Factsheet for PGSC0003DMT400071784

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, secretory
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	68.99	35.11
PGSC0003DMT400006639	Potato	vacuole	55.04	24.87
PGSC0003DMT400021619	Potato	cytosol	47.67	24.02
PGSC0003DMT400072606	Potato	cytosol	49.61	23.88
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	46.9	23.59
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	45.74	23.05
PGSC0003DMT400072608	Potato	extracellular	51.16	22.68
PGSC0003DMT400028670	Potato	golgi, vacuole	50.39	22.61
PGSC0003DMT400035987	Potato	cytosol, extracellular	37.6	15.18
PGSC0003DMT400012217	Potato	cytosol, peroxisome, plastid, vacuole	37.98	15.01
PGSC0003DMT400097344	Potato	cytosol	3.88	6.45
PGSC0003DMT400093309	Potato	cytosol	0.78	2.44

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:50.3.2	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	UniProt:M1CPA7
PFAM:PF00251	PFAM:PF08244	EnsemblPlantsGene:PGSC0003DMG400027925	PGSC:PGSC0003DMG400027925	EnsemblPlants:PGSC0003DMT400071784	PANTHER:PTHR31953
PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI0002964668	:

Description

Cell wall apoplastic invertase [Source:PGSC_GENE;Acc:PGSC0003DMG400027925]

Coordinates

chr8:+:27921310..27925678

Molecular Weight (calculated)

29738.7 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.157

Length

258 amino acids

Sequence
(BLAST)

001: MWECPDFFLV SNVKHLLKVS VFQSQVEYYT IGTYDHDMDI FFPDSGSVDN ESGLRLDYGK YYASKSFFDS EKKRRILLAW VNESTSANID IMKRWSGLQA
101: FPRKIWLNKS GKQLVQWPVE EMAKLRTNQV ELQITTLKAG SLLEISGVTW AQADVEISFI IPMFDRAEVY DSNWRNPQEI CSQRGSSAKS GVVPFGLLVL
201: ASSDLQEFTT VFFIIFKKND KFVVLMCSDQ KRSSLGLDYD KTTYGAFWML ILLSKKFH

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.