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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, vacuole, peroxisome

Predictor Summary:
  • plastid 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 2
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plastid, vacuole
Any Predictor:endoplasmic reticulum, peroxisome, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014947_P001 Maize plasma membrane 90.21 90.34
Zm00001d054075_P001 Maize plastid, vacuole 67.36 82.85
Os02t0106100-01 Rice plasma membrane 78.49 79.91
HORVU6Hr1G004000.2 Barley endoplasmic reticulum, peroxisome, vacuole 71.66 73.18
TraesCS6B01G031600.1 Wheat peroxisome, plastid, vacuole 71.66 72.41
TraesCS6D01G026400.1 Wheat peroxisome, plastid, vacuole 72.11 72.32
TraesCS6A01G023200.1 Wheat peroxisome, plastid, vacuole 71.66 72.09
TraesCS6B01G031700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 71.66 71.77
TraesCS6A01G023300.2 Wheat peroxisome, plastid, vacuole 71.66 71.77
TraesCS6D01G026500.2 Wheat peroxisome, plastid, vacuole 72.11 71.68
TraesCS6A01G023100.1 Wheat vacuole 71.66 71.66
TraesCS6B01G031500.1 Wheat extracellular, peroxisome, vacuole 71.81 71.6
TraesCS4A01G484800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 69.88 71.58
TraesCS6B01G031300.1 Wheat peroxisome, plastid, vacuole 71.36 71.47
TraesCS7D01G010000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 69.73 71.43
TraesCS6D01G026600.2 Wheat endoplasmic reticulum, peroxisome, vacuole 71.07 71.39
TraesCS7A01G010200.1 Wheat endoplasmic reticulum, peroxisome, vacuole 69.58 71.39
TraesCS6D01G026300.2 Wheat peroxisome, plastid, vacuole 71.51 71.3
HORVU7Hr1G001070.1 Barley cytosol, peroxisome, vacuole 69.29 70.76
HORVU6Hr1G004010.8 Barley peroxisome, plastid, vacuole 71.22 70.69
GSMUA_Achr1P11470_001 Banana peroxisome, plastid, vacuole 56.53 68.77
TraesCS4A01G485500.1 Wheat mitochondrion 50.74 67.19
TraesCS7D01G009300.1 Wheat mitochondrion 50.3 66.6
TraesCS4A01G485000.2 Wheat endoplasmic reticulum, peroxisome, vacuole 57.42 63.13
TraesCS7A01G009700.1 Wheat mitochondrion, plastid 56.82 62.89
TraesCS7A01G009100.1 Wheat endoplasmic reticulum, peroxisome, vacuole 60.98 62.18
HORVU0Hr1G018850.4 Barley vacuole 56.53 62.05
VIT_16s0022g00670.t01 Wine grape cytosol 49.41 62.01
TraesCS7D01G008700.1 Wheat vacuole 60.83 61.93
TraesCS4A01G485400.2 Wheat golgi 56.53 61.85
TraesCS4A01G486000.1 Wheat golgi 60.83 61.75
TraesCS7D01G055000.1 Wheat plastid 58.31 61.12
HORVU7Hr1G000270.1 Barley mitochondrion 57.86 61.03
TraesCS7A01G009800.2 Wheat golgi, unclear 56.08 60.97
TraesCS4A01G485900.1 Wheat cytosol, peroxisome, vacuole 58.61 60.96
HORVU7Hr1G000250.3 Barley vacuole 59.35 60.88
VIT_02s0154g00090.t01 Wine grape vacuole 47.33 60.88
TraesCS7D01G009400.2 Wheat cytosol, plastid, vacuole 56.08 60.87
TraesCS7A01G060400.1 Wheat cytosol, peroxisome, plastid, vacuole 58.01 60.81
TraesCS7A01G009200.2 Wheat vacuole 58.46 60.8
TraesCS4A01G485800.1 Wheat vacuole 58.31 60.65
TraesCS7D01G008800.2 Wheat cytosol, plastid, vacuole 57.86 60.56
TraesCS7D01G008900.1 Wheat vacuole 58.01 60.34
TraesCS7A01G009600.3 Wheat mitochondrion 58.16 60.12
TraesCS4A01G485600.1 Wheat mitochondrion, vacuole 57.72 59.85
TraesCS7A01G009400.1 Wheat vacuole 57.57 59.78
TraesCS7D01G009700.1 Wheat endoplasmic reticulum, peroxisome, vacuole 56.82 59.56
TraesCS7A01G009500.3 Wheat plastid 55.34 57.65
HORVU0Hr1G018840.1 Barley cytosol, plastid, vacuole 21.96 57.14
HORVU7Hr1G001040.6 Barley plastid 56.53 57.12
HORVU7Hr1G000260.1 Barley plastid 61.13 56.91
KRH04082 Soybean endoplasmic reticulum 54.45 56.9
KRH57351 Soybean endoplasmic reticulum 54.15 56.59
TraesCS4A01G485700.1 Wheat cytosol, mitochondrion, peroxisome, plastid, vacuole 55.19 55.77
TraesCS7D01G054800.3 Wheat mitochondrion, vacuole 57.72 55.49
TraesCS7D01G009100.1 Wheat cytosol, mitochondrion, peroxisome, vacuole 55.04 55.46
PGSC0003DMT400035987 Potato cytosol, extracellular 52.52 55.4
PGSC0003DMT400012217 Potato cytosol, peroxisome, plastid, vacuole 53.41 55.13
KRH28036 Soybean vacuole 50.59 55.09
Solyc08g079080.2.1 Tomato unclear 53.26 55.06
CDY39804 Canola vacuole 51.48 54.99
TraesCS7A01G060300.2 Wheat mitochondrion 57.12 54.84
Solyc03g083910.2.1 Tomato extracellular 52.67 54.78
CDY03265 Canola vacuole 50.89 54.36
KRH77397 Soybean endoplasmic reticulum 54.15 54.07
CDY30056 Canola vacuole 52.82 54.02
Bra019749.1-P Field mustard nucleus, peroxisome, vacuole 52.82 53.78
AT1G62660.1 Thale cress vacuole 51.63 53.7
AT1G12240.1 Thale cress vacuole 52.67 53.46
Bra036653.1-P Field mustard vacuole 51.93 53.44
CDX98080 Canola cytosol, peroxisome, vacuole 52.37 53.32
CDY26548 Canola vacuole 52.37 53.24
CDY31826 Canola vacuole 51.63 53.21
Bra027030.1-P Field mustard vacuole 51.48 53.06
CDY46906 Canola vacuole 51.48 53.06
KRH23803 Soybean vacuole 47.92 52.61
OQU82023 Sorghum plastid 54.9 52.56
KRH56348 Soybean vacuole 50.3 52.48
CDY03264 Canola cytosol, golgi, vacuole 47.18 52.48
CDY15984 Canola vacuole 52.67 52.21
Bra036652.1-P Field mustard cytosol, golgi, plastid, vacuole 46.29 52.17
TraesCS7D01G009200.2 Wheat cytosol, mitochondrion, plasma membrane, plastid, vacuole 58.31 51.98
CDY39805 Canola cytosol, golgi, plastid, vacuole 46.59 51.82
KRH39981 Soybean vacuole 48.22 51.59
Bra026984.1-P Field mustard vacuole 52.37 51.16
EER93500 Sorghum vacuole 37.24 43.35
KXG30339 Sorghum vacuole 36.2 42.0
EES10748 Sorghum vacuole 36.2 41.08
OQU81520 Sorghum vacuole 36.8 40.59
EES13037 Sorghum vacuole 35.31 40.34
EES13040 Sorghum mitochondrion 33.23 40.29
OQU81521 Sorghum vacuole 35.61 40.07
OQU81519 Sorghum vacuole 35.31 39.8
KXG27359 Sorghum plastid 34.12 36.8
OQU88249 Sorghum plastid, vacuole 32.2 34.39
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.2ProteinID:AFH57543.1
ProteinID:AGO03821.1ProteinID:AGO03822.1InterPro:Beta-fructofuranosidaseInterPro:ConA-like_dom_sfGO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0004564GO:GO:0004575GO:GO:0005575GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfUniProt:I0B6X1InterPro:IPR023296
EMBL:KF921516EnsemblPlants:OQU84152ProteinID:OQU84152ProteinID:OQU84152.1PFAM:PF00251PFAM:PF08244
PFAM:PF11837ScanProsite:PS00609PANTHER:PTHR31953PANTHER:PTHR31953:SF10SMART:SM00640EnsemblPlantsGene:SORBI_3004G004800
SUPFAM:SSF49899SUPFAM:SSF75005TMHMM:TMhelixUniParc:UPI000259F949SEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:418239..423162
Molecular Weight (calculated)
73426.9 Da
IEP (calculated)
6.098
GRAVY (calculated)
-0.300
Length
674 amino acids
Sequence
(BLAST)
001: METRDTTAPL PYSYTPLPAA DAASAEVTGT GHRGGRSRRR SLCAAALVLS AALLLAVAAL TGVGRRVDVV PGGAGSPRST SSISRGPDAG VSEKTSGAWS
101: GGGRLRSDGA GGNAFPWSNA MLQWQRTGFH FQPHMNWMND PNGPVYYKGW YHLFYQYNPD GAIWGNKIAW GHAVSRDLIH WRHLPLAMVP DQWYDTNGVW
201: TGSATTLPDG RLAMLYTGST NASVQVQCLA VPADDADPLL TNWTKYEGNP VLYPPPGIGP KDFRDPTTAW FDPSDNTWRI VIGSKDDAEG DHAGIAVVYR
301: TKDFVSFELL PGLLHRVART GMWECIDFYP VATRGKASGN GVDMSDAFGK NGAIVGDVVH VMKASMDDDR HDYYALGRYD AATNEWTPLD AEKDVGIGLR
401: YDWGKFYASK TFYDPAKRRR VLWGWVGETD SERADVSKGW ASLQGIPRTV LLDTKTGSNL LQWPVEEAET LRTNSTDLSG ITIDYGSAFP LNLRRATQLD
501: IEAEFQLDRR AVMSLNEADV GYNCSTSGGA AARGALGPFG LLVLADKHLR EQTAVYFYVA KGLDGSLTTH FCQDESRSSS ANDIVKRVVG SSVPVLDDET
601: TLSLRVLVDH SIVESFAQGG RSTATSRVYP TEAIYANAGV FLFNNATAAR VTAKKLVVHE MDSSYNHDYM VTDI
Best Arabidopsis Sequence Match ( AT1G62660.1 )
(BLAST)
001: MASTEALLPV TSLQDPLSES RSDQIPETRR RRPIKVHLAV YSGLLLIALY VTLIVTHDGS KAEIATESRP RMAGVSEKSN DGVWISSDDG KVEAFPWNNT
101: ILSWQRTAFH FQPEKNWMND PNGPLFYKGW YHFFYQYNPN AAVWGDIVWG HAVSKDLIHW LYLPIAMVPD QWYDANGVWT GSATFLDDGS IVMLYTGSTD
201: EFVQVQNLAY PEDPSDPLLL KWVKFSGNPV LVPPPGIGAK DFRDPTTAWK TSSGKWRITI GSKINRTGIS LIYDTTDFKT YEKHETLLHQ VPNTGMWECV
301: DFYPVSKTQL NGLDTSVNGP DVKHVIKASM DDTRIDHYAI GTYDDSNATW VPDNPSIDVG ISTGLRYDYG KYYASKTFYD QNKGRRILWG WIGESDSEAA
401: DVQKGWSSVQ GIPRTVVLDT RTHKNLVQWP VEEIKSLRLS SKKFDMTIGP GTVVPVDVGS ATQLDIEAEF EIKTDDLKLF FDDDSVEADN KFSCETNGGS
501: TARGALGPFG FSVLADEGLS EQTPVYFYVT KGKHSKLNTV FCTDTSRSTL ANDVVKPIYG SFVPVLKGEK LTMRILVDHS IVEGFAQGGR SCITSRVYPT
601: KAIYGATKLF LFNNAIDATV TASFTVWQMN NAFIHPYSSD DLGVPSST
Arabidopsis Description
BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.