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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025355_P001 Maize vacuole 88.46 90.12
Os04t0413200-01 Rice plasma membrane 78.09 79.69
HORVU5Hr1G123930.2 Barley vacuole 74.08 76.12
TraesCS5D01G552900.1 Wheat vacuole 74.25 76.03
TraesCSU01G175300.1 Wheat vacuole 66.72 75.57
TraesCSU01G173900.1 Wheat vacuole 66.72 75.57
TraesCS5B01G556600.1 Wheat vacuole 73.41 75.17
TraesCS4A01G321700.1 Wheat vacuole 73.24 75.13
TraesCS3D01G015900.1 Wheat cytosol 67.73 75.0
TraesCS3A01G029700.1 Wheat cytosol 41.3 74.4
TraesCSU01G216800.1 Wheat mitochondrion 49.0 73.99
TraesCS3B01G028500.1 Wheat vacuole 71.74 73.58
HORVU3Hr1G005350.4 Barley golgi, vacuole 71.91 73.13
TraesCSU01G250400.1 Wheat cytosol 12.21 71.57
TraesCS3B01G028200.1 Wheat cytosol 12.04 70.59
TraesCS3B01G054100.1 Wheat cytosol 11.87 69.61
TraesCS3B01G028100.1 Wheat vacuole 43.31 68.34
GSMUA_Achr6P13160_001 Banana vacuole 61.04 62.39
EER93500 Sorghum vacuole 60.2 62.18
KXG30339 Sorghum vacuole 59.2 60.93
GSMUA_AchrUn_... Banana vacuole 54.18 59.45
EES10748 Sorghum vacuole 58.36 58.75
GSMUA_Achr4P29900_001 Banana golgi, vacuole 56.52 57.78
OQU81520 Sorghum vacuole 58.7 57.45
PGSC0003DMT400072606 Potato cytosol 51.34 57.28
PGSC0003DMT400023091 Potato cytosol, mitochondrion, plastid, vacuole 49.0 57.12
OQU81521 Sorghum vacuole 57.19 57.1
PGSC0003DMT400023090 Potato cytosol, extracellular, mitochondrion, vacuole 48.83 57.03
GSMUA_Achr10P... Banana vacuole 13.55 55.86
Solyc10g085360.1.1 Tomato nucleus 53.68 55.83
Solyc10g083300.1.1 Tomato nucleus 54.68 55.52
CDY23227 Canola vacuole 54.35 54.9
Bra033419.1-P Field mustard vacuole 54.35 54.9
Solyc09g010090.2.1 Tomato vacuole 53.51 54.89
AT3G52600.1 Thale cress vacuole 54.01 54.75
CDX95352 Canola vacuole 41.81 54.7
PGSC0003DMT400028670 Potato golgi, vacuole 52.51 54.61
PGSC0003DMT400021619 Potato cytosol 46.66 54.49
AT2G36190.1 Thale cress vacuole 53.51 54.15
CDX79661 Canola vacuole 53.18 53.9
CDY43744 Canola vacuole 53.34 53.89
CDX84575 Canola vacuole 53.01 53.73
Bra023053.1-P Field mustard vacuole 52.51 53.49
PGSC0003DMT400072608 Potato extracellular 51.34 52.75
Bra017257.1-P Field mustard cytosol 36.79 52.63
Solyc10g083290.1.1 Tomato extracellular 51.0 52.41
Solyc10g085650.1.1 Tomato unclear 50.33 52.35
Solyc09g010080.2.1 Tomato vacuole 50.84 52.05
VIT_00s2527g00010.t01 Wine grape cytosol, peroxisome, vacuole 17.73 51.96
Solyc10g085640.1.1 Tomato unclear 46.82 50.27
PGSC0003DMT400093309 Potato cytosol 6.86 50.0
EES13040 Sorghum mitochondrion 43.81 47.12
EES13037 Sorghum vacuole 45.65 46.27
KXG27359 Sorghum plastid 46.66 44.64
PGSC0003DMT400097344 Potato cytosol 11.37 43.87
OQU88249 Sorghum plastid, vacuole 45.32 42.95
KRH08807 Soybean cytosol, nucleus, vacuole 13.04 36.62
OQU84152 Sorghum endoplasmic reticulum, peroxisome, plastid, vacuole 39.8 35.31
OQU82023 Sorghum plastid 39.3 33.38
Protein Annotations
KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26Gene3D:2.115.10.20Gene3D:2.60.120.560MapMan:3.1.4.1.1EntrezGene:8155693
UniProt:C6JS50InterPro:ConA-like_dom_sfProteinID:EES20530.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_ASInterPro:Glyco_hydro_32_CInterPro:Glyco_hydro_32_NInterPro:Glyco_hydro_beta-prop_sfInterPro:IPR023296ProteinID:KXG18783.1
EnsemblPlants:OQU81519ProteinID:OQU81519ProteinID:OQU81519.1PFAM:PF00251PFAM:PF08244ScanProsite:PS00609
PANTHER:PTHR31953PANTHER:PTHR31953:SF11SMART:SM00640EnsemblPlantsGene:SORBI_3006G070032SUPFAM:SSF49899SUPFAM:SSF75005
TMHMM:TMhelixUniParc:UPI0001AFF79BRefSeq:XP_002489109.1SEG:seg::
Description
hypothetical protein
Coordinates
chr6:-:43277256..43279871
Molecular Weight (calculated)
67723.4 Da
IEP (calculated)
8.091
GRAVY (calculated)
-0.395
Length
598 amino acids
Sequence
(BLAST)
001: MCFSLLYGIE MGTTGMAAAL LLVAVLLHCT GTAMVRASHT VYPELQSLEV EKVDEMSRTG YHFQPPKHWI NDPNGPMYYK GLYHLFYQYN PKGAVWGNIE
101: WAHSVSTDLI DWTALDPGIY PSKNFDIKGC WSGSATVLPS GMPIVMYTGI DPNDHQVQNL AYPKNLSDPF LREWVKPDYN PIISPDSGIN ASAFRDPTTA
201: WLGPDKHWRL LVGSRVDDKG LAVLYRSRDF KRWVKAHHPL HSGLTGMWEC PDFFPVAVHG GSRHHRRGVD TAELHDRALA EEVKYVLKVS LDMTRYEYYT
301: VGSYDHATDR YTPDAGFRDN DYGLRYDYGD FYASKSFYDP AKRRRILWGW ANESDTVPDD RRKGWAGIQA IPRKLWLSPG GKQLIQWPVE EVKALRGKHV
401: NVSDQVVKGG QYFEVDGFKS VQSDVEVTFA VDDLSKAEQF NPKWFTDPQR LCKKRGAREK GEVGPFGLWV LAAGDLTERT AVFFRVFRTN TSRLVVLMCN
501: DPTNSTFEAQ VYRPTFASFV NHDIAKTKTI ALRTLIDHSV VESFGAGGRT CILSRVYPKK ALGDNAHLFV FNHGEVDVKV AKLDAWEMRT PKMNAPAQ
Best Arabidopsis Sequence Match ( AT3G52600.1 )
(BLAST)
001: MSAPKFGYVL LLIVLINISN NGVDAFHKVF KKLQSKSTSL ESVSPLHRTA YHFQPPRHWI NDPNAPMLYK GVYHLFYQYN PKGAVWGNIV WAHSVSKDLI
101: NWEALEPAIY PSKWFDINGT WSGSATHVPG KGPVILYTGI TENQTQIQNY AIPQDLSDPY LKTWIKPDDN PIVKPDNGEN GSAFRDPTTA WFNKKDGYWR
201: MLVGSKRKNR GIAYMYKSRD FKKWVKSKRP IHSRKKTGMW ECPDFFPVSV TDKKNGLDFS YDGPNAKHVL KVSLDLTRYE YYTLGTYDTK KDRYRPDGYT
301: PDGWDGLRFD YGNYYASKTF FDDKTNRRIL WGWANESDTV QDDTVKGWAG IQLIPRTILL DSSGKQLVFW PIEEIESLRG KNVQMTNQKM EMGQRFEVQG
401: ITPAQVDVDV TFNVGNLEKA EKFDESFATK PLELCNLKGS NVNGGVGPFG LITLATSDLE EYTPVFFRVF KDAASNKPKV LMCSDAKPSS LKKDTGTDAK
501: ERMYKPSFAG FVDVGLLDGK ISLRSLIDHS VVESFGAKGK TVITSRVYPT KAVGEKAHLF VFNNGSQPVT VESLNAWNMQ KPLKMNQGAK
Arabidopsis Description
CWINV2Beta-fructofuranosidase, insoluble isoenzyme CWINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEF8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.