Factsheet for TraesCS2B01G311900.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, nucleus

Predictor Summary:

plastid 1
mitochondrion 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, unclear
Any Predictor:	golgi, mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

unclear: 25769308
nucleus: 26228564

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G293200.1	Wheat	mitochondrion	97.11	97.58
TraesCS2A01G295400.1	Wheat	unclear	96.31	90.77
HORVU2Hr1G073210.3	Barley	vacuole	36.12	79.79
Os04t0413500-01	Rice	cytosol	75.6	78.76
EES10748	Sorghum	vacuole	73.84	77.44
Zm00001d003776_P001	Maize	extracellular	64.53	77.16
OQU81520	Sorghum	vacuole	74.64	76.1
OQU81521	Sorghum	vacuole	72.87	75.79
Zm00001d025354_P001	Maize	vacuole	70.79	74.37
TraesCS4B01G356800.1	Wheat	vacuole	67.58	72.46
TraesCS1B01G422700.1	Wheat	vacuole	61.48	66.96
GSMUA_Achr6P13160_001	Banana	vacuole	58.59	62.39
GSMUA_AchrUn_...	Banana	vacuole	53.45	61.1
TraesCS3B01G054100.1	Wheat	cytosol	9.95	60.78
TraesCS3B01G028200.1	Wheat	cytosol	9.95	60.78
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	49.76	60.43
TraesCS5B01G556600.1	Wheat	vacuole	56.34	60.1
TraesCS4B01G066000.1	Wheat	vacuole	55.54	59.45
TraesCS3B01G028500.1	Wheat	vacuole	55.54	59.35
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	48.48	58.98
PGSC0003DMT400072606	Potato	cytosol	50.56	58.77
PGSC0003DMT400021619	Potato	cytosol	48.15	58.59
Solyc10g085360.1.1	Tomato	nucleus	53.13	57.57
GSMUA_Achr4P29900_001	Banana	golgi, vacuole	53.93	57.44
PGSC0003DMT400028670	Potato	golgi, vacuole	52.97	57.39
PGSC0003DMT400093309	Potato	cytosol	7.54	57.32
Solyc10g083300.1.1	Tomato	nucleus	53.77	56.88
PGSC0003DMT400072608	Potato	extracellular	52.33	56.01
Solyc09g010090.2.1	Tomato	vacuole	52.33	55.92
Solyc10g083290.1.1	Tomato	extracellular	52.17	55.84
Solyc09g010080.2.1	Tomato	vacuole	52.17	55.65
Bra017257.1-P	Field mustard	cytosol	36.92	55.02
AT3G52600.1	Thale cress	vacuole	51.69	54.58
Solyc10g085650.1.1	Tomato	unclear	50.24	54.43
Bra033419.1-P	Field mustard	vacuole	51.36	54.05
CDY23227	Canola	vacuole	51.36	54.05
CDY43744	Canola	vacuole	50.72	53.38
CDX84575	Canola	vacuole	50.4	53.22
CDX95352	Canola	vacuole	39.0	53.17
AT2G36190.1	Thale cress	vacuole	50.4	53.13
CDX79661	Canola	vacuole	50.24	53.05
Bra023053.1-P	Field mustard	vacuole	49.92	52.98
Solyc10g085640.1.1	Tomato	unclear	47.35	52.96
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	17.34	52.94
TraesCS3B01G028100.1	Wheat	vacuole	31.62	51.98
TraesCS4B01G066200.1	Wheat	cytosol	8.51	50.96
TraesCS3B01G584500.1	Wheat	vacuole	46.39	49.91
TraesCS2B01G516700.2	Wheat	vacuole	47.19	49.49
TraesCS2B01G594600.1	Wheat	cytosol	7.87	49.49
TraesCS2B01G595000.1	Wheat	vacuole	41.73	49.24
GSMUA_Achr10P...	Banana	vacuole	11.4	48.97
TraesCS2B01G594700.1	Wheat	vacuole	46.07	48.64
TraesCS2B01G516800.1	Wheat	vacuole	46.07	48.56
TraesCS2B01G516300.1	Wheat	peroxisome	42.22	48.17
TraesCS5B01G557400.1	Wheat	cytosol, peroxisome, vacuole	40.13	48.08
TraesCS2B01G594900.1	Wheat	unclear	45.59	47.97
TraesCS6B01G080800.1	Wheat	cytosol, nucleus, vacuole	41.25	47.33
TraesCS2B01G516900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	41.25	46.47
TraesCS5B01G556700.1	Wheat	vacuole	43.66	46.34
PGSC0003DMT400097344	Potato	cytosol	11.4	45.81
TraesCS5B01G557300.1	Wheat	vacuole	44.14	45.76
TraesCS6B01G080700.3	Wheat	vacuole	43.02	44.59
TraesCS5B01G557100.1	Wheat	plastid, vacuole	42.86	42.18
KRH08807	Soybean	cytosol, nucleus, vacuole	13.96	40.85
TraesCS2B01G403000.1	Wheat	vacuole	40.45	38.24
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	38.52	35.98
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	38.84	35.8
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.52	35.66
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	38.36	35.51

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0016787	GO:GO:0042742	GO:GO:0050832
GO:GO:0052576	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF18
SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	EnsemblPlantsGene:TraesCS2B01G311900	EnsemblPlants:TraesCS2B01G311900.1	TIGR:cd08996
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:446080294..446083879

Molecular Weight (calculated)

69733.4 Da

IEP (calculated)

9.573

GRAVY (calculated)

-0.280

Length

623 amino acids

Sequence
(BLAST)

001: MTPPWPLLLH RHRSFSTCSS FHRRPLCPRV RAMVVLRGRV AWACPVLVVL LLLQLAGASH VVYETHLLET EAAAADVPPS ILDAELSTGY HFRPIKNWIN
101: DPNAPMYYKG WYHFFYQYNP KGAVWGNIVW AHSVSRDLIN WVALETAIQP SIKSDKYGCW SGSATILRDG TPAIMYTGID RADINYEVQN IAFPKNKSDP
201: LLREWVKPKS NPIIVPEGGI NATQFRDPTT AWYADGHWRL LIGALSGASR GVAYVYRSRD FMRWTRVRKP LHSAPTGMWE CPDLYPVTVD GRQNGLDTSV
301: TSSPKVKHVL KNSLDLRRYD YYTVGTYNRK TERYVPDNPT GDEHHLRYDY GNFYASKTFY DPVKRRRILW GWANESDTAV DDVAKGWAGI QAIPRKVWLD
401: PSGRQLMQWP VEELEALRGK KPVSLRDGVV KRGEHVEVTG LRSSQADVEV SFEVPSLEGA EALDPALAND AQKLCSVKGA DVEGGVGPFG LWVLASAKLE
501: EKTAVFFRVF KAARNINSTK PVVLMCSDPT TSSLNPNLYK PTFAGFVDTD IAKGKISLRS LIDRSVVESF GAGGRTCILS RVYPTLALGK NAHLHVFNNG
601: KVDIKVSQLT AWEMKKPALM NGA

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.