Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G574500.1 | Wheat | cytosol | 83.19 | 79.06 |
| TraesCS2D01G545400.1 | Wheat | cytosol | 82.32 | 78.24 |
| TraesCS2A01G544400.1 | Wheat | cytosol | 56.52 | 74.43 |
| Zm00001d029699_P002 | Maize | extracellular | 39.42 | 57.14 |
| EER92032 | Sorghum | cytosol | 38.55 | 56.36 |
| EER94615 | Sorghum | cytosol | 36.81 | 53.14 |
| HORVU1Hr1G049100.2 | Barley | cytosol | 34.49 | 50.64 |
| HORVU1Hr1G049120.1 | Barley | cytosol | 36.81 | 50.4 |
| HORVU1Hr1G049160.3 | Barley | cytosol | 34.2 | 50.0 |
| KXG39035 | Sorghum | cytosol | 34.2 | 49.17 |
| HORVU6Hr1G026810.3 | Barley | cytosol | 32.46 | 48.7 |
| HORVU1Hr1G049190.2 | Barley | cytosol | 33.33 | 48.52 |
| HORVU1Hr1G001560.6 | Barley | cytosol | 32.17 | 47.64 |
| HORVU2Hr1G052920.1 | Barley | cytosol | 31.3 | 45.76 |
| HORVU4Hr1G076760.1 | Barley | cytosol | 31.01 | 45.73 |
| HORVU1Hr1G049230.2 | Barley | cytosol | 31.59 | 45.04 |
| HORVU7Hr1G027540.1 | Barley | cytosol | 30.14 | 44.07 |
| HORVU2Hr1G045200.1 | Barley | cytosol | 29.57 | 42.32 |
| HORVU1Hr1G049210.1 | Barley | cytosol | 31.3 | 41.38 |
| HORVU3Hr1G112610.1 | Barley | cytosol | 23.19 | 41.24 |
| HORVU1Hr1G049250.1 | Barley | cytosol | 30.72 | 40.61 |
| HORVU3Hr1G064320.1 | Barley | cytosol | 27.25 | 39.66 |
| HORVU2Hr1G111840.5 | Barley | cytosol | 30.43 | 39.33 |
| HORVU3Hr1G024500.1 | Barley | cytosol | 30.14 | 39.25 |
| HORVU1Hr1G049270.2 | Barley | cytosol | 26.96 | 39.24 |
| HORVU3Hr1G095730.1 | Barley | cytosol | 26.38 | 38.89 |
| HORVU5Hr1G058000.8 | Barley | cytosol | 25.51 | 37.93 |
| HORVU3Hr1G095670.1 | Barley | cytosol | 24.93 | 37.55 |
| HORVU3Hr1G095620.1 | Barley | cytosol | 24.93 | 37.07 |
| HORVU3Hr1G095610.1 | Barley | cytosol | 24.35 | 36.21 |
| HORVU1Hr1G049260.4 | Barley | cytosol | 25.8 | 36.18 |
| HORVU6Hr1G090560.2 | Barley | plastid | 31.01 | 36.03 |
| HORVU1Hr1G049090.2 | Barley | cytosol | 24.64 | 35.71 |
| HORVU6Hr1G090600.6 | Barley | plastid | 30.14 | 35.02 |
| HORVU1Hr1G049280.1 | Barley | cytosol, plastid | 30.14 | 34.32 |
| HORVU3Hr1G002830.1 | Barley | cytosol | 27.25 | 34.31 |
| HORVU5Hr1G103430.2 | Barley | cytosol | 21.45 | 33.33 |
| HORVU1Hr1G049070.1 | Barley | cytosol | 24.64 | 32.82 |
| HORVU2Hr1G124310.1 | Barley | cytosol | 20.0 | 32.09 |
| HORVU7Hr1G108570.1 | Barley | mitochondrion | 26.09 | 31.8 |
| HORVU5Hr1G108660.1 | Barley | cytosol | 11.01 | 31.67 |
| HORVU5Hr1G092970.2 | Barley | cytosol | 15.36 | 31.18 |
| HORVU5Hr1G010740.1 | Barley | cytosol | 25.22 | 30.96 |
| HORVU2Hr1G124320.2 | Barley | cytosol | 20.29 | 29.91 |
| HORVU2Hr1G124330.2 | Barley | cytosol | 19.42 | 29.91 |
| HORVU5Hr1G103420.1 | Barley | cytosol | 20.29 | 28.34 |
| HORVU2Hr1G124300.3 | Barley | cytosol | 17.39 | 26.67 |
| HORVU3Hr1G111640.1 | Barley | cytosol | 25.22 | 25.66 |
| HORVU3Hr1G083520.1 | Barley | cytosol | 14.78 | 20.08 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | UniProt:A0A287JQQ7 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU2Hr1G122270 | EnsemblPlants:HORVU2Hr1G122270.1 | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF13417 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF499 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI000B470BD7 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:752926910..752928484
Molecular Weight (calculated)
37840.2 Da
IEP (calculated)
7.112
GRAVY (calculated)
0.201
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGDNLKLV GMWASPHVLR VGLALRLKGL SYKFVEMEGE EGFKNNQGEQ LLLNSKLQVL IHGGKSIGGT SLSMIQYIDE XGARPPLLPD DPSERAMARY
101: WADFIDDTLV RAMHKAAWGE SDREKAEGKN HVVSAVETLE GALRDCSKPF FGGNSVGYVD VVLGGLLGWV RATDTVQGVK TFDDPAITPL LAMWAYRFDA
201: LKTVQVVMPD VGALVDFAMT MPSHSSGRLG IVVSIYLIAV LLQAVASYLT WLGRAESKGE PQDGNPCSRL QWLVPRALPY WSCYVLEGLD FVTRSMPTLF
301: LLYVFVKGFK SSIVRVLVMG VPVVVITWYF LTFYKPCGHG TLNII
101: WADFIDDTLV RAMHKAAWGE SDREKAEGKN HVVSAVETLE GALRDCSKPF FGGNSVGYVD VVLGGLLGWV RATDTVQGVK TFDDPAITPL LAMWAYRFDA
201: LKTVQVVMPD VGALVDFAMT MPSHSSGRLG IVVSIYLIAV LLQAVASYLT WLGRAESKGE PQDGNPCSRL QWLVPRALPY WSCYVLEGLD FVTRSMPTLF
301: LLYVFVKGFK SSIVRVLVMG VPVVVITWYF LTFYKPCGHG TLNII
001: MATEDVKLIG SWASVYVMRA RIALHLKSIS YEFLQETYGS KSELLLKSNP VHKKMPVLIH ADKPVCESNI IVHYIDEAWN SSGPSILPSH PYDRAIARFW
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA
101: AAYIDDQWFI SVRSILTAQG DEEKKAAIAQ VEERTKLLEK AFNDCSQGKP FFNGDHIGYL DIALGSFLGW WRVVELDANH KFLDETKTPS LVKWAERFCD
201: DPAVKPIMPE ITKLAEFARK LFPKRQA
Arabidopsis Description
GSTU18Glutathione S-transferase U18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.