Factsheet for TraesCS4D01G350500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G526200.1	Wheat	plastid	97.59	97.59
TraesCS4B01G356800.1	Wheat	vacuole	97.42	97.42
HORVU4Hr1G086300.2	Barley	plastid, vacuole	96.56	91.97
Os02t0534400-01	Rice	vacuole	80.38	80.94
KXG30339	Sorghum	vacuole	80.21	80.21
Zm00001d016708_P002	Maize	extracellular	76.59	75.81
TraesCS1D01G402500.1	Wheat	vacuole	70.05	71.53
TraesCS2D01G293200.1	Wheat	mitochondrion	71.94	67.42
TraesCS3D01G015900.1	Wheat	cytosol	59.04	63.52
GSMUA_Achr6P13160_001	Banana	vacuole	63.68	63.25
TraesCS5D01G552900.1	Wheat	vacuole	60.76	60.45
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	52.84	59.96
TraesCS4D01G065000.1	Wheat	vacuole	59.72	59.72
GSMUA_AchrUn_...	Banana	vacuole	55.77	59.45
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	52.15	59.06
PGSC0003DMT400093309	Potato	cytosol	8.26	58.54
Solyc10g085360.1.1	Tomato	nucleus	57.83	58.43
GSMUA_Achr4P29900_001	Banana	golgi, vacuole	58.69	58.29
PGSC0003DMT400021619	Potato	cytosol	50.77	57.62
PGSC0003DMT400072606	Potato	cytosol	52.67	57.09
PGSC0003DMT400028670	Potato	golgi, vacuole	56.45	57.04
PGSC0003DMT400072608	Potato	extracellular	56.8	56.7
AT3G52600.1	Thale cress	vacuole	57.49	56.61
Solyc09g010090.2.1	Tomato	vacuole	56.63	56.43
Solyc10g083290.1.1	Tomato	extracellular	56.45	56.36
CDX95352	Canola	vacuole	44.23	56.24
Bra033419.1-P	Field mustard	vacuole	57.14	56.08
CDY23227	Canola	vacuole	57.14	56.08
Solyc10g083300.1.1	Tomato	nucleus	56.8	56.03
Bra017257.1-P	Field mustard	cytosol	39.93	55.5
Solyc09g010080.2.1	Tomato	vacuole	55.59	55.31
CDY43744	Canola	vacuole	56.28	55.24
CDX84575	Canola	vacuole	55.94	55.08
CDX79661	Canola	vacuole	55.94	55.08
Bra023053.1-P	Field mustard	vacuole	55.42	54.86
Solyc10g085650.1.1	Tomato	unclear	54.22	54.78
AT2G36190.1	Thale cress	vacuole	55.59	54.65
Solyc10g085640.1.1	Tomato	unclear	50.95	53.14
VIT_00s2527g00010.t01	Wine grape	cytosol, peroxisome, vacuole	18.42	52.45
GSMUA_Achr10P...	Banana	vacuole	13.08	52.41
TraesCS3D01G524600.1	Wheat	vacuole	49.91	50.26
TraesCS2D01G489200.2	Wheat	vacuole	50.43	49.66
TraesCS6D01G066800.1	Wheat	vacuole	49.23	48.47
TraesCS6D01G064100.1	Wheat	cytosol	38.04	48.46
TraesCS2D01G564900.1	Wheat	vacuole	48.54	47.72
TraesCS2D01G565000.1	Wheat	vacuole	47.68	47.59
TraesCS5D01G551900.1	Wheat	vacuole	48.71	47.56
TraesCS6D01G064400.1	Wheat	vacuole	47.85	46.64
PGSC0003DMT400097344	Potato	cytosol	12.39	46.45
TraesCS2D01G489400.1	Wheat	cytosol	44.06	46.29
TraesCS4D01G065200.1	Wheat	cytosol	8.26	46.15
TraesCS5D01G553000.1	Wheat	endoplasmic reticulum, golgi, vacuole	46.82	46.1
TraesCS6D01G064200.1	Wheat	vacuole	48.19	45.9
TraesCS6D01G064300.1	Wheat	vacuole	48.19	45.53
TraesCS5D01G552000.1	Wheat	unclear	46.3	45.13
TraesCS2D01G489300.1	Wheat	cytosol	29.6	43.65
TraesCS7D01G009300.1	Wheat	mitochondrion	34.6	39.49
TraesCS2D01G382600.2	Wheat	vacuole	42.69	37.41
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	41.31	36.47
KRH08807	Soybean	cytosol, nucleus, vacuole	13.25	36.15
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	40.96	35.21
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	40.62	35.12
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	40.28	34.87
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	40.62	34.81
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	37.18	34.78
TraesCS7D01G008900.1	Wheat	vacuole	38.55	34.57
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	37.35	33.7
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	37.01	33.44
TraesCS7D01G055000.1	Wheat	plastid	36.83	33.28
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	39.59	32.81
TraesCS7D01G008700.1	Wheat	vacuole	37.01	32.48
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	37.35	32.44
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	39.07	30.03

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609	PANTHER:PTHR31953	PANTHER:PTHR31953:SF18
SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4D01G350500	EnsemblPlants:TraesCS4D01G350500.1
TIGR:cd08996	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:502708459..502711974

Molecular Weight (calculated)

64581.0 Da

IEP (calculated)

8.956

GRAVY (calculated)

-0.309

Length

581 amino acids

Sequence
(BLAST)

001: MGAPKWVVAP LALLLLLQLA GASHDVRRSL EAEAATPSVP ASILSPLLRT GYHFQPPMNW INDPNGPLYY KGWYHLFYQY NPKGAVWGNI IWAHSVSRDL
101: INWMALDPAI KPSIPTDQYG VWSGSATILP NGTVAMLYTG IDRPGTNYQI QNIAFPKDPS DPLLREWVKP GYNPIAVPEA GINATQFRDP TTAWHAGDGL
201: WRMLVGGLKP GTLRGMAILY RSRDFKHWVR AKHPLHSALT GMWECPDFFP VREPGKTDGL DTSEFGPRYK YVLKNSLDLT RYDYYTVGTY NNRTERYVPD
301: NPTGDVYQRL QYDYGNFYAS KTFYDPAKNR RVLLGWANES DSVAHDNAKG WAGIHAIPRK IWLDPSGKQL LQWPVEELDQ LRGKAVSVGD KLVKPGQHFE
401: VTGLQSYQSD VEVSFEVSSL DKAEPFDPAY ANDAQKLCGM KNADVKGGVG PFGLWVLASD NLAEKTAVFF RVFKDGHGKP LVLMCSDPTK SSLTPGLYKP
501: TFAGFVDTDI SSGKISLRSL IDRSVVESFG AGGKTCILSR VYPSMAIGKD AHLYVFNNGV TDIKVSKLTA WEMKKPMMNG A

Best Arabidopsis Sequence Match ( AT2G36190.1 )
(BLAST)

001: MAISNVISVL LLLLVLINLS NQNIKGIDAF HQIYEELQSE SVESVNHLHR PSFHFQPPKH WINDPNGPVY YKGLYHLFYQ YNTKGAVWGN IIWAHSVSKD
101: LVNWEALEPA LSPSKWFDIG GTWSGSITIV PGKGPIILYT GVNQNETQLQ NYAIPEDPSD PYLRKWIKPD DNPIAIPDYT MNGSAFRDPT TAWFSKDGHW
201: RTVVGSKRKR RGIAYIYRSR DFKHWVKAKH PVHSKQSTGM WECPDFFPVS LTDFRNGLDL DYVGPNTKHV LKVSLDITRY EYYTLGKYDL KKDRYIPDGN
301: TPDGWEGLRF DYGNFYASKT FFDYKKNRRI LWGWANESDT VEDDILKGWA GLQVIPRTVL LDSSKKQLVF WPVEEIESLR GNYVRMNNHD IKMGQRIEVK
401: GITPAQADVE VTFYVGSLEK AEIFDPSFTW KPLELCNIKG SNVRGGVGPF GLITLATPDL EEYTPVFFRV FNDTKTHKPK VLMCSDARPS SLKQDTGLLA
501: KDRMYKPSFA GFVDVDMADG RISLRSLIDH SVVESFGALG KTVITSRVYP VKAVKENAHL YVFNNGTQTV TIESLNAWNM DRPLQMNDGA L

Arabidopsis Description

CWINV4Beta-fructofuranosidase, insoluble isoenzyme CWINV4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W413]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.