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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78905
CDX98596
CDX99411
CDY01565

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12240.1 CDX78905 AT4G19030.1 21798944
AT1G12240.1 CDX98596 AT4G19030.1 21798944
AT1G12240.1 CDX99411 AT4G19030.1 21798944
AT1G12240.1 CDY01565 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019749.1-P Field mustard nucleus, peroxisome, vacuole 99.09 99.09
CDY30056 Canola vacuole 96.83 97.27
CDY26548 Canola vacuole 90.94 90.8
CDY15984 Canola vacuole 90.79 88.38
AT1G12240.1 Thale cress vacuole 88.37 88.1
CDY46906 Canola vacuole 78.85 79.82
CDY31826 Canola vacuole 78.25 79.2
CDY03265 Canola vacuole 75.23 78.92
CDY39804 Canola vacuole 75.08 78.76
CDY03264 Canola cytosol, golgi, vacuole 71.0 77.56
CDY39805 Canola cytosol, golgi, plastid, vacuole 71.0 77.56
VIT_02s0154g00090.t01 Wine grape vacuole 55.59 70.23
KRH04082 Soybean endoplasmic reticulum 62.24 63.88
KRH57351 Soybean endoplasmic reticulum 62.08 63.72
GSMUA_Achr11P... Banana mitochondrion, vacuole 49.7 61.96
GSMUA_Achr1P11470_001 Banana peroxisome, plastid, vacuole 51.21 61.19
GSMUA_Achr5P19880_001 Banana mitochondrion, vacuole 51.66 60.85
KRH77397 Soybean endoplasmic reticulum 61.48 60.3
KRH28036 Soybean vacuole 55.89 59.77
HORVU2Hr1G091990.6 Barley cytosol 22.05 59.59
PGSC0003DMT400012217 Potato cytosol, peroxisome, plastid, vacuole 57.7 58.5
Solyc08g079080.2.1 Tomato unclear 56.95 57.82
Os04t0535600-01 Rice extracellular, mitochondrion, plasma membrane 57.25 57.77
TraesCS2B01G403000.1 Wheat vacuole 55.89 56.15
TraesCS2A01G386100.2 Wheat plastid, vacuole 55.44 55.95
TraesCS2D01G382600.2 Wheat vacuole 55.59 55.51
Zm00001d002830_P001 Maize extracellular 55.44 55.02
Zm00001d025943_P001 Maize vacuole 55.14 54.56
Zm00001d054075_P001 Maize plastid, vacuole 43.66 52.74
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 53.32 52.37
Zm00001d014947_P001 Maize plasma membrane 53.17 52.3
Os02t0106100-01 Rice plasma membrane 52.11 52.11
TraesCS7D01G010000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 51.36 51.67
TraesCS7A01G010200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 51.21 51.6
TraesCS4A01G484800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 51.21 51.52
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 50.76 50.91
TraesCS7D01G009300.1 Wheat mitochondrion 38.97 50.69
TraesCS4A01G485500.1 Wheat mitochondrion 38.82 50.49
TraesCS6D01G026600.2 Wheat endoplasmic reticulum, peroxisome, vacuole 50.6 49.93
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 49.7 49.85
TraesCS6A01G023300.2 Wheat peroxisome, plastid, vacuole 50.15 49.33
TraesCS6B01G031700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 50.15 49.33
OQU82023 Sorghum plastid 52.42 49.29
TraesCS6A01G023100.1 Wheat vacuole 50.15 49.26
TraesCS6B01G031300.1 Wheat peroxisome, plastid, vacuole 50.0 49.18
TraesCS6D01G026300.2 Wheat peroxisome, plastid, vacuole 50.15 49.11
TraesCS6D01G026500.2 Wheat peroxisome, plastid, vacuole 50.0 48.82
TraesCS6B01G031600.1 Wheat peroxisome, plastid, vacuole 49.09 48.73
TraesCS6B01G031500.1 Wheat extracellular, peroxisome, vacuole 49.7 48.67
TraesCS6A01G023200.1 Wheat peroxisome, plastid, vacuole 49.24 48.66
TraesCS6D01G026400.1 Wheat peroxisome, plastid, vacuole 49.09 48.36
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 49.55 48.31
TraesCS7A01G009700.1 Wheat mitochondrion, plastid 43.81 47.62
TraesCS4A01G485800.1 Wheat vacuole 46.07 47.07
HORVU7Hr1G000270.1 Barley mitochondrion 45.32 46.95
TraesCS4A01G485000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 43.35 46.82
TraesCS7D01G008900.1 Wheat vacuole 45.77 46.76
TraesCS7A01G009400.1 Wheat vacuole 45.47 46.38
TraesCS4A01G485900.1 Wheat cytosol, peroxisome, vacuole 45.32 46.3
HORVU0Hr1G018850.4 Barley vacuole 42.9 46.25
TraesCS7A01G009200.2 Wheat vacuole 45.17 46.14
TraesCS7A01G060400.1 Wheat cytosol, peroxisome, plastid, vacuole 44.71 46.03
TraesCS7D01G055000.1 Wheat plastid 44.71 46.03
TraesCS7D01G008800.2 Wheat cytosol, plastid, vacuole 44.71 45.96
TraesCS4A01G485400.2 Wheat golgi 42.75 45.94
TraesCS7D01G008700.1 Wheat vacuole 45.92 45.92
TraesCS7A01G009100.1 Wheat endoplasmic reticulum, peroxisome, vacuole 45.77 45.84
TraesCS4A01G486000.1 Wheat golgi 45.92 45.78
TraesCS4A01G485600.1 Wheat mitochondrion, vacuole 44.86 45.69
TraesCS7A01G009800.2 Wheat golgi, unclear 42.75 45.65
TraesCS7D01G009400.2 Wheat cytosol, plastid, vacuole 42.75 45.57
TraesCS7A01G009600.3 Wheat mitochondrion 44.41 45.09
HORVU7Hr1G000250.3 Barley vacuole 44.56 44.9
TraesCS7D01G009700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 42.75 44.01
TraesCS7A01G009500.3 Wheat plastid 42.6 43.59
CDX95352 Canola vacuole 30.06 43.54
HORVU7Hr1G001040.6 Barley plastid 43.66 43.33
CDY51739 Canola vacuole 38.22 43.25
CDY37487 Canola vacuole 38.07 43.15
TraesCS4A01G485700.1 Wheat cytosol, mitochondrion, peroxisome, plastid, vacuole 43.05 42.73
TraesCS7D01G009100.1 Wheat cytosol, mitochondrion, peroxisome, vacuole 42.9 42.45
HORVU7Hr1G000260.1 Barley plastid 46.07 42.13
CDX97519 Canola vacuole 37.16 42.12
TraesCS7D01G054800.3 Wheat mitochondrion, vacuole 44.56 42.08
TraesCS7A01G060300.2 Wheat mitochondrion 44.26 41.74
CDY23227 Canola vacuole 37.16 41.55
CDX97518 Canola endoplasmic reticulum, vacuole 35.5 41.08
CDY24053 Canola vacuole 35.5 40.59
CDY23643 Canola vacuole 32.48 40.57
CDY33067 Canola vacuole 35.35 40.41
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 15.71 40.15
CDX69719 Canola mitochondrion, peroxisome, plastid, vacuole 32.78 39.89
CDX97155 Canola peroxisome, plastid, vacuole 32.63 39.63
CDY23644 Canola vacuole 36.1 39.5
CDX79661 Canola vacuole 35.2 39.49
CDY43744 Canola vacuole 35.2 39.36
CDX84575 Canola vacuole 34.74 38.98
CDX70431 Canola cytosol 10.42 38.76
TraesCS7D01G009200.2 Wheat cytosol, mitochondrion, plasma membrane, plastid, vacuole 44.11 38.62
CDX70432 Canola cytosol 16.01 34.98
CDX78455 Canola cytosol 33.23 22.27
CDX70433 Canola cytosol 6.34 7.69
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2GO:A0A078E7L0
InterPro:Beta-fructofuranosidaseEnsemblPlants:CDX98080ProteinID:CDX98080ProteinID:CDX98080.1InterPro:ConA-like_dom_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004564GO:GO:0004575GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00105460001InterPro:Glyco_hydro_32InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_C
InterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296PFAM:PF00251PFAM:PF08244PFAM:PF11837
ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF31SMART:SM00640SUPFAM:SSF49899SUPFAM:SSF75005
TMHMM:TMhelixUniParc:UPI0004EEE5F7SEG:seg:::
Description
BnaA06g08310D
Coordinates
chrLK031902:-:890643..894895
Molecular Weight (calculated)
73428.5 Da
IEP (calculated)
6.460
GRAVY (calculated)
-0.271
Length
662 amino acids
Sequence
(BLAST)
001: MASSDALLPI SAREEDPLLS DGSRSDPNAE THGRRRPVKG LLAVTFGLFF IAFYVALIAT HDGSRSNDVK FESDGTATTA SRARLAGVSE KSNDQLWKLS
101: GDRNTVAFSW NNSMLSWQRT GFHFQPEQNW MNDPNGPLFY KGWYHFFYQY NPNAAVWGDI VWGHAVSKDL IHWVHLPLAM VADQWYDANG VWTGSATFLE
201: DGSIVMLYTG STDKSVQVQN LAYPEDLNDP LLLKWVKFSG NPVLVPPPGI LPKDFRDPTT AWKTSAGKWR ITIGSKINRT GISLVYDTTD FKTYEKLDTL
301: LHKVPNTGMW ECVDFYPVSK TLVKGLDTSV NGPVVKHIVK ASMDDTRIDH YAIGTYFDSN GTWIPDDPTI DVGISTSLRY DYGKFYASKT FYDQNKGRRI
401: LWGWIGESDS ESADVQKGWS SLQGIPRTVV LDTKTGKNLV QWPVDEVKSL RLSSKKFDME VGPGSFVNID VGSAAQLDIE AEFEIKKESL DKILGDASAA
501: AEAEEFSCQK SGGSTVRGAL GPFGFSVLAH ESLSEQTPVY FYVAKGKDSK LKTFFCTDSS RSSFANDVVK PIYGSSVPVM KGEKLTMRIL VDHSIVEAFG
601: QGGRTCITSR VYPTKAIYGA AKLFLFNNAI DATITASFNV WQMNSAFIHP YSEEAVRALS RT
Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)
001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT
Arabidopsis Description
BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.