Factsheet for PGSC0003DMT400012217

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, cytosol

Predictor Summary:

plastid 2
vacuole 4
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400071510
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12240.1	PGSC0003DMT400071510	AT4G19030.1	21798944
AT1G12240.1	PGSC0003DMT400073246	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079080.2.1	Tomato	unclear	94.64	94.79
VIT_02s0154g00090.t01	Wine grape	vacuole	54.67	68.13
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	51.76	63.65
HORVU2Hr1G091990.6	Barley	cytosol	23.74	63.27
KRH57351	Soybean	endoplasmic reticulum	61.26	62.02
KRH04082	Soybean	endoplasmic reticulum	61.1	61.86
GSMUA_Achr5P19880_001	Banana	mitochondrion, vacuole	52.68	61.21
KRH77397	Soybean	endoplasmic reticulum	62.48	60.44
KRH28036	Soybean	vacuole	57.12	60.26
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	50.38	59.39
CDY39804	Canola	vacuole	56.97	58.95
AT1G62660.1	Thale cress	vacuole	58.5	58.95
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	58.96	58.69
CDY03265	Canola	vacuole	56.66	58.64
CDY26548	Canola	vacuole	59.26	58.37
CDY30056	Canola	vacuole	58.81	58.27
PGSC0003DMT400035987	Potato	cytosol, extracellular	56.97	58.22
AT1G12240.1	Thale cress	vacuole	58.81	57.83
CDX98080	Canola	cytosol, peroxisome, vacuole	58.5	57.7
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	58.35	57.55
CDY46906	Canola	vacuole	57.58	57.49
Bra036653.1-P	Field mustard	vacuole	57.58	57.4
TraesCS2B01G403000.1	Wheat	vacuole	57.89	57.36
Bra027030.1-P	Field mustard	vacuole	57.43	57.34
CDY31826	Canola	vacuole	57.27	57.19
CDY15984	Canola	vacuole	59.26	56.91
TraesCS2D01G382600.2	Wheat	vacuole	57.73	56.86
TraesCS2A01G386100.2	Wheat	plastid, vacuole	57.12	56.86
Bra026984.1-P	Field mustard	vacuole	59.26	56.09
CDY03264	Canola	cytosol, golgi, vacuole	51.61	55.61
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	50.69	55.35
CDY39805	Canola	cytosol, golgi, plastid, vacuole	51.0	54.95
Zm00001d002830_P001	Maize	extracellular	54.98	53.82
Zm00001d014947_P001	Maize	plasma membrane	55.44	53.79
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	55.13	53.41
Zm00001d025943_P001	Maize	vacuole	54.67	53.36
Zm00001d054075_P001	Maize	plastid, vacuole	44.41	52.92
HORVU6Hr1G004000.2	Barley	endoplasmic reticulum, peroxisome, vacuole	53.29	52.73
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.83	52.51
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.83	52.43
Os02t0106100-01	Rice	plasma membrane	53.14	52.42
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.53	52.13
TraesCS6A01G023100.1	Wheat	vacuole	53.75	52.08
TraesCS7D01G009300.1	Wheat	mitochondrion	40.43	51.87
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	53.6	51.78
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	53.14	51.71
TraesCS4A01G485500.1	Wheat	mitochondrion	40.28	51.67
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	52.68	51.57
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	52.07	51.52
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	52.83	51.49
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	52.83	51.34
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	52.99	51.18
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	52.53	50.97
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	52.53	50.97
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	52.68	50.74
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	52.22	50.67
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	52.53	50.52
TraesCS4A01G485400.2	Wheat	golgi	45.64	48.38
HORVU7Hr1G000270.1	Barley	mitochondrion	47.32	48.36
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	48.85	48.26
TraesCS4A01G485800.1	Wheat	vacuole	47.78	48.15
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	44.87	48.11
TraesCS7A01G009400.1	Wheat	vacuole	47.63	47.92
TraesCS7D01G008700.1	Wheat	vacuole	48.55	47.89
HORVU0Hr1G018850.4	Barley	vacuole	45.02	47.88
TraesCS7D01G055000.1	Wheat	plastid	47.01	47.74
TraesCS4A01G486000.1	Wheat	golgi	48.55	47.74
TraesCS7D01G008900.1	Wheat	vacuole	47.32	47.69
OQU82023	Sorghum	plastid	51.3	47.59
TraesCS7A01G009800.2	Wheat	golgi, unclear	45.18	47.58
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	45.18	47.5
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	44.56	47.47
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	46.71	47.43
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	46.55	47.2
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	46.55	46.77
TraesCS7A01G009200.2	Wheat	vacuole	46.25	46.6
TraesCS7A01G009600.3	Wheat	mitochondrion	46.4	46.47
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	46.09	46.45
HORVU7Hr1G000250.3	Barley	vacuole	46.4	46.12
TraesCS7A01G009500.3	Wheat	plastid	44.87	45.29
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	44.41	45.1
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	34.61	44.58
HORVU7Hr1G001040.6	Barley	plastid	45.48	44.53
HORVU7Hr1G000260.1	Barley	plastid	49.16	44.34
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	34.76	44.25
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	45.02	44.08
PGSC0003DMT400072608	Potato	extracellular	39.2	43.99
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	44.56	43.5
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	46.55	43.37
TraesCS7A01G060300.2	Wheat	mitochondrion	46.09	42.88
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	33.54	42.77
PGSC0003DMT400093309	Potato	cytosol	5.36	42.68
PGSC0003DMT400021619	Potato	cytosol	33.08	42.19
PGSC0003DMT400028670	Potato	golgi, vacuole	37.06	42.09
PGSC0003DMT400072606	Potato	cytosol	33.54	40.86
PGSC0003DMT400006639	Potato	vacuole	35.68	40.81
PGSC0003DMT400097344	Potato	cytosol	9.65	40.65
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	15.93	40.15
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	46.4	40.08
PGSC0003DMT400071784	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	15.01	37.98

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	EntrezGene:102581558	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2
InterPro:Beta-fructofuranosidase	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564
GO:GO:0004575	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M1A0X1	PFAM:PF00251	PFAM:PF08244
PFAM:PF11837	EnsemblPlantsGene:PGSC0003DMG400004790	PGSC:PGSC0003DMG400004790	EnsemblPlants:PGSC0003DMT400012217	ScanProsite:PS00609	PANTHER:PTHR31953
PANTHER:PTHR31953:SF31	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix	UniParc:UPI000296B69B
RefSeq:XP_006355490.1	:	:	:	:	:

Description

Invertase [Source:PGSC_GENE;Acc:PGSC0003DMG400004790]

Coordinates

chr8:+:52701626..52705705

Molecular Weight (calculated)

72753.2 Da

IEP (calculated)

6.610

GRAVY (calculated)

-0.329

Length

653 amino acids

Sequence
(BLAST)

001: MSIPNSESNN GVPYTQLPES DNDSGNTPAS SCRRPKKSTF MILTGLVAFL LFFVAVKYGN NDDSDDVNPG PVPPEQTVCN MLGSNLMPLT TMRTLARGVT
101: EGVSAKSRGH FLGARPFPWT QKMLAWQRTS FHFQPKKNWM NDPNGPLYYK GWYHLFYQYN PEAAVWGNIV WGHAVSKDLI HWQHLPVAMV ADQWYDINGV
201: WTGSATFLPN GDLIMLYTGS TNELVQVQNL AYPADPSDPL LKKWIKYEGN PVLIPPPGIG LKDFRDPTTA WTTPEGKWRI TIGSKINKTG ISLVYDTIDF
301: KKFELLKGAL HGVPGTGMWE CVDFYPVSKI VENGLDTSEN GPAVKHVLKS SLDDDRNDYY ALGTYDAGAG KWVPDNPIID VGIGLRYDYG NFYASKTFYD
401: QEKKRRVLWA WIKETDSEAA DICRGWASLQ SIPRTIKYDK KTGSNIITWP VAEVENLRSN NNEFNKVVVK PGSIVPLEVG SATQLDIMAE FEIDQNVLKK
501: VDGSNATYDC IKSGGSGERG ALGPFGLLVL TDNSLSEQTP IYFYIAKDLT GNFNTFFCND LTRSSEATDV RKLIYGSTVP VLQGEKLSLR TLVDHSIVES
601: FAQNGRTAIT SRVYPTKAIY ENAKIYLFNN ATDISVTATI KIWQMNSANI KSN

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.