Factsheet for Os04t0413500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

cytosol: 19685898

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10748	Sorghum	vacuole	81.77	82.32
Zm00001d003776_P001	Maize	extracellular	70.4	80.81
Zm00001d025354_P001	Maize	vacuole	79.43	80.1
OQU81520	Sorghum	vacuole	80.43	78.72
OQU81521	Sorghum	vacuole	77.42	77.3
TraesCS2D01G293200.1	Wheat	mitochondrion	79.43	76.61
TraesCS2B01G311900.1	Wheat	nucleus, unclear	78.76	75.6
Os02t0534400-01	Rice	vacuole	72.24	74.87
TraesCS2A01G295400.1	Wheat	unclear	78.93	71.41
GSMUA_Achr6P13160_001	Banana	vacuole	60.37	61.71
HORVU2Hr1G073210.3	Barley	vacuole	28.93	61.35
Os04t0413200-01	Rice	plasma membrane	60.03	61.26
GSMUA_AchrUn_...	Banana	vacuole	55.02	60.37
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	50.84	59.26
PGSC0003DMT400021619	Potato	cytosol	49.67	58.01
GSMUA_Achr4P29900_001	Banana	golgi, vacuole	56.69	57.95
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	49.5	57.81
Solyc10g085360.1.1	Tomato	nucleus	55.35	57.57
PGSC0003DMT400028670	Potato	golgi, vacuole	55.02	57.22
PGSC0003DMT400072606	Potato	cytosol	50.84	56.72
PGSC0003DMT400093309	Potato	cytosol	7.69	56.1
Solyc10g083300.1.1	Tomato	nucleus	55.18	56.03
Solyc09g010090.2.1	Tomato	vacuole	54.35	55.75
Os03t0735800-00	Rice	cytosol	8.19	55.68
Solyc09g010080.2.1	Tomato	vacuole	54.35	55.65
PGSC0003DMT400072608	Potato	extracellular	53.68	55.15
Solyc10g085650.1.1	Tomato	unclear	52.84	54.96
Solyc10g083290.1.1	Tomato	extracellular	53.34	54.81
AT3G52600.1	Thale cress	vacuole	53.85	54.58
CDX79661	Canola	vacuole	53.34	54.07
Bra017257.1-P	Field mustard	cytosol	37.79	54.07
Bra033419.1-P	Field mustard	vacuole	53.51	54.05
CDY23227	Canola	vacuole	53.51	54.05
CDX95352	Canola	vacuole	41.3	54.05
AT2G36190.1	Thale cress	vacuole	53.18	53.81
GSMUA_Achr10P...	Banana	vacuole	13.04	53.79
CDX84575	Canola	vacuole	53.01	53.73
CDY43744	Canola	vacuole	53.01	53.55
Bra023053.1-P	Field mustard	vacuole	52.51	53.49
Solyc10g085640.1.1	Tomato	unclear	49.5	53.14
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	17.89	52.45
Os01t0966700-01	Rice	extracellular, vacuole	48.66	49.32
Os09t0255000-01	Rice	vacuole	48.83	48.99
Os04t0664800-00	Rice	vacuole	47.32	47.48
PGSC0003DMT400097344	Potato	cytosol	11.71	45.16
Os09t0255300-00	Rice	extracellular, vacuole	33.78	44.89
Os04t0664900-01	Rice	cytosol, nucleus, vacuole	23.91	41.21
KRH08807	Soybean	cytosol, nucleus, vacuole	14.38	40.38
Os04t0535600-01	Rice	extracellular, mitochondrion, plasma membrane	41.97	38.26
Os02t0106100-01	Rice	plasma membrane	40.97	37.01

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	EntrezGene:4335790
EMBL:AK072276	EMBL:AY578159	UniProt:B5KNJ4	ProteinID:BAF14662.1	ProteinID:BAS89136.1	ProteinID:CAD40589.2
EMBL:CM000141	InterPro:ConA-like_dom_sf	ProteinID:EEE60968.1	EMBL:EU095553	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004564	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042742	GO:GO:0048046	GO:GO:0050832
GO:GO:0052576	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	EnsemblPlantsGene:Os04g0413500	EnsemblPlants:Os04t0413500-01	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609
PANTHER:PTHR31953	PANTHER:PTHR31953:SF18	UniProt:Q0JDC5	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
SignalP:SignalP-noTM	UniParc:UPI00004F7327	RefSeq:XP_015633534.1	SEG:seg	:	:

Description

GRAIN INCOMPLETE FILLING 1Cell-wall invertase, Carbon partitioning during early grain filling (Os04t0413500-01)

Coordinates

chr4:+:20422171..20426921

Molecular Weight (calculated)

66266.7 Da

IEP (calculated)

9.131

GRAVY (calculated)

-0.319

Length

598 amino acids

Sequence
(BLAST)

001: MGVLGSRVAW AWLVQLLLLQ QLAGASHVVY DDLELQAAAT TADGVPPSIV DSELRTGYHF QPPKNWINDP NAPMYYKGWY HLFYQYNPKG AVWGNIVWAH
101: SVSRDLINWV ALKPAIEPSI RADKYGCWSG SATMMADGTP VIMYTGVNRP DVNYQVQNVA LPRNGSDPLL REWVKPGHNP VIVPEGGINA TQFRDPTTAW
201: RGADGHWRLL VGSLAGQSRG VAYVYRSRDF RRWTRAAQPL HSAPTGMWEC PDFYPVTADG RREGVDTSSA VVDAAASARV KYVLKNSLDL RRYDYYTVGT
301: YDRKAERYVP DDPAGDEHHI RYDYGNFYAS KTFYDPAKRR RILWGWANES DTAADDVAKG WAGIQAIPRK VWLDPSGKQL LQWPIEEVER LRGKWPVILK
401: DRVVKPGEHV EVTGLQTAQA DVEVSFEVGS LEAAERLDPA MAYDAQRLCS ARGADARGGV GPFGLWVLAS AGLEEKTAVF FRVFRPAARG GGAGKPVVLM
501: CTDPTKSSRN PNMYQPTFAG FVDTDITNGK ISLRSLIDRS VVESFGAGGK ACILSRVYPS LAIGKNARLY VFNNGKAEIK VSQLTAWEMK KPVMMNGA

Best Arabidopsis Sequence Match ( AT3G52600.1 )
(BLAST)

001: MSAPKFGYVL LLIVLINISN NGVDAFHKVF KKLQSKSTSL ESVSPLHRTA YHFQPPRHWI NDPNAPMLYK GVYHLFYQYN PKGAVWGNIV WAHSVSKDLI
101: NWEALEPAIY PSKWFDINGT WSGSATHVPG KGPVILYTGI TENQTQIQNY AIPQDLSDPY LKTWIKPDDN PIVKPDNGEN GSAFRDPTTA WFNKKDGYWR
201: MLVGSKRKNR GIAYMYKSRD FKKWVKSKRP IHSRKKTGMW ECPDFFPVSV TDKKNGLDFS YDGPNAKHVL KVSLDLTRYE YYTLGTYDTK KDRYRPDGYT
301: PDGWDGLRFD YGNYYASKTF FDDKTNRRIL WGWANESDTV QDDTVKGWAG IQLIPRTILL DSSGKQLVFW PIEEIESLRG KNVQMTNQKM EMGQRFEVQG
401: ITPAQVDVDV TFNVGNLEKA EKFDESFATK PLELCNLKGS NVNGGVGPFG LITLATSDLE EYTPVFFRVF KDAASNKPKV LMCSDAKPSS LKKDTGTDAK
501: ERMYKPSFAG FVDVGLLDGK ISLRSLIDHS VVESFGAKGK TVITSRVYPT KAVGEKAHLF VFNNGSQPVT VESLNAWNMQ KPLKMNQGAK

Arabidopsis Description

CWINV2Beta-fructofuranosidase, insoluble isoenzyme CWINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.