KIESDETATT TSRARLAGVS EKSNDQLWKL
101: SGERNTVSFA WNNSVLSWQR TAFHFQPEQN WMNDPNGPLF YKGWYHFFYQ YNPNAAVWGD IVWGHAVSKD LIHWVHLPIA MVADQWYDAN GVWTGSATFL
201: DDGSLVMLYT GSTDKSVQVQ NLAYPEDLND PLLLKWVKYS GNPVLVPPPG ILPKDFRDPT TAWKTSDGKW RITIGSKINK TGISLVYDTI DFKTYEKHDT
301: LLHKVPNTGM WECVDFYPVS KTAINGLDTS VNGPNVKHIV KASMDDTRFD HYAVGTYFDS NGTWIPDDPT IDVGMSASLR YDYGKFYASK TFYDQNKGRR
401: ILWSWIGESD SEAADVQKGW SSLQGIPRTV VLDTKTGKNL VQWPVEEIKS LRLSSKQFDM EVGPGSVVPV DVNTATQLDI EAEFEIKKET LDKILGDSSV
501: VAEAEEFSCQ KSGGSTVRGA LGPFGFSVLA DKSLSEQTPV YFYVAKGKDS KLKAFFCTDT SRSTFANDVV KPIYGSSVPV LEGEKLTMRI LVDHSIVEGF
601: AQGGRTCITS RVYPTKAIYG AAKLFVFNNA IDATVTASFK VWQMNSAFIH PYFEEAVRAL SST
Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)
001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT
Arabidopsis Description
BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.