Factsheet for Bra026680.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra039980.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17180.1	Bra039980.1-P	AT2G29420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21757	Canola	cytosol	97.72	97.72
CDX81809	Canola	cytosol	93.61	93.61
Bra026679.1-P	Field mustard	cytosol	87.67	87.67
Bra026684.1-P	Field mustard	cytosol	84.47	84.47
Bra026681.1-P	Field mustard	cytosol	84.02	84.02
Bra025994.1-P	Field mustard	cytosol	81.28	81.28
AT1G17180.1	Thale cress	cytosol	79.45	78.73
Bra025995.1-P	Field mustard	cytosol	70.78	72.09
Bra003644.1-P	Field mustard	cytosol	70.78	70.78
Bra008357.1-P	Field mustard	cytosol	35.16	67.54
Bra035031.1-P	Field mustard	cytosol	66.21	65.91
Bra003646.1-P	Field mustard	cytosol	63.93	64.22
Bra003647.1-P	Field mustard	cytosol	63.93	63.64
Bra016615.1-P	Field mustard	cytosol	62.1	62.1
Solyc12g011310.1.1	Tomato	plastid	61.64	61.64
Bra035029.1-P	Field mustard	cytosol	61.19	61.47
Bra003645.1-P	Field mustard	cytosol	57.08	61.27
Solyc07g056490.2.1	Tomato	extracellular	60.73	60.73
PGSC0003DMT400038054	Potato	endoplasmic reticulum	59.82	59.82
KRH13622	Soybean	cytosol	46.58	59.65
Bra025993.1-P	Field mustard	cytosol	59.82	59.55
KRH43843	Soybean	cytosol	58.9	58.9
VIT_19s0093g00350.t01	Wine grape	cytosol	59.36	58.82
VIT_19s0093g00400.t01	Wine grape	cytosol	59.36	58.82
Bra038140.1-P	Field mustard	cytosol	59.82	58.48
VIT_19s0093g00370.t01	Wine grape	cytosol	31.96	57.85
VIT_19s0093g00320.t01	Wine grape	cytosol	57.99	57.47
KRH02498	Soybean	cytosol	57.08	57.34
PGSC0003DMT400071059	Potato	cytosol	57.53	57.27
KRH43845	Soybean	cytosol	56.62	55.86
VIT_10s0003g04250.t01	Wine grape	cytosol	24.2	55.79
KRH13620	Soybean	cytosol	55.71	55.2
KRH13625	Soybean	cytosol	53.88	53.88
KRH43846	Soybean	cytosol	49.77	53.43
Bra003648.1-P	Field mustard	cytosol	35.16	51.68
Bra034977.1-P	Field mustard	cytosol	52.97	51.1
Bra027840.1-P	Field mustard	cytosol	41.55	38.89
Bra031708.1-P	Field mustard	cytosol	37.9	36.56
Bra019940.1-P	Field mustard	cytosol	37.9	36.56
Bra007889.1-P	Field mustard	mitochondrion	33.79	35.58
Bra007890.1-P	Field mustard	cytosol	36.99	35.22
Bra003970.1-P	Field mustard	cytosol	37.44	35.04
Bra016250.1-P	Field mustard	cytosol	36.99	34.62
Bra024659.1-P	Field mustard	cytosol	35.62	34.36
Bra016252.1-P	Field mustard	cytosol	35.62	33.91
Bra016253.1-P	Field mustard	cytosol	35.16	33.77
Bra012422.1-P	Field mustard	cytosol	27.4	30.3
Bra027842.1-P	Field mustard	cytosol	20.55	29.22

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra026680	EnsemblPlants:Bra026680.1	EnsemblPlants:Bra026680.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4ED20	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002542BBF	SEG:seg	:	:	:	:

Description

AT1G17180 (E=7e-097) ATGSTU25 | ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase

Coordinates

chrA09:-:33188238..33188975

Molecular Weight (calculated)

25034.4 Da

IEP (calculated)

5.487

GRAVY (calculated)

-0.287

Length

219 amino acids

Sequence
(BLAST)

001: MADEVILLGY WPSTFGVRTR IALEEKDIKF GYREQDLFNK SALLLEMNPV HKKIPVLIHN GKPVCESLIQ VEYIDETWAG KNPLLPSDPY QRAQAKFWGD
101: FIDKMVPGVV RLMWGAKGEE QEAGKKEFVE MLKTVESELG DKTYFGGEAF GYVDIALIGY YCWFDAFEKY GNFSIKAECP KIIAWAKRCM KRDSVAKSLP
201: DSEKVTELVP ELKKKMGIE

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.