Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- vacuole 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G557400.1 | Wheat | cytosol, peroxisome, vacuole | 94.77 | 87.12 |
| TraesCS3A01G516900.1 | Wheat | unclear | 78.66 | 64.94 |
| Os01t0966700-01 | Rice | extracellular, vacuole | 78.03 | 63.22 |
| TraesCS4A01G321500.1 | Wheat | vacuole | 78.66 | 62.77 |
| TraesCS4A01G321600.1 | Wheat | vacuole | 82.85 | 60.27 |
| TraesCS6A01G060800.1 | Wheat | vacuole | 75.52 | 60.07 |
| TraesCS6A01G060700.1 | Wheat | unclear, vacuole | 73.85 | 59.13 |
| OQU88249 | Sorghum | plastid, vacuole | 75.94 | 57.53 |
| Zm00001d041991_P001 | Maize | extracellular | 72.18 | 55.65 |
| TraesCS6A01G069000.1 | Wheat | vacuole | 68.83 | 55.57 |
| GSMUA_Achr6P13170_001 | Banana | vacuole | 58.16 | 47.36 |
| VIT_06s0004g08000.t01 | Wine grape | vacuole | 17.99 | 45.03 |
| TraesCS2A01G588200.1 | Wheat | vacuole | 48.33 | 43.75 |
| TraesCS2A01G488500.2 | Wheat | peroxisome | 47.49 | 41.58 |
| TraesCS2A01G489100.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.91 | 41.41 |
| TraesCS4A01G248700.1 | Wheat | vacuole | 49.37 | 40.62 |
| TraesCS5A01G526200.1 | Wheat | plastid | 48.95 | 40.28 |
| TraesCS2A01G489000.1 | Wheat | endoplasmic reticulum, vacuole | 49.16 | 39.7 |
| TraesCS1A01G394000.1 | Wheat | vacuole | 47.28 | 39.65 |
| TraesCS2A01G588300.1 | Wheat | vacuole | 48.74 | 39.42 |
| TraesCS1A01G214700.1 | Wheat | peroxisome, plastid, vacuole | 38.49 | 38.49 |
| TraesCS2A01G488900.1 | Wheat | vacuole | 47.7 | 38.45 |
| TraesCS2A01G588900.1 | Wheat | cytosol | 42.05 | 38.36 |
| TraesCS2A01G588700.1 | Wheat | vacuole | 47.28 | 38.31 |
| TraesCS4A01G321700.1 | Wheat | vacuole | 46.44 | 38.08 |
| TraesCS3A01G029700.1 | Wheat | cytosol | 26.36 | 37.95 |
| TraesCS2A01G590900.1 | Wheat | vacuole | 47.07 | 36.35 |
| TraesCS2A01G295400.1 | Wheat | unclear | 48.54 | 35.1 |
| TraesCS4A01G485500.1 | Wheat | mitochondrion | 34.94 | 32.81 |
| Solyc08g045720.1.1 | Tomato | extracellular | 9.21 | 29.93 |
| TraesCS2A01G386100.2 | Wheat | plastid, vacuole | 40.17 | 29.27 |
| TraesCS4A01G485400.2 | Wheat | golgi | 36.82 | 28.57 |
| TraesCS7A01G009800.2 | Wheat | golgi, unclear | 36.82 | 28.39 |
| TraesCS7A01G009400.1 | Wheat | vacuole | 38.49 | 28.35 |
| TraesCS4A01G485800.1 | Wheat | vacuole | 38.28 | 28.24 |
| TraesCS4A01G485000.2 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 36.19 | 28.22 |
| TraesCS7A01G009700.1 | Wheat | mitochondrion, plastid | 35.56 | 27.91 |
| TraesCS7A01G060400.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 37.24 | 27.68 |
| TraesCS7A01G010200.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 37.87 | 27.55 |
| TraesCS7A01G009600.3 | Wheat | mitochondrion | 37.45 | 27.45 |
| TraesCS4A01G485600.1 | Wheat | mitochondrion, vacuole | 37.03 | 27.23 |
| TraesCS4A01G484800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 37.45 | 27.2 |
| TraesCS6A01G023200.1 | Wheat | peroxisome, plastid, vacuole | 37.87 | 27.01 |
| TraesCS7A01G009100.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 37.03 | 26.78 |
| TraesCS6A01G023300.2 | Wheat | peroxisome, plastid, vacuole | 37.66 | 26.75 |
| TraesCS7A01G009200.2 | Wheat | vacuole | 36.19 | 26.7 |
| TraesCS4A01G485900.1 | Wheat | cytosol, peroxisome, vacuole | 36.19 | 26.7 |
| TraesCS4A01G486000.1 | Wheat | golgi | 37.03 | 26.66 |
| TraesCS7A01G009500.3 | Wheat | plastid | 35.77 | 26.43 |
| TraesCS6A01G023100.1 | Wheat | vacuole | 37.24 | 26.41 |
| TraesCS4A01G485700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid, vacuole | 36.19 | 25.94 |
| TraesCS7A01G060300.2 | Wheat | mitochondrion | 36.82 | 25.07 |
Protein Annotations
| Gene3D:2.115.10.20 | Gene3D:2.60.120.560 | MapMan:50.3.2 | ncoils:Coil | InterPro:ConA-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| InterPro:Glyco_hydro_32 | InterPro:Glyco_hydro_32_C | InterPro:Glyco_hydro_32_N | InterPro:Glyco_hydro_beta-prop_sf | InterPro:IPR023296 | PFAM:PF00251 |
| PFAM:PF08244 | PANTHER:PTHR31953 | PANTHER:PTHR31953:SF9 | SMART:SM00640 | SUPFAM:SSF49899 | SUPFAM:SSF75005 |
| EnsemblPlantsGene:TraesCS4A01G321400 | EnsemblPlants:TraesCS4A01G321400.1 | TIGR:cd08996 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:609815821..609817949
Molecular Weight (calculated)
54213.8 Da
IEP (calculated)
4.468
GRAVY (calculated)
-0.366
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWRSLEICD NNKDPSGPMY YNDIYHEFYQ YNPDGSNSPS LSYNIVWGHS VSTDLVNWIG LEPVLVPDTP SDICGCWTGS ATILPGNQPA ITYTGLINME
101: KHQVQNIALP KNRSDPYLRE WTKAGNNPVI QPVIPGLNSS QFRDPTTGWI GPDELWRIAV GADLNGSITA LLYKSEDFLN WTSVEHPLYS SNSFDMWECL
201: DFFAVLSGSN GGLDMSSAIP NGAKHVLKMG MDYSDKYMIG VYDLKRDVFV PDTVIDDYRL WLRIDYGNFY ASKSFFDSKQ GRRIIWAWSN ETDASSDDVA
301: KGWAGIHSIP RTIWLDSDGK RLLQWPVEEI ESLRRNEINH QGLELKKGDL FEIKGIDTLQ ADVEIDFELT SIDDAEPFDP SWLLDAPKQC READASVHGG
401: IGPFGLVILA SDNMEEQTVV HFRVYKSQEK YMILMCTDLR RSSLRPGLYT PAYGGFFEFD LEKERKISLR TLIDRSVL
101: KHQVQNIALP KNRSDPYLRE WTKAGNNPVI QPVIPGLNSS QFRDPTTGWI GPDELWRIAV GADLNGSITA LLYKSEDFLN WTSVEHPLYS SNSFDMWECL
201: DFFAVLSGSN GGLDMSSAIP NGAKHVLKMG MDYSDKYMIG VYDLKRDVFV PDTVIDDYRL WLRIDYGNFY ASKSFFDSKQ GRRIIWAWSN ETDASSDDVA
301: KGWAGIHSIP RTIWLDSDGK RLLQWPVEEI ESLRRNEINH QGLELKKGDL FEIKGIDTLQ ADVEIDFELT SIDDAEPFDP SWLLDAPKQC READASVHGG
401: IGPFGLVILA SDNMEEQTVV HFRVYKSQEK YMILMCTDLR RSSLRPGLYT PAYGGFFEFD LEKERKISLR TLIDRSVL
001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF
Arabidopsis Description
CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.