Factsheet for VIT_16s0022g00670.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	27.19	71.57
VIT_02s0154g00090.t01	Wine grape	vacuole	63.13	64.69
GSMUA_Achr5P19880_001	Banana	mitochondrion, vacuole	67.6	64.59
GSMUA_Achr11P...	Banana	mitochondrion, vacuole	61.83	62.52
GSMUA_Achr1P11470_001	Banana	peroxisome, plastid, vacuole	62.01	60.11
HORVU2Hr1G091990.6	Barley	cytosol	27.0	59.18
KRH56348	Soybean	vacuole	70.39	58.51
KRH39981	Soybean	vacuole	67.41	57.46
KRH23803	Soybean	vacuole	65.36	57.17
PGSC0003DMT400035987	Potato	cytosol, extracellular	67.97	57.12
Solyc03g083910.2.1	Tomato	extracellular	68.16	56.48
TraesCS2B01G403000.1	Wheat	vacuole	65.36	53.26
TraesCS2A01G386100.2	Wheat	plastid, vacuole	64.8	53.05
TraesCS2D01G382600.2	Wheat	vacuole	65.36	52.94
Zm00001d025943_P001	Maize	vacuole	65.92	52.91
TraesCS4A01G485500.1	Wheat	mitochondrion	50.09	52.85
Zm00001d002830_P001	Maize	extracellular	65.36	52.62
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	64.06	52.44
TraesCS7D01G009300.1	Wheat	mitochondrion	49.35	52.06
Zm00001d014947_P001	Maize	plasma membrane	62.76	50.07
Os02t0106100-01	Rice	plasma membrane	61.08	49.55
OQU84152	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	62.01	49.41
OQU82023	Sorghum	plastid	63.87	48.72
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.4	48.48
TraesCS7A01G010200.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.22	48.4
TraesCS4A01G484800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.22	48.33
Zm00001d054075_P001	Maize	plastid, vacuole	48.98	47.99
HORVU6Hr1G004000.2	Barley	endoplasmic reticulum, peroxisome, vacuole	58.66	47.73
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	59.03	47.53
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	59.4	47.47
TraesCS6A01G023200.1	Wheat	peroxisome, plastid, vacuole	59.22	47.46
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.4	47.4
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	59.22	47.39
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	59.59	47.34
TraesCS6A01G023100.1	Wheat	vacuole	59.4	47.33
HORVU6Hr1G004010.8	Barley	peroxisome, plastid, vacuole	59.78	47.28
TraesCS6A01G023300.2	Wheat	peroxisome, plastid, vacuole	59.22	47.25
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	59.22	47.04
TraesCS4A01G485000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	53.63	46.98
HORVU7Hr1G001070.1	Barley	cytosol, peroxisome, vacuole	57.73	46.97
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	59.22	46.9
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	58.66	46.81
HORVU7Hr1G000270.1	Barley	mitochondrion	55.68	46.79
TraesCS7A01G009700.1	Wheat	mitochondrion, plastid	52.89	46.63
TraesCS4A01G485800.1	Wheat	vacuole	55.87	46.3
TraesCS7D01G008900.1	Wheat	vacuole	55.68	46.14
TraesCS4A01G485400.2	Wheat	golgi	52.89	46.1
HORVU0Hr1G018850.4	Barley	vacuole	52.51	45.93
TraesCS7A01G009400.1	Wheat	vacuole	55.31	45.76
TraesCS7A01G009800.2	Wheat	golgi, unclear	52.51	45.48
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	52.14	45.09
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	53.07	44.32
TraesCS4A01G485600.1	Wheat	mitochondrion, vacuole	53.26	44.0
TraesCS7A01G009600.3	Wheat	mitochondrion	53.26	43.87
TraesCS7D01G055000.1	Wheat	plastid	52.51	43.86
VIT_04s0008g01150.t01	Wine grape	vacuole	46.55	43.78
TraesCS7A01G060400.1	Wheat	cytosol, peroxisome, plastid, vacuole	52.14	43.55
TraesCS7A01G009200.2	Wheat	vacuole	52.51	43.52
TraesCS4A01G485900.1	Wheat	cytosol, peroxisome, vacuole	52.51	43.52
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	52.14	43.48
HORVU7Hr1G000250.3	Barley	vacuole	53.07	43.38
TraesCS7A01G009100.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	53.07	43.12
TraesCS7D01G008700.1	Wheat	vacuole	53.07	43.05
TraesCS4A01G486000.1	Wheat	golgi	53.07	42.92
HORVU7Hr1G001040.6	Barley	plastid	53.07	42.73
TraesCS7A01G009500.3	Wheat	plastid	51.4	42.66
HORVU0Hr1G018840.1	Barley	cytosol, plastid, vacuole	20.48	42.47
VIT_06s0004g08000.t01	Wine grape	vacuole	15.08	42.41
VIT_09s0002g02320.t01	Wine grape	vacuole	44.88	42.13
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	51.58	41.41
TraesCS4A01G485700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid, vacuole	51.4	41.38
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	54.0	41.37
TraesCS7A01G060300.2	Wheat	mitochondrion	53.07	40.6
VIT_08s0007g03060.t01	Wine grape	vacuole	42.83	40.42
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	45.62	40.36
HORVU7Hr1G000260.1	Barley	plastid	54.0	40.06
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	53.26	37.83

Protein Annotations

EntrezGene:100256970	wikigene:100256970	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.2	EMBL:AM442934
ProteinID:CAN80664	ProteinID:CAN80664.1	ProteinID:CCB49325	ProteinID:CCB49325.1	InterPro:ConA-like_dom_sf	UniProt:F6HAU0
EMBL:FN595506	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004564	GO:GO:0004575
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	EntrezGene:LOC100256970	wikigene:LOC100256970
PFAM:PF00251	PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF6	SMART:SM00640	SUPFAM:SSF49899
SUPFAM:SSF75005	TIGR:TC54756	TIGR:TC55383	TIGR:TC60693	TIGR:TC61643	UniParc:UPI0002108D4A
ArrayExpress:VIT_16s0022g00670	EnsemblPlantsGene:VIT_16s0022g00670	EnsemblPlants:VIT_16s0022g00670.t01	unigene:Vvi.7573	RefSeq:XP_002265534	RefSeq:XP_002265534.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr16:+:12049399..12054187

Molecular Weight (calculated)

59999.5 Da

IEP (calculated)

4.189

GRAVY (calculated)

-0.158

Length

537 amino acids

Sequence
(BLAST)

001: MFAWQRTAFH FQPEKNWMND PDGPLFHMGW YHLFYQYNPD SAVWGNITWG HAVSRDMIHW LYLPLAMVPD RWFDLNGVWT GSATILPNGQ IIMLYTGDTN
101: DSVQVQNLAY PANLSDPLLL HWIKYENNPV MVPPAGIGSD DFRDPTTMWV GADGNWRVAV GSLVNTTGIV LVFQTTNFTD FELLDGELHG VPGTGMWECV
201: DFYPVSINGV YGLDTSAHGP GIKHVLKASM DDNRHDYYAL GEYDPMTDTW TPDDPELDVG IGLRLDYGKY YASKTFYDQV KKRRILYGWI SEGDIESDDL
301: KKGWASLQSI PRTVLHDNKT GTYLLLWPIE EVESLRTNST EFEDVLLEPG SVVPLDIGSA SQLDIVAEFE VDNETLEAMV EADVIYNCST SAGAAGRGAL
401: GPFGILVLAD DTLSELTPIY FYIAKDTDGS YKTFFCTDLS RSSLAVDDVD QRIYGSIVPV LDDEKPTMRV LVDHSIVEGF SQGGRSCITT RVYPTEAIYG
501: AARLFLFNNA TGVNVTASIK IWEMASADIH PYPLDQP

Best Arabidopsis Sequence Match ( AT1G62660.1 )
(BLAST)

001: MASTEALLPV TSLQDPLSES RSDQIPETRR RRPIKVHLAV YSGLLLIALY VTLIVTHDGS KAEIATESRP RMAGVSEKSN DGVWISSDDG KVEAFPWNNT
101: ILSWQRTAFH FQPEKNWMND PNGPLFYKGW YHFFYQYNPN AAVWGDIVWG HAVSKDLIHW LYLPIAMVPD QWYDANGVWT GSATFLDDGS IVMLYTGSTD
201: EFVQVQNLAY PEDPSDPLLL KWVKFSGNPV LVPPPGIGAK DFRDPTTAWK TSSGKWRITI GSKINRTGIS LIYDTTDFKT YEKHETLLHQ VPNTGMWECV
301: DFYPVSKTQL NGLDTSVNGP DVKHVIKASM DDTRIDHYAI GTYDDSNATW VPDNPSIDVG ISTGLRYDYG KYYASKTFYD QNKGRRILWG WIGESDSEAA
401: DVQKGWSSVQ GIPRTVVLDT RTHKNLVQWP VEEIKSLRLS SKKFDMTIGP GTVVPVDVGS ATQLDIEAEF EIKTDDLKLF FDDDSVEADN KFSCETNGGS
501: TARGALGPFG FSVLADEGLS EQTPVYFYVT KGKHSKLNTV FCTDTSRSTL ANDVVKPIYG SFVPVLKGEK LTMRILVDHS IVEGFAQGGR SCITSRVYPT
601: KAIYGATKLF LFNNAIDATV TASFTVWQMN NAFIHPYSSD DLGVPSST

Arabidopsis Description

BFRUCT3Acid beta-fructofuranosidase 3, vacuolar [Source:UniProtKB/Swiss-Prot;Acc:Q43348]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.