Factsheet for TraesCS2B01G594900.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G564900.1	Wheat	vacuole	96.11	96.28
TraesCS2A01G588300.1	Wheat	vacuole	95.95	96.11
TraesCS2B01G594600.1	Wheat	cytosol	15.2	90.91
HORVU2Hr1G118790.15	Barley	vacuole	90.03	90.03
HORVU2Hr1G118820.1	Barley	cytosol	80.57	89.83
TraesCS2B01G594700.1	Wheat	vacuole	84.97	85.25
TraesCS2B01G595000.1	Wheat	vacuole	71.79	80.49
TraesCS2B01G516800.1	Wheat	vacuole	71.96	72.08
TraesCS2B01G516700.2	Wheat	vacuole	71.28	71.04
Os09t0255000-01	Rice	vacuole	69.93	69.46
Zm00001d001941_P001	Maize	extracellular	61.66	66.61
Os09t0255300-00	Rice	extracellular, vacuole	50.17	66.0
KXG27359	Sorghum	plastid	68.24	64.64
TraesCS2B01G516300.1	Wheat	peroxisome	58.78	63.74
TraesCS2B01G516900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	57.26	61.3
TraesCS3B01G028200.1	Wheat	cytosol	8.45	49.02
TraesCS1B01G422700.1	Wheat	vacuole	47.3	48.95
TraesCS5B01G557400.1	Wheat	cytosol, peroxisome, vacuole	42.57	48.46
TraesCS4B01G356800.1	Wheat	vacuole	47.47	48.36
TraesCS3B01G584500.1	Wheat	vacuole	47.3	48.36
TraesCS6B01G080800.1	Wheat	cytosol, nucleus, vacuole	44.09	48.07
TraesCS5B01G556600.1	Wheat	vacuole	47.13	47.77
TraesCS4B01G066000.1	Wheat	vacuole	46.79	47.59
TraesCS5B01G557300.1	Wheat	vacuole	47.64	46.92
TraesCS4B01G066200.1	Wheat	cytosol	8.11	46.15
TraesCS5B01G556700.1	Wheat	vacuole	45.44	45.83
TraesCS3B01G028500.1	Wheat	vacuole	44.93	45.63
TraesCS6B01G080700.3	Wheat	vacuole	46.28	45.59
TraesCS2B01G311900.1	Wheat	nucleus, unclear	47.97	45.59
TraesCS3B01G054100.1	Wheat	cytosol	7.77	45.1
TraesCS5B01G557100.1	Wheat	plastid, vacuole	45.78	42.81
TraesCS3B01G028100.1	Wheat	vacuole	24.83	38.79
TraesCS2B01G403000.1	Wheat	vacuole	38.18	34.29
TraesCS6B01G031700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	38.34	33.73
TraesCS6B01G031300.1	Wheat	peroxisome, plastid, vacuole	38.18	33.58
TraesCS6B01G031600.1	Wheat	peroxisome, plastid, vacuole	37.33	33.13
TraesCS6B01G031500.1	Wheat	extracellular, peroxisome, vacuole	37.5	32.84

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244
PANTHER:PTHR31953	PANTHER:PTHR31953:SF13	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS2B01G594900	EnsemblPlants:TraesCS2B01G594900.1	TIGR:cd08996	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:779251351..779255798

Molecular Weight (calculated)

65701.8 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.276

Length

592 amino acids

Sequence
(BLAST)

001: MAARLPLAAC IVAFHLCLLL LQSSALRRLS EAAESSLVRH GVGMRPAYHF LPAKNWQNDP NGPMYHNGVY HMFYQYNPLG AMWQPGNLSW GHSVSRDLVN
101: WDALDTALDP TAPFDYNGCW SGSATILPDG IPALLYTGRI EGDKEVQVQN VAFPKNPADP LLREWVKPAY NPVIPLPADV PGDSFRDPTT AWVGRDGLWR
201: IAVAAKVGGP NGIASTLIYR SKDFRNWKRN ALPLYTSRAA GMVECPDLFP VAELGVEEGR LGYASGPASS AVRHVLKLSV MNTTQDYYAV GRYDDVADTF
301: VPEVDVERNA DDCRTWRRFD YGHVYASKSF FDSSKNRRVL WAWANESDSQ DNDIARGWSG VQTVPRKVWL DEDSKQVRQW PIEEIETLRS KRVVGLLGAQ
401: VNAGGVNKIV GVGAQADVEA IFEIPSLEEA ETFQPNWLLD PQKLCEENGA SVPGRVGPFG LLVMASSNLQ EHTAIFFRVF RHNQKYKVLM CTDLTRSSGR
501: DNVYKPSYGG FVDIDIEKQG RSISLRTLID HSVVESFGGG GRTCITARVY PEHAENKNSH VFVFNNGSRL VKVSKLEAWR LAMASVNVVH GG

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.