Factsheet for PGSC0003DMT400040670

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006730.2.1	Tomato	mitochondrion	88.74	91.11
PGSC0003DMT400058271	Potato	cytosol	76.62	76.62
VIT_01s0026g01340.t01	Wine grape	cytosol	69.26	68.97
VIT_01s0026g01330.t01	Wine grape	cytosol	67.1	66.81
PGSC0003DMT400058268	Potato	cytosol	30.3	64.22
AT1G10370.1	Thale cress	cytosol	61.47	62.56
Bra019940.1-P	Field mustard	cytosol	61.47	62.56
Bra031708.1-P	Field mustard	cytosol	61.47	62.56
CDY34896	Canola	cytosol	61.47	62.56
CDX93432	Canola	cytosol	61.04	62.11
CDY37985	Canola	cytosol	60.61	61.67
CDY37984	Canola	cytosol	60.61	61.67
CDY07793	Canola	cytosol	41.99	60.62
AT1G10360.1	Thale cress	cytosol	59.31	60.35
PGSC0003DMT400095775	Potato	cytosol	45.89	54.92
PGSC0003DMT400019934	Potato	cytosol	51.95	54.79
GSMUA_Achr1P03800_001	Banana	cytosol	51.52	52.42
GSMUA_Achr5P10350_001	Banana	cytosol	53.25	52.12
GSMUA_Achr5P10340_001	Banana	cytosol	51.95	51.72
GSMUA_Achr5P10360_001	Banana	cytosol	53.25	51.46
Os10t0525800-00	Rice	cytosol	47.19	50.0
Os10t0481300-01	Rice	cytosol	43.72	49.51
KRG99195	Soybean	cytosol	30.3	49.3
Os10t0525500-01	Rice	cytosol, plastid	29.87	47.92
EER92036	Sorghum	cytosol	48.05	47.23
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.45	46.67
EER92035	Sorghum	cytosol	48.05	46.06
TraesCS1B01G194900.1	Wheat	cytosol	46.75	45.57
EER92034	Sorghum	endoplasmic reticulum	45.45	45.26
TraesCS1D01G189600.1	Wheat	cytosol	45.02	43.88
TraesCS5D01G200100.1	Wheat	cytosol	43.72	43.72
TraesCS5A01G190900.1	Wheat	cytosol	43.72	43.72
EES00905	Sorghum	cytosol	44.59	43.46
TraesCS1A01G187000.1	Wheat	cytosol	44.59	43.46
TraesCS5B01G192400.1	Wheat	cytosol	43.29	43.29
HORVU1Hr1G049090.2	Barley	cytosol	44.16	42.86
PGSC0003DMT400079841	Potato	cytosol	40.69	42.73
PGSC0003DMT400079839	Potato	cytosol	40.26	42.27
Os10t0525400-01	Rice	cytosol, plastid	44.59	42.21
PGSC0003DMT400037996	Potato	cytosol	39.83	41.82
PGSC0003DMT400071057	Potato	cytosol	39.39	41.55
PGSC0003DMT400092412	Potato	cytosol	38.1	40.18
Zm00001d027557_P001	Maize	cytosol	44.16	40.16
HORVU5Hr1G058000.8	Barley	cytosol	40.26	40.09
PGSC0003DMT400037994	Potato	cytosol	38.1	40.0
PGSC0003DMT400037990	Potato	cytosol	38.1	40.0
PGSC0003DMT400079842	Potato	cytosol	38.1	39.64
PGSC0003DMT400037986	Potato	cytosol	35.5	39.42
HORVU1Hr1G049070.1	Barley	cytosol	44.16	39.38
PGSC0003DMT400079840	Potato	cytosol	35.06	39.32
PGSC0003DMT400071059	Potato	cytosol	36.8	38.64
PGSC0003DMT400091065	Potato	cytosol	52.81	37.65
PGSC0003DMT400054729	Potato	cytosol	35.93	37.56
PGSC0003DMT400038054	Potato	endoplasmic reticulum	35.5	37.44
PGSC0003DMT400094585	Potato	cytosol	35.5	37.1
PGSC0003DMT400020286	Potato	cytosol	31.6	35.78
PGSC0003DMT400020098	Potato	cytosol	33.77	30.71
PGSC0003DMT400001779	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.94	30.64
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	35.93	28.72

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102599652	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1BA75	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400015726	PGSC:PGSC0003DMG400015726
EnsemblPlants:PGSC0003DMT400040670	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295B543	RefSeq:XP_006341310.1	SEG:seg	:

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400015726]

Coordinates

chr12:+:37120892..37123572

Molecular Weight (calculated)

26033.4 Da

IEP (calculated)

7.931

GRAVY (calculated)

-0.148

Length

231 amino acids

Sequence
(BLAST)

001: MARNDLKILG AWPSPYVMRT RIALNIKSLA YDFLEEQFGT KSELLLKSNP IYKKIPVLIH DGKPICESLI IVQYIDENWT NFGHSILPSH PYDRAIARFW
101: ASYIDDKWFP ALRGVAATQE ENAKKAATET VIEGLVLLED VFKNCSKGKK FFGGDKIGYL DIALGCFLGW LKVNEKLNNV NLLDESKTPG LYKWAEDFCG
201: DSVVKDVMPE TDKLAQAAKV IWAKIRAQAS S

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.