Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13622 | Soybean | cytosol | 68.04 | 87.13 |
| KRH13625 | Soybean | cytosol | 81.28 | 81.28 |
| KRH43845 | Soybean | cytosol | 79.91 | 78.83 |
| KRH13617 | Soybean | cytosol, nucleus | 69.41 | 69.41 |
| KRH43848 | Soybean | cytosol | 68.49 | 68.49 |
| KRG98126 | Soybean | cytosol | 30.59 | 67.68 |
| CDX79261 | Canola | cytosol | 67.58 | 67.58 |
| Bra003644.1-P | Field mustard | cytosol | 67.58 | 67.58 |
| CDY26861 | Canola | cytosol | 67.58 | 67.58 |
| CDX68016 | Canola | cytosol | 67.58 | 67.58 |
| Solyc07g056490.2.1 | Tomato | extracellular | 66.67 | 66.67 |
| AT1G78380.1 | Thale cress | cytosol | 66.21 | 66.21 |
| CDY14615 | Canola | cytosol | 66.21 | 66.21 |
| KRH13616 | Soybean | cytosol | 65.3 | 66.2 |
| PGSC0003DMT400038054 | Potato | endoplasmic reticulum | 65.3 | 65.3 |
| Solyc12g011310.1.1 | Tomato | plastid | 64.38 | 64.38 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 27.85 | 64.21 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 35.16 | 63.64 |
| PGSC0003DMT400071059 | Potato | cytosol | 63.47 | 63.18 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 63.47 | 62.9 |
| AT1G78370.1 | Thale cress | cytosol | 62.1 | 62.67 |
| AT1G17180.1 | Thale cress | cytosol | 63.01 | 62.44 |
| AT1G78340.1 | Thale cress | cytosol | 61.64 | 61.93 |
| AT1G78360.1 | Thale cress | endoplasmic reticulum | 62.1 | 61.82 |
| Bra003645.1-P | Field mustard | cytosol | 57.53 | 61.76 |
| CDX68017 | Canola | cytosol | 61.19 | 61.75 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 62.1 | 61.54 |
| AT1G17170.1 | Thale cress | cytosol | 61.19 | 61.47 |
| KRH02498 | Soybean | cytosol | 61.19 | 61.47 |
| CDX68018 | Canola | cytosol | 61.19 | 61.47 |
| CDX79260 | Canola | cytosol | 60.73 | 61.29 |
| Bra003646.1-P | Field mustard | cytosol | 60.73 | 61.01 |
| Bra035031.1-P | Field mustard | cytosol | 61.19 | 60.91 |
| CDX87452 | Canola | cytosol | 61.19 | 60.91 |
| Bra026684.1-P | Field mustard | cytosol | 60.73 | 60.73 |
| CDX79259 | Canola | cytosol | 60.73 | 60.73 |
| CDY21758 | Canola | cytosol | 60.73 | 60.73 |
| KRH13620 | Soybean | cytosol | 61.19 | 60.63 |
| Bra025995.1-P | Field mustard | cytosol | 59.36 | 60.47 |
| Bra026681.1-P | Field mustard | cytosol | 60.27 | 60.27 |
| CDY26267 | Canola | cytosol | 58.9 | 60.0 |
| Bra025994.1-P | Field mustard | cytosol | 59.82 | 59.82 |
| CDX81808 | Canola | cytosol | 59.82 | 59.82 |
| CDY26266 | Canola | cytosol | 59.82 | 59.82 |
| CDX88438 | Canola | cytosol | 59.36 | 59.63 |
| Bra035029.1-P | Field mustard | cytosol | 59.36 | 59.63 |
| CDX88439 | Canola | cytosol | 59.36 | 59.63 |
| CDX81810 | Canola | cytosol | 59.36 | 59.36 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 59.82 | 59.28 |
| CDX81807 | Canola | cytosol | 58.9 | 59.17 |
| CDX88440 | Canola | cytosol | 59.36 | 59.09 |
| CDY48476 | Canola | cytosol | 58.9 | 58.9 |
| Bra026680.1-P | Field mustard | cytosol | 58.9 | 58.9 |
| CDY48475 | Canola | cytosol | 45.21 | 58.58 |
| CDX83922 | Canola | cytosol | 57.99 | 57.99 |
| Bra016615.1-P | Field mustard | cytosol | 57.99 | 57.99 |
| CDY21757 | Canola | cytosol | 57.99 | 57.99 |
| CDX96787 | Canola | cytosol | 57.99 | 57.99 |
| CDX88441 | Canola | cytosol | 58.45 | 57.92 |
| AT1G17190.1 | Thale cress | cytosol | 57.99 | 57.73 |
| CDX81809 | Canola | cytosol | 57.08 | 57.08 |
| KRH30655 | Soybean | cytosol | 57.53 | 57.01 |
| KRH43846 | Soybean | cytosol | 52.97 | 56.86 |
| CDY21756 | Canola | cytosol | 56.16 | 56.16 |
| Bra025993.1-P | Field mustard | cytosol | 56.16 | 55.91 |
| KRH13619 | Soybean | cytosol | 55.71 | 55.71 |
| Bra026679.1-P | Field mustard | cytosol | 55.71 | 55.71 |
| KRH43847 | Soybean | cytosol | 51.6 | 54.59 |
| CDY48477 | Canola | cytosol | 47.03 | 53.93 |
| KRH17272 | Soybean | cytosol | 53.88 | 53.39 |
| KRH72918 | Soybean | cytosol | 53.88 | 53.39 |
| KRH13618 | Soybean | extracellular | 53.42 | 53.18 |
| KRH43842 | Soybean | cytosol | 36.07 | 51.3 |
| Bra034977.1-P | Field mustard | cytosol | 52.97 | 51.1 |
| AT3G43800.1 | Thale cress | cytosol | 52.97 | 51.1 |
| CDY12324 | Canola | cytosol | 52.97 | 51.1 |
| CDX87952 | Canola | cytosol | 52.97 | 51.1 |
| Bra003648.1-P | Field mustard | cytosol | 31.05 | 45.64 |
| KRG99195 | Soybean | cytosol | 26.94 | 41.55 |
| KRH69403 | Soybean | extracellular | 25.11 | 41.04 |
| KRH69404 | Soybean | nucleus | 42.01 | 39.66 |
| KRH69402 | Soybean | nucleus | 42.01 | 39.66 |
| KRH74742 | Soybean | nucleus | 42.01 | 39.32 |
| KRH74740 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.55 | 38.72 |
| CDX68020 | Canola | cytosol | 5.02 | 30.56 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EntrezGene:547950 | EMBL:ACUP02004898 | EMBL:BT094624 |
| UniProt:C6TAT2 | EnsemblPlantsGene:GLYMA_08G174700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006749 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0019748 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| EMBL:KM818452 | EnsemblPlants:KRH43843 | ProteinID:KRH43843 | ProteinID:KRH43843.1 | PFAM:PF02798 | PFAM:PF13410 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF479 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI000189D704 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:13956891..13958832
Molecular Weight (calculated)
25654.8 Da
IEP (calculated)
5.456
GRAVY (calculated)
-0.371
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGVVLLDT WASMFGMRVR IALAEKGVEY EYKEENLRNK SPLLLQMNPI HKKIPVLIHN GKPICESAII VQYIDEVWND KAPILPSDPY ERAQARFWVD
101: YIDKKVYDTW RKMWLSKGEE HEAGKKEFIS IFKQLEETLS DKAYYGSDTF GFLDIGLIPF YSWFYTFETY GNFKMEEECP KLVAWAKRCM QREAVSKSLP
201: DEKKVYDYVV AVTKVLESN
101: YIDKKVYDTW RKMWLSKGEE HEAGKKEFIS IFKQLEETLS DKAYYGSDTF GFLDIGLIPF YSWFYTFETY GNFKMEEECP KLVAWAKRCM QREAVSKSLP
201: DEKKVYDYVV AVTKVLESN
001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE
Arabidopsis Description
GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.