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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • mitochondrion 2
  • cytosol 4
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G189600.1 Wheat cytosol 92.02 92.41
TraesCS1A01G187000.1 Wheat cytosol 91.6 91.98
HORVU1Hr1G049070.1 Barley cytosol 100.0 91.89
TraesCS1B01G194900.1 Wheat cytosol 89.08 89.45
Zm00001d029696_P003 Maize cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.81 70.67
EER92034 Sorghum endoplasmic reticulum 65.13 66.81
Os10t0481300-01 Rice cytosol 56.3 65.69
Os10t0525800-00 Rice cytosol 59.24 64.68
Os10t0525500-01 Rice cytosol, plastid 37.82 62.5
Zm00001d027557_P001 Maize cytosol 64.71 60.63
Os10t0525400-01 Rice cytosol, plastid 59.24 57.79
PGSC0003DMT400058268 Potato cytosol 25.63 55.96
HORVU5Hr1G058000.8 Barley cytosol 53.36 54.74
Bra031708.1-P Field mustard cytosol 48.32 50.66
CDY34896 Canola cytosol 48.32 50.66
HORVU6Hr1G026810.3 Barley cytosol 48.74 50.43
AT1G10360.1 Thale cress cytosol 47.48 49.78
CDX93432 Canola cytosol 47.48 49.78
Bra019940.1-P Field mustard cytosol 47.06 49.34
CDY37984 Canola cytosol 47.06 49.34
HORVU3Hr1G112610.1 Barley cytosol 39.92 48.97
HORVU1Hr1G049190.2 Barley cytosol 48.74 48.95
AT1G10370.1 Thale cress cytosol 46.64 48.9
CDY37985 Canola cytosol 46.64 48.9
CDY45140 Canola cytosol 26.05 48.82
CDY07793 Canola cytosol 32.77 48.75
VIT_01s0026g01330.t01 Wine grape cytosol 47.48 48.71
VIT_01s0026g01340.t01 Wine grape cytosol 47.48 48.71
HORVU1Hr1G049160.3 Barley cytosol 47.06 47.46
HORVU4Hr1G076760.1 Barley cytosol 45.8 46.58
HORVU3Hr1G095620.1 Barley cytosol 45.38 46.55
HORVU3Hr1G064320.1 Barley cytosol 46.22 46.41
HORVU3Hr1G095730.1 Barley cytosol 45.38 46.15
HORVU3Hr1G095610.1 Barley cytosol 44.96 46.12
KRH69402 Soybean nucleus 44.96 46.12
HORVU1Hr1G049100.2 Barley cytosol 44.54 45.11
PGSC0003DMT400095775 Potato cytosol 36.55 45.08
HORVU3Hr1G095670.1 Barley cytosol 43.28 44.98
Solyc05g006730.2.1 Tomato mitochondrion 42.44 44.89
AT1G59700.1 Thale cress cytosol 44.12 44.87
Solyc05g006740.2.1 Tomato cytosol 40.34 44.86
PGSC0003DMT400058271 Potato cytosol 43.28 44.59
HORVU2Hr1G045200.1 Barley cytosol 44.96 44.4
KRH69404 Soybean nucleus 43.28 44.4
KRH74740 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 43.7 44.26
PGSC0003DMT400040670 Potato cytosol 42.86 44.16
HORVU7Hr1G027540.1 Barley cytosol 43.7 44.07
KRH69403 Soybean extracellular 24.79 44.03
KRH74742 Soybean nucleus 43.28 44.02
VIT_01s0026g01380.t01 Wine grape endoplasmic reticulum 47.9 43.68
Solyc05g006750.2.1 Tomato cytosol 42.02 43.67
AT1G27130.1 Thale cress cytosol 41.6 43.61
PGSC0003DMT400019934 Potato cytosol 39.92 43.38
CDX77247 Canola cytosol 40.76 43.3
Bra007889.1-P Field mustard mitochondrion 37.82 43.27
CDY56090 Canola mitochondrion 37.82 43.27
CDY45138 Canola cytosol 40.34 43.24
CDY16220 Canola cytosol 41.18 43.17
Solyc05g026210.1.1 Tomato nucleus 41.6 43.04
HORVU2Hr1G124310.1 Barley cytosol 38.66 42.79
CDY30898 Canola cytosol 42.02 42.73
Bra024659.1-P Field mustard cytosol 40.76 42.73
HORVU1Hr1G049230.2 Barley cytosol 43.28 42.56
CDY14704 Canola cytosol 40.76 42.54
HORVU1Hr1G049250.1 Barley cytosol 46.64 42.53
HORVU1Hr1G001560.6 Barley cytosol 41.6 42.49
Bra027840.1-P Field mustard cytosol 41.6 42.31
CDY11636 Canola mitochondrion 40.76 42.17
HORVU5Hr1G103430.2 Barley cytosol 39.08 41.89
Solyc05g026220.1.1 Tomato cytosol 28.15 41.88
Bra016252.1-P Field mustard cytosol 40.34 41.74
CDY30896 Canola cytosol 40.34 41.56
HORVU1Hr1G049210.1 Barley cytosol 45.38 41.38
CDY56091 Canola cytosol 39.92 41.3
CDY65968 Canola cytosol 39.92 41.3
HORVU1Hr1G049120.1 Barley cytosol 43.7 41.27
HORVU2Hr1G111840.5 Barley cytosol 46.22 41.2
Bra003970.1-P Field mustard cytosol 40.34 41.03
Bra016250.1-P Field mustard cytosol 40.34 41.03
CDY11635 Canola cytosol 40.34 41.03
CDY23533 Canola cytosol 40.34 41.03
CDY38775 Canola cytosol 40.34 41.03
CDY48383 Canola cytosol 40.34 41.03
CDY40288 Canola cytosol, plastid 39.08 40.97
HORVU1Hr1G049270.2 Barley cytosol 40.76 40.93
Bra007890.1-P Field mustard cytosol 39.5 40.87
Bra016253.1-P Field mustard cytosol 39.08 40.79
CDY11637 Canola mitochondrion 39.08 40.79
CDY38773 Canola cytosol 39.08 40.79
AT1G59670.1 Thale cress cytosol 39.92 40.77
HORVU3Hr1G024500.1 Barley cytosol 44.96 40.38
AT1G69930.1 Thale cress cytosol 39.5 40.17
HORVU2Hr1G052920.1 Barley cytosol 39.5 39.83
CDY28452 Canola cytosol 32.77 39.8
AT1G27140.1 Thale cress cytosol 39.92 39.09
Bra012422.1-P Field mustard cytosol 32.35 38.89
KRG99195 Soybean cytosol 23.11 38.73
HORVU3Hr1G002830.1 Barley cytosol 44.12 38.32
CDY25824 Canola cytosol 32.35 38.31
CDY38774 Canola cytosol 40.34 37.65
HORVU1Hr1G049260.4 Barley cytosol 38.66 37.4
HORVU7Hr1G108570.1 Barley mitochondrion 43.7 36.75
HORVU5Hr1G103420.1 Barley cytosol 37.82 36.44
Bra027842.1-P Field mustard cytosol 23.53 36.36
HORVU5Hr1G010740.1 Barley cytosol 42.86 36.3
AT1G69920.1 Thale cress cytosol 38.66 36.22
HORVU1Hr1G049280.1 Barley cytosol, plastid 45.38 35.64
HORVU2Hr1G124320.2 Barley cytosol 33.61 34.19
HORVU5Hr1G108660.1 Barley cytosol 17.23 34.17
HORVU5Hr1G092970.2 Barley cytosol 24.37 34.12
CDY23534 Canola cytosol, mitochondrion, plastid 26.05 33.88
HORVU2Hr1G124330.2 Barley cytosol 31.51 33.48
HORVU2Hr1G124300.3 Barley cytosol 31.51 33.33
HORVU6Hr1G090560.2 Barley plastid 40.76 32.66
PGSC0003DMT400091065 Potato cytosol 44.12 32.41
HORVU6Hr1G090600.6 Barley plastid 40.34 32.32
GSMUA_Achr1P23320_001 Banana endoplasmic reticulum, plasma membrane 37.82 31.14
HORVU3Hr1G111640.1 Barley cytosol 43.28 30.38
HORVU3Hr1G083520.1 Barley cytosol 27.31 25.59
HORVU2Hr1G122270.1 Barley cytosol, mitochondrion 35.71 24.64
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NEnsemblPlantsGene:HORVU1Hr1G049090EnsemblPlants:HORVU1Hr1G049090.2
InterPro:IPR004045InterPro:IPR010987UniProt:M0VRB0PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF488SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI00029665D5SEG:seg::::
Description
No Description!
Coordinates
chrchr1H:+:364323681..364324483
Molecular Weight (calculated)
25879.2 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.009
Length
238 amino acids
Sequence
(BLAST)
001: MSSEKQETTA AVRVLGRWPS PFVIRVLIAL GLKGVDHELV EEAMGNKSEL LLASNPVHKM IPVLLHHGRP VSESLIIVQY VDEAWSSHAP ALLPSDPYAR
101: AAERFWAQYV DDKFPTAIRV LRGRLGGDKD EAAVQVRAAL QRLEVALVEC GGGKDYFGGD GVGYLDIALG SHLGWIRAVE RIAEHRLLDE AKVPKLAAWA
201: DRFCAHPAVA GAMPGVERFV EFSVKNDGVL KAASANSK
Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)
001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
Arabidopsis Description
GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.