Factsheet for TraesCS5D01G552000.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G557100.1	Wheat	plastid, vacuole	96.14	90.52
HORVU5Hr1G123970.5	Barley	plastid	83.22	84.5
TraesCS5D01G553000.1	Wheat	endoplasmic reticulum, golgi, vacuole	83.05	83.9
TraesCS4A01G321600.1	Wheat	vacuole	85.07	77.17
TraesCS3D01G524600.1	Wheat	vacuole	74.33	76.78
TraesCS5D01G551900.1	Wheat	vacuole	76.34	76.47
Os01t0966700-01	Rice	extracellular, vacuole	73.99	74.75
TraesCS6D01G064100.1	Wheat	cytosol	56.71	74.12
TraesCS6D01G064200.1	Wheat	vacuole	71.14	69.51
TraesCS6D01G064400.1	Wheat	vacuole	69.46	69.46
TraesCS6D01G064300.1	Wheat	vacuole	70.97	68.78
OQU88249	Sorghum	plastid, vacuole	72.15	68.15
TraesCS6D01G066800.1	Wheat	vacuole	65.44	66.1
Zm00001d041991_P001	Maize	extracellular	68.62	65.97
GSMUA_Achr6P13170_001	Banana	vacuole	53.02	53.83
TraesCS2D01G489400.1	Wheat	cytosol	43.96	47.38
TraesCS2D01G489200.2	Wheat	vacuole	46.31	46.78
TraesCS4D01G350500.1	Wheat	plastid	45.13	46.3
TraesCS1D01G402500.1	Wheat	vacuole	44.13	46.22
TraesCS2D01G565000.1	Wheat	vacuole	44.8	45.88
TraesCS2D01G564900.1	Wheat	vacuole	45.13	45.52
TraesCS4D01G065000.1	Wheat	vacuole	44.3	45.44
VIT_06s0004g08000.t01	Wine grape	vacuole	14.26	44.5
TraesCS3D01G015900.1	Wheat	cytosol	40.27	44.44
TraesCS5D01G552900.1	Wheat	vacuole	43.46	44.35
Solyc08g045720.1.1	Tomato	extracellular	10.91	44.22
TraesCS2D01G293200.1	Wheat	mitochondrion	44.46	42.74
TraesCS2D01G489300.1	Wheat	cytosol	26.68	40.36
TraesCS4D01G065200.1	Wheat	cytosol	6.88	39.42
TraesCS7D01G009300.1	Wheat	mitochondrion	30.37	35.56
TraesCS2D01G382600.2	Wheat	vacuole	37.42	33.63
TraesCS7D01G008900.1	Wheat	vacuole	35.57	32.72
TraesCS7D01G009400.2	Wheat	cytosol, plastid, vacuole	33.56	32.21
TraesCS7D01G010000.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	35.4	32.07
TraesCS6D01G026400.1	Wheat	peroxisome, plastid, vacuole	35.91	31.85
TraesCS6D01G026500.2	Wheat	peroxisome, plastid, vacuole	36.07	31.71
TraesCS6D01G026600.2	Wheat	endoplasmic reticulum, peroxisome, vacuole	35.57	31.59
TraesCS7D01G009700.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	33.56	31.1
TraesCS6D01G026300.2	Wheat	peroxisome, plastid, vacuole	35.23	31.07
TraesCS7D01G008700.1	Wheat	vacuole	34.4	30.97
TraesCS7D01G055000.1	Wheat	plastid	33.22	30.79
TraesCS7D01G008800.2	Wheat	cytosol, plastid, vacuole	32.72	30.28
TraesCS7D01G054800.3	Wheat	mitochondrion, vacuole	35.07	29.81
TraesCS7D01G009100.1	Wheat	cytosol, mitochondrion, peroxisome, vacuole	33.22	29.6
TraesCS7D01G009200.2	Wheat	cytosol, mitochondrion, plasma membrane, plastid, vacuole	35.23	27.78

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	PFAM:PF08244
PANTHER:PTHR31953	PANTHER:PTHR31953:SF9	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G552000	EnsemblPlants:TraesCS5D01G552000.1	TIGR:cd08996	:	:	:

Description

No Description!

Coordinates

chr5D:-:557543944..557547606

Molecular Weight (calculated)

66843.9 Da

IEP (calculated)

4.862

GRAVY (calculated)

-0.239

Length

596 amino acids

Sequence
(BLAST)

001: MLLLSTCSCF MSVFTASWLG GLACIFSTSL LFQILVRPCS NGGGLFFCPQ SPNAPSILSS KDRTAYHFQP PKNWINDPCG PMYYNGIYHE FYQYNPDGSF
101: NPNTSYNIVW GHSVSTDLVN WITLEPAIEP DTPNDIKGCW SGSATIVSGD QPVIIYTGVI DIEKHQVQNI ALPKNRSDPY LREWTKAGNN PVIQSGVPGL
201: NSGQFRDPTT GWIGPDGLWR IAVGAQLNGY GAALLYKSED FLNWTRVDHP LYSSNASIMF ECLDFFAVLP GSNNGLDMSS AIPNGAKHVL KMGMNFGEDV
301: YVIGVYDLKR DAFVPDTDDS RLWPRIDYGN FYASKTFFDS KHGRRIIWAW TTETDSSSDD IAKGWAGIYS FPRTIWLDND GKRLLQWPVE EIESLRINEI
401: NHQELELKKG DLFEIKGIDT LQADVEIDFE LTSIDDADPF NPSWLFDTEK HCREADASVH GGIGPFGLVI LASDNMEEQT VVHFRVYRSQ KNYMILMCSD
501: LRRSSLTPGL DTPAYGGFFE FDLEKERKIS LRTLIDRSAV ESFGGGGRVC IMARVYPVSL VDDDHQPHMY AFNNGSATVR VPHLMAWSMR RAQVSV

Best Arabidopsis Sequence Match ( AT1G55120.1 )
(BLAST)

001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.