CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 2
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX78905
CDX98596
CDX99411
CDY01565

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12240.1	CDX78905	AT4G19030.1	21798944
AT1G12240.1	CDX98596	AT4G19030.1	21798944
AT1G12240.1	CDX99411	AT4G19030.1	21798944
AT1G12240.1	CDY01565	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26548	Canola	vacuole	93.53	95.93
CDY30056	Canola	vacuole	88.24	91.05
CDX98080	Canola	cytosol, peroxisome, vacuole	88.38	90.79
AT1G12240.1	Thale cress	vacuole	86.62	88.7
CDY46906	Canola	vacuole	76.47	79.51
CDY31826	Canola	vacuole	75.88	78.9
CDY03265	Canola	vacuole	73.09	78.76
CDY39804	Canola	vacuole	72.94	78.61
CDY39805	Canola	cytosol, golgi, plastid, vacuole	68.38	76.73
CDY03264	Canola	cytosol, golgi, vacuole	68.24	76.57
VIT_02s0154g00090.t01	Wine grape	vacuole	53.68	69.66
KRH57351	Soybean	endoplasmic reticulum	60.29	63.57
KRH04082	Soybean	endoplasmic reticulum	59.41	62.64
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	48.38	61.96
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	50.15	61.55
KRH28036	Soybean	vacuole	55.29	60.74
KRH77397	Soybean	endoplasmic reticulum	60.29	60.74
GSMUA_Achr5P19880_001	Banana	mitochondrion, vacuole	49.85	60.32
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	56.91	59.26
Solyc08g079080.2.1	Tomato	unclear	56.47	58.9
HORVU2Hr1G091990.6	Barley	cytosol	21.03	58.37
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	55.15	57.16
TraesCS2B01G403000.1	Wheat	vacuole	53.82	55.54
TraesCS2A01G386100.2	Wheat	plastid, vacuole	53.53	55.49
TraesCS2D01G382600.2	Wheat	vacuole	53.68	55.05
Zm00001d002830_P001	Maize	extracellular	53.24	54.27
Zm00001d025943_P001	Maize	vacuole	53.24	54.11
Zm00001d054075_P001	Maize	plastid, vacuole	42.65	52.92
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	52.21	52.67
Zm00001d014947_P001	Maize	plasma membrane	51.76	52.3
Os02t0106100-01	Rice	plasma membrane	50.74	52.11
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	49.71	51.37
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	49.56	51.29
TraesCS4A01G485500.1	Wheat	mitochondrion	38.38	51.28
TraesCS7D01G009300.1	Wheat	mitochondrion	38.38	51.28
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	49.56	51.22
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	48.97	50.45
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	48.53	49.18
TraesCS6A01G023100.1	Wheat	vacuole	48.38	48.81
HORVU6Hr1G004000.2	Barley	endoplasmic reticulum, peroxisome, vacuole	47.35	48.79
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	48.38	48.67
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	48.09	48.59
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	48.09	48.59
OQU82023	Sorghum	plastid	50.0	48.3
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	47.79	48.29
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	47.35	48.28
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	47.94	48.22
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	47.5	48.21
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	47.94	48.08
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	47.35	47.92
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	42.79	47.78
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	47.65	47.72
TraesCS4A01G485800.1	Wheat	vacuole	44.71	46.91
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	42.21	46.82
TraesCS7D01G008900.1	Wheat	vacuole	44.41	46.6
HORVU0Hr1G018850.4	Barley	vacuole	42.06	46.58
HORVU7Hr1G000270.1	Barley	mitochondrion	43.68	46.48
TraesCS7A01G009200.2	Wheat	vacuole	44.12	46.3
TraesCS7A01G009400.1	Wheat	vacuole	44.12	46.23
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	43.97	46.14
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	43.68	46.12
TraesCS7D01G008700.1	Wheat	vacuole	44.85	46.07
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	44.71	45.99
TraesCS4A01G486000.1	Wheat	golgi	44.85	45.93
TraesCS4A01G485400.2	Wheat	golgi	41.47	45.78
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	43.24	45.72
TraesCS7D01G055000.1	Wheat	plastid	43.24	45.72
TraesCS7A01G009600.3	Wheat	mitochondrion	43.68	45.55
TraesCS7A01G009800.2	Wheat	golgi, unclear	41.47	45.48
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	41.47	45.41
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	43.38	45.38
HORVU7Hr1G000250.3	Barley	vacuole	43.09	44.6
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	41.47	43.86
TraesCS7A01G009500.3	Wheat	plastid	41.47	43.59
CDX95352	Canola	vacuole	29.26	43.54
HORVU7Hr1G001040.6	Barley	plastid	42.5	43.33
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	41.91	42.73
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	41.62	42.3
HORVU7Hr1G000260.1	Barley	plastid	45.0	42.27
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	43.53	42.23
CDY51739	Canola	vacuole	36.32	42.22
CDY37487	Canola	vacuole	36.18	42.12
TraesCS7A01G060300.2	Wheat	mitochondrion	43.09	41.74
CDY23227	Canola	vacuole	36.18	41.55
CDX97519	Canola	vacuole	35.29	41.1
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	15.44	40.54
CDY43744	Canola	vacuole	35.15	40.37
CDX97518	Canola	endoplasmic reticulum, vacuole	33.68	40.03
CDY23643	Canola	vacuole	31.18	40.0
CDY33067	Canola	vacuole	33.97	39.9
CDX79661	Canola	vacuole	34.56	39.83
CDY24053	Canola	vacuole	33.82	39.72
CDX84575	Canola	vacuole	34.26	39.49
CDX97155	Canola	peroxisome, plastid, vacuole	31.32	39.08
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	43.38	39.02
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	31.18	38.97
CDY23644	Canola	vacuole	34.41	38.68
CDX70431	Canola	cytosol	10.0	38.2
CDX70432	Canola	cytosol	15.29	34.32
CDX78455	Canola	cytosol	32.06	22.06
CDX70433	Canola	cytosol	6.03	7.51

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	GO:A0A078FSU2
UniProt:A0A078FSU2	InterPro:Beta-fructofuranosidase	EnsemblPlants:CDY15984	ProteinID:CDY15984	ProteinID:CDY15984.1	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564	GO:GO:0004575	GO:GO:0005575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00090368001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	PFAM:PF11837	PANTHER:PTHR31953	PANTHER:PTHR31953:SF31
SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix	UniParc:UPI0004EED568	SEG:seg

Description

BnaC08g41390DBnaC08g41390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSU2]

Coordinates

chrLK032060:+:97755..101591

Molecular Weight (calculated)

75460.8 Da

IEP (calculated)

6.461

GRAVY (calculated)

-0.290

Length

680 amino acids

Sequence
(BLAST)

001: MASSDALLPI SAREEDPLLS DGSRSDPNAE THRRRRPVKG LLAVSFGLLF IAFYVVLIPT HDGSSRSNDV KIENDETATT TSRARLAGVS EKSNGQLWKL
101: SGERNTVSFA WNNSVLSWQR TAFHFQPEQN WMNDPNEIIG GTRSSGSHNV ITRNPRPLFY KGWYHFFYQY NPNAAVWGDI VWGHAVSKDL IHWVHLPIAM
201: VADQWYDANG VWTGSATFLD DGSLAMLYTG STDKSVQVQN LAYPEDLNDP LLLKWVKYSG NPVLVPPPGI LPKDFRDPTT AWKTSDGKWR ITIGSKINKT
301: GISLVYDTID FKTYEKQDAL LHKVPNTGMW ECVDFYPVSK TAVNGLDTSV NGPNVKHIVK ASMDDTRFDH YAVGTYFDSN GTWIPDDPTI DVGMSASLRY
401: DYGKFYASKT FYDQNKGRRI LWSWIGESDS EAADVQKGWS SLQGIPRTVV LDTKTGKNLV QWPVEEIKSL RLSSKQFDME VGPGSVVPVD VDSAAQLDIE
501: AEFEINKESL DKILGDASVV AEEFSCQKSG GASVRGALGP FGFSVLADKS LSEQTPVYFY VAKGKDSKLK TFFCIDTSRS TFANDVVKPI YGSSVPVLKG
601: EKLTMRILVD HSIVEGFAQA GRTCITSRVY PTKAIYGAAK LFVFNNAIDA TITASFKVWQ MNSAFIHPYS EEAVRALSST

Best Arabidopsis Sequence Match ( AT1G12240.1 )
(BLAST)

001: MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK
101: LSGDRNTPAF EWNNSMLSWQ RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI AMVADQWYDS NGVWTGSATF
201: LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD
301: TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR
401: RVLWSWIGES DSEASDVQKG WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD IEAEFEINKE SLDKIIGNAS
501: VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA
601: FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA LSRT

Arabidopsis Description

BFRUCT4Acid beta-fructofuranosidase 4, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q39041]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.