Factsheet for TraesCS4A01G486000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	95.93	96.37
HORVU7Hr1G000260.1	Barley	plastid	96.23	88.26
TraesCS7A01G009200.2	Wheat	vacuole	81.93	83.95
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	81.33	83.33
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	78.31	80.87
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	68.52	69.25
TraesCS4A01G485500.1	Wheat	mitochondrion	52.86	68.96
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	67.62	68.24
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	60.09	65.52
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.64	64.6
TraesCS4A01G485400.2	Wheat	golgi	59.04	63.64
TraesCS7A01G009800.2	Wheat	golgi, unclear	58.89	63.06
TraesCS7A01G009600.3	Wheat	mitochondrion	60.99	62.12
TraesCS4A01G485800.1	Wheat	vacuole	60.54	62.04
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	62.5	61.94
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	60.24	61.54
TraesCS7A01G009500.3	Wheat	plastid	59.94	61.51
TraesCS6A01G023100.1	Wheat	vacuole	62.35	61.42
TraesCS7A01G009400.1	Wheat	vacuole	59.79	61.17
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	61.75	60.92
Zm00001d014947_P001	Maize	plasma membrane	61.75	60.92
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	61.75	60.83
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	60.09	59.82
Os02t0106100-01	Rice	plasma membrane	59.64	59.82
Zm00001d054075_P001	Maize	plastid, vacuole	47.59	57.66
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	48.04	57.58
TraesCS7A01G060300.2	Wheat	mitochondrion	59.64	56.41
VIT_02s0154g00090.t01	Wine grape	vacuole	43.83	55.53
VIT_16s0022g00670.t01	Wine grape	cytosol	42.92	53.07
TraesCS2A01G386100.2	Wheat	plastid, vacuole	49.55	50.15
PGSC0003DMT400035987	Potato	cytosol, extracellular	48.19	50.08
KRH04082	Soybean	endoplasmic reticulum	48.19	49.61
KRH57351	Soybean	endoplasmic reticulum	48.19	49.61
Solyc03g083910.2.1	Tomato	extracellular	47.89	49.07
CDY39804	Canola	vacuole	46.54	48.97
Solyc08g079080.2.1	Tomato	unclear	48.04	48.93
CDY03265	Canola	vacuole	46.23	48.65
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	47.74	48.55
KRH77397	Soybean	endoplasmic reticulum	48.95	48.15
KRH28036	Soybean	vacuole	44.88	48.14
AT1G62660.1	Thale cress	vacuole	46.84	47.99
CDY03264	Canola	cytosol, golgi, vacuole	43.37	47.52
Bra036653.1-P	Field mustard	vacuole	46.69	47.33
Bra036652.1-P	Field mustard	cytosol, golgi, plastid, vacuole	42.62	47.32
CDY31826	Canola	vacuole	46.54	47.25
CDY46906	Canola	vacuole	46.54	47.25
AT1G12240.1	Thale cress	vacuole	47.14	47.14
Bra027030.1-P	Field mustard	vacuole	46.39	47.09
CDY39805	Canola	cytosol, golgi, plastid, vacuole	42.92	47.03
CDY30056	Canola	vacuole	46.23	46.59
Bra019749.1-P	Field mustard	nucleus, peroxisome, vacuole	46.23	46.37
KRH23803	Soybean	vacuole	42.62	46.09
KRH39981	Soybean	vacuole	43.67	46.03
CDX98080	Canola	cytosol, peroxisome, vacuole	45.78	45.92
CDY26548	Canola	vacuole	45.78	45.85
KRH56348	Soybean	vacuole	43.83	45.05
CDY15984	Canola	vacuole	45.93	44.85
Bra026984.1-P	Field mustard	vacuole	45.78	44.06
TraesCS1A01G214700.1	Wheat	peroxisome, plastid, vacuole	27.56	38.28
TraesCS4A01G248700.1	Wheat	vacuole	32.83	37.52
TraesCS2A01G488500.2	Wheat	peroxisome	30.72	37.36
TraesCS2A01G489100.1	Wheat	cytosol, mitochondrion, nucleus, plastid	31.02	37.25
TraesCS4A01G321400.1	Wheat	cytosol, peroxisome, vacuole	26.66	37.03
TraesCS5A01G526200.1	Wheat	plastid	32.23	36.83
TraesCS2A01G588200.1	Wheat	vacuole	29.22	36.74
TraesCS2A01G488900.1	Wheat	vacuole	32.68	36.59
TraesCS4A01G321700.1	Wheat	vacuole	31.93	36.36
TraesCS3A01G516900.1	Wheat	unclear	31.17	35.75
TraesCS2A01G588300.1	Wheat	vacuole	31.78	35.7
TraesCS2A01G489000.1	Wheat	endoplasmic reticulum, vacuole	31.78	35.64
TraesCS4A01G321500.1	Wheat	vacuole	31.93	35.39
TraesCS1A01G394000.1	Wheat	vacuole	30.27	35.26
TraesCS6A01G060700.1	Wheat	unclear, vacuole	31.63	35.18
TraesCS2A01G588700.1	Wheat	vacuole	30.87	34.75
TraesCS6A01G069000.1	Wheat	vacuole	30.87	34.63
TraesCS6A01G060800.1	Wheat	vacuole	30.27	33.44
TraesCS2A01G590900.1	Wheat	vacuole	31.17	33.44
TraesCS2A01G588900.1	Wheat	cytosol	26.36	33.4
TraesCS3A01G029700.1	Wheat	cytosol	16.42	32.83
TraesCS2A01G295400.1	Wheat	unclear	32.53	32.68
TraesCS4A01G321600.1	Wheat	vacuole	29.07	29.38

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	InterPro:Beta-fructofuranosidase
InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564	GO:GO:0004575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	PFAM:PF11837
PANTHER:PTHR31953	PANTHER:PTHR31953:SF10	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4A01G486000	EnsemblPlants:TraesCS4A01G486000.1	TIGR:cd08996	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:739415410..739418727

Molecular Weight (calculated)

72710.8 Da

IEP (calculated)

5.033

GRAVY (calculated)

-0.277

Length

664 amino acids

Sequence
(BLAST)

001: MDSSRVILIP GTPPLPYAAY EQLPSSSADA KQGQEEQRAG GGLRWRACAA VLAASAVVAL VVAAAVFGAG GAGRDAVAAS VPATSATGFP RSRGKEHGVS
101: EKTSGAYSAN GGFPWSNAML QWQRTGYHFQ PDKYYQNDPN GPVYYGGWYH FFYQYNPSGS VWEPQIVWGH AVSKDLIHWR HLPPALVPDQ WYDIKGVLTG
201: SITVLPDGKV VLLYTGNTET FAQVTCLAEP ADPSDPLLRE WVKHPANPVV FPPPGIGMKD FRDPTTAWFD ESDGTWRTII GSKNDSDHSG IVFSYKTKDF
301: VSYELMPGYM YRGPKGTGEY ECIDLYAVGG GRKASDMYNS TAEDVLYVLK ESSDDDRHDW YSLGRFDAAA NKWTPIDTEL ELGVGLRYDW GKYYASKSFY
401: DPVKQRRVVW AYVGETDSER ADITKGWANL QSIPRTVELD EKTRTNLIQW PVEELDTLRI NTTDLSGFTV GAGSVVPLHL HQTAQLDIEA TFRIDASAIE
501: ALNEADVSYN CTTSSGAATR GALGPFGLLV LANRALTEQT GVYFYVSKGL DGGLRTHFCH DELRSSHASD VVKRVVGSTV PVLDGEDFSV RVLVDHSIVQ
601: SFAMGGRLTA TSRAYPTEAI YAAAGVYMFN NATGTSVTAE KLVVHDMDSS YNHIYTDDDL VVVN

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.