Factsheet for Bra016253.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38773	Canola	cytosol	99.56	99.56
CDY11637	Canola	mitochondrion	98.68	98.68
Bra007889.1-P	Field mustard	mitochondrion	71.49	78.37
Bra016252.1-P	Field mustard	cytosol	78.95	78.26
Bra024659.1-P	Field mustard	cytosol	74.56	74.89
Bra012422.1-P	Field mustard	cytosol	59.65	68.69
Bra003970.1-P	Field mustard	cytosol	51.32	50.0
Bra016250.1-P	Field mustard	cytosol	50.88	49.57
Bra007890.1-P	Field mustard	cytosol	49.56	49.13
Bra031708.1-P	Field mustard	cytosol	45.18	45.37
Bra019940.1-P	Field mustard	cytosol	44.74	44.93
KRH74742	Soybean	nucleus	46.05	44.87
KRH69403	Soybean	extracellular	26.32	44.78
GSMUA_Achr1P03800_001	Banana	cytosol	43.86	44.05
Bra027840.1-P	Field mustard	cytosol	45.18	44.02
KRH74740	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.74	43.4
KRH69402	Soybean	nucleus	43.42	42.67
Os10t0525800-00	Rice	cytosol	40.79	42.66
Os10t0525500-01	Rice	cytosol, plastid	26.75	42.36
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.23	41.78
GSMUA_Achr5P10340_001	Banana	cytosol	42.11	41.38
Os10t0481300-01	Rice	cytosol	36.84	41.18
EER92034	Sorghum	endoplasmic reticulum	41.67	40.95
EER92036	Sorghum	cytosol	42.11	40.85
GSMUA_Achr5P10360_001	Banana	cytosol	42.54	40.59
TraesCS5D01G200100.1	Wheat	cytosol	40.79	40.26
Os10t0525400-01	Rice	cytosol, plastid	42.98	40.16
TraesCS1B01G194900.1	Wheat	cytosol	41.67	40.08
Bra003646.1-P	Field mustard	cytosol	38.16	39.91
TraesCS5A01G190900.1	Wheat	cytosol	40.35	39.83
TraesCS5B01G192400.1	Wheat	cytosol	40.35	39.83
TraesCS1D01G189600.1	Wheat	cytosol	41.23	39.66
TraesCS1A01G187000.1	Wheat	cytosol	40.79	39.24
KRH69404	Soybean	nucleus	39.91	39.22
HORVU1Hr1G049090.2	Barley	cytosol	40.79	39.08
EER92035	Sorghum	cytosol	41.23	39.0
Bra025995.1-P	Field mustard	cytosol	36.4	38.6
GSMUA_Achr5P10350_001	Banana	cytosol	39.91	38.56
EES00905	Sorghum	cytosol	39.91	38.4
HORVU5Hr1G058000.8	Barley	cytosol	39.04	38.36
Bra003645.1-P	Field mustard	cytosol	34.21	38.24
Bra035029.1-P	Field mustard	cytosol	36.4	38.07
Bra003647.1-P	Field mustard	cytosol	36.4	37.73
Bra016615.1-P	Field mustard	cytosol	35.96	37.44
Bra027842.1-P	Field mustard	cytosol	25.0	37.01
Zm00001d027557_P001	Maize	cytosol	41.23	37.01
Bra003644.1-P	Field mustard	cytosol	35.53	36.99
Bra026684.1-P	Field mustard	cytosol	35.53	36.99
Bra026681.1-P	Field mustard	cytosol	35.53	36.99
HORVU1Hr1G049070.1	Barley	cytosol	40.79	35.91
Bra038140.1-P	Field mustard	cytosol	35.09	35.71
Bra035031.1-P	Field mustard	cytosol	34.21	35.45
Bra026680.1-P	Field mustard	cytosol	33.77	35.16
Bra025994.1-P	Field mustard	cytosol	33.33	34.7
Bra026679.1-P	Field mustard	cytosol	33.33	34.7
Bra025993.1-P	Field mustard	cytosol	31.14	32.27
Bra034977.1-P	Field mustard	cytosol	31.14	31.28
Bra003648.1-P	Field mustard	cytosol	17.98	27.52
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	31.58	24.91
Bra008357.1-P	Field mustard	cytosol	9.65	19.3

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra016253	EnsemblPlants:Bra016253.1	EnsemblPlants:Bra016253.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0006749
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4DIC6	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002541915	:	:	:	:	:

Description

AT1G69920 (E=1e-101) ATGSTU12 | ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12); glutathione transferase

Coordinates

chrA07:-:18635999..18636931

Molecular Weight (calculated)

25151.0 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.046

Length

228 amino acids

Sequence
(BLAST)

001: MAQSGLNSTV KLLGTWGSPF ALRAQVALHL KSVEYEYMEE VLNSKSDLLL ESNPIYKKVP VLIHGDVSVC ESLNIVQYID ESWPSDPSIL PSHPSDRAFA
101: RFWAHFVDGK CFETINEVAG AKDNDVRMAM AGNLTDCLTS LEEAFQKSSK GGYLFGGENI GFLDIACGAM VGPLSVVEAF SGVKFLNEDT TPGMLQWAEK
201: FRAHEAVEPY LPTVAEFLEF AKKKFNVQ

Best Arabidopsis Sequence Match ( AT1G69920.1 )
(BLAST)

001: MLKNKKSDNS LSRDTLQIKK RKKTTMAQNG SNTTVKLIGT WASPFAIRAQ VALHLKSVEH EYVEETDVLK GKSDLLIKSN PIHKKVPVLI HGDVSICESL
101: NIVQYVDESW PSDLSILPTL PSERAFARFW AHFVDGKLFE SIDAVAGAKD DAARMTLAGN LMENLAALEE AFQKSSKGGD FFGGGNIGFV DITVGAIVGP
201: ISVIEAFSGV KFLRPDTTPG LIQWAEKFRA HEAVKPYMPT VAEFIEFAKK KFSV

Arabidopsis Description

GSTU12Glutathione S-transferase U12 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.