CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
vacuole 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400093309	Potato	cytosol	15.65	59.76
KRG89524	Soybean	cytosol	74.12	55.24
KRG89527	Soybean	vacuole	92.01	51.89
KRG89530	Soybean	vacuole	71.89	48.6
KRG96203	Soybean	vacuole	78.27	44.22
Bra017257.1-P	Field mustard	cytosol	56.87	42.58
KRH67945	Soybean	vacuole	68.69	40.26
PGSC0003DMT400097344	Potato	cytosol	19.17	38.71
KRH32774	Soybean	endoplasmic reticulum, vacuole	69.01	37.5
PGSC0003DMT400023090	Potato	cytosol, extracellular, mitochondrion, vacuole	61.02	37.3
PGSC0003DMT400021619	Potato	cytosol	59.74	36.52
PGSC0003DMT400023091	Potato	cytosol, mitochondrion, plastid, vacuole	58.15	35.48
PGSC0003DMT400072606	Potato	cytosol	59.42	34.7
Solyc10g085360.1.1	Tomato	nucleus	61.02	33.22
VIT_08s0007g03060.t01	Wine grape	vacuole	60.38	33.22
Solyc09g010090.2.1	Tomato	vacuole	61.02	32.76
PGSC0003DMT400072608	Potato	extracellular	60.7	32.65
PGSC0003DMT400028670	Potato	golgi, vacuole	59.74	32.52
Solyc10g085640.1.1	Tomato	unclear	57.83	32.5
Solyc10g083290.1.1	Tomato	extracellular	60.38	32.47
CDX79661	Canola	vacuole	61.02	32.37
Bra023053.1-P	Field mustard	vacuole	60.38	32.2
AT3G52600.1	Thale cress	vacuole	60.38	32.03
CDX84575	Canola	vacuole	60.38	32.03
CDY23227	Canola	vacuole	59.74	31.59
Bra033419.1-P	Field mustard	vacuole	59.74	31.59
Solyc09g010080.2.1	Tomato	vacuole	58.79	31.51
AT2G36190.1	Thale cress	vacuole	59.11	31.3
CDY43744	Canola	vacuole	59.11	31.25
Solyc10g085650.1.1	Tomato	unclear	57.19	31.13
Solyc10g083300.1.1	Tomato	nucleus	58.47	31.07
KRH44130	Soybean	vacuole	51.44	28.55
KRH47104	Soybean	nucleus	51.12	28.37
KRH23303	Soybean	nucleus	50.16	27.35
KRH10019	Soybean	nucleus, vacuole	49.84	27.13
KRH44129	Soybean	vacuole	42.81	26.07
CDX95352	Canola	vacuole	36.1	24.73
KRH05441	Soybean	cytosol	42.81	24.28
KRH05439	Soybean	cytosol	42.81	23.84
KRH15564	Soybean	mitochondrion	16.61	23.53
HORVU3Hr1G097050.5	Barley	mitochondrion, vacuole	11.5	23.38
KRH15569	Soybean	vacuole	42.81	23.26
KRH23803	Soybean	vacuole	39.62	20.2
KRH15559	Soybean	cytosol	22.68	20.11
KRH39981	Soybean	vacuole	38.66	19.21
KRH57351	Soybean	endoplasmic reticulum	39.3	19.07
KRH77397	Soybean	endoplasmic reticulum	40.89	18.96
KRH04082	Soybean	endoplasmic reticulum	38.98	18.91
KRH56348	Soybean	vacuole	38.66	18.73
KRH08807	Soybean	cytosol, nucleus, vacuole	11.82	17.37
KRH28036	Soybean	vacuole	34.19	17.29

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:50.3.2	EMBL:ACUP02012214	InterPro:ConA-like_dom_sf	EnsemblPlantsGene:GLYMA_20G028600
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf
InterPro:IPR023296	UniProt:K7N118	EnsemblPlants:KRG89522	ProteinID:KRG89522	ProteinID:KRG89522.1	PFAM:PF00251
PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF33	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
UniParc:UPI000296790C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:3389436..3393411

Molecular Weight (calculated)

35420.4 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.304

Length

313 amino acids

Sequence
(BLAST)

001: MTHFWVKPDK LNPVVVDKDV NNTEFRDPTA AWWGKDGHWR MLVGSVRKRR GIAYLYGSKD FMTWVRAKHP IHSKGGTGMW ECPNFYPVSV IGNVVVNIVK
101: YVLKNNLDDT KFDYYNVGTY MEDKDRYVPD NTSVDGWGGL SLRGKEVNID NQRLEKRDYS EVKGITAAQA DVERWGSKLQ GGVGPFGLLT LATQNLEEFT
201: PVFFRVFKSP NKHIVLLCSD ARSSSLKSDL YKPQFAVFVD VDLTVDKKIS LRSLIDHSVV ESFGAGGKTN ILSRVYPELA VMNQAHLFVF NNGTEPIVVQ
301: NLKAWSMIST DIK

Best Arabidopsis Sequence Match ( AT1G55120.4 )
(BLAST)

001: MKSNSTNKNK NPDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ
101: NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF
201: PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK
301: GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG
401: PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL
501: AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF

Arabidopsis Description

CWINV3Beta-fructofuranosidase, insoluble isoenzyme CWINV3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XZ3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.